information on T27D20
(54358..54216)
Direction: -
Frame: 1
ORF
54388..54023 (Met: 54376 54364)
LEIRMVNNMQGSFTSTGLVVSSKLPRFSDQYTLTIDSADPQSISAGKSVQFTKSVTQWSL
SFCIFHTRAHTISFALRKLLILFLYVYSRLTKDGVLVEGLFWKDVEALVKEYTEAGEPKK
KR
GenBank annotation
55721..54020 T27D20.11
BLASTX cluster
55721..54184 cluster 10 1 hits for protein gene
BLASTN cluster
55478..54060 cluster 3 3 hits for EST
GENSCAN
55721..54023 gene model 11
Grail
54122..54020 exon Phase: 2 Score: 86
54358..54020 exon Phase: 0 Score: 88
Exon-Intron boundary candidatates
| Acceptor |
| 54042 [0.007] (1) |
54048 [0.001] (1) |
54069 [0.001] (1) |
54078 [0.022] (1) |
| 54122 [1.00N/0.376] (2) |
54278 [0.011] (2) |
54298 [0.018] (0) |
54311 [0.001] (2) |
| 54358 [1.00N/0.730] (0) |
| Donor |
| 54138 [0.005] (2) |
54160 [0.114] (1) |
54216 [0.95N/0.010] (2) |
54245 [0.007] (0) |
| 54332 [0.009] (0) |
54340 [0.010] (1) |
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Entrance