information on T27D20
(40097..40331)
Direction: +
Frame: 2
ORF
39878..40336 (Met: 40031 40052 40088 40094 40097 40301)
SKKNIYIYIVNFVLHQQVCQKVIQQVLGFLVLIFLFYCCGTLISLLFLSKHMSVLGNTMG
EAAEIPQNTVMQMMATLTEELRGLRKRLGRLEQPYPRVELGQDQARRNAREEAEEFPDLD
DEDDPPPDPLRRQHQRREDPLMRNRARGVEPRE
GenBank annotation
40097..41244 T27D20.19
BLASTX cluster
None
BLASTN cluster
None
GENSCAN
40052..46670 gene model 9
Suboptimal exon
40088..40331 Init Phase: 0 Score: 0.195
40097..40331 Init Phase: 0 Score: 0.298
Grail
40038..40339 exon Phase: 1 Score: 77
Exon-Intron boundary candidatates
| Acceptor |
| 39926 [0.048] (0) |
39960 [0.001] (1) |
40028 [0.033] (0) |
40038 [0.96N/0.072] (1) |
| 40044 [0.94N/0.721] (1) |
40065 [0.009] (1) |
40068 [0.003] (1) |
40132 [0.004] (2) |
| 40143 [0.002] (1) |
40157 [0.008] (0) |
40168 [0.026] (2) |
40190 [0.003] (0) |
| 40198 [0.001] (2) |
40245 [0.002] (1) |
| Donor |
| 39940 [0.008] (0) |
39959 [0.255] (1) |
39967 [0.005] (0) |
39995 [0.068] (1) |
| 40084 [0.005] (0) |
40331 [0.010] (1) |
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