information on T3E15
(109374..108886)
Direction: -
Frame: 1
ORF
109782..108769 (Met: 109617 109281 109164 109161 108858)
DPLNSVDAEYLRSLVVESRRVIELEQARYEQQQANEEAGGSKKLKRKLRDETETPMTQRK
KVCEPEASKTQRRSKGDEASASKTERRKKSEVEAPKKPKKVFEISDEDEDDDDEEDDDGD
NGADDVDDDEDNGKSSKPKKRRQYSKVWNDFIVIKKVNHLGKTEERAMCKHCKSDFAYNA
HKNGTNTYRHHLQICKLVPRNGDISQMMVNAVAKFQARKIDQSVFRELVAKTIIQHDLPF
SYVEYERVRETWKYLNADVKFFSRNTAAADIYKFYEIETDKLKRELAQLPGRISLITDLW
SALTHEGYMCLTAHYIDRNWKLNNKILVFVHSLHRIQE
GenBank annotation
None
BLASTX cluster
109374..107357 cluster 35 8 hits for protein gene
BLASTN cluster
None
GENSCAN
118848..101808 gene model 27
Grail
109782..108766 exon Phase: 0 Score: 90
Exon-Intron boundary candidatates
| Acceptor |
| 108771 [0.006] (0) |
108829 [0.040] (2) |
108845 [0.031] (1) |
108863 [0.001] (1) |
| 108890 [0.381] (1) |
108974 [0.003] (1) |
108983 [0.003] (1) |
108994 [0.004] (2) |
| 109148 [0.007] (1) |
109164 [0.035] (0) |
109259 [0.003] (1) |
109314 [0.002] (0) |
| 109436 [0.003] (1) |
109439 [0.001] (1) |
109460 [0.001] (1) |
109468 [0.003] (2) |
| 109529 [0.002] (1) |
109586 [0.002] (1) |
109608 [0.003] (0) |
109667 [0.015] (1) |
| 109739 [0.94N/0.007] (1) |
109782 [0.313] (0) |
| Donor |
| 108864 [0.059] (1) |
109099 [0.019] (0) |
109159 [0.007] (0) |
109200 [0.084] (1) |
| 109233 [1.00N/0.152] (1) |
109315 [0.93N/0.149] (0) |
109345 [0.009] (0) |
109517 [0.009] (2) |
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Entrance