information on T10M13
(89600..89767)
Direction: +
Frame: 2
ORF
86906..89779 (Met: 86909 86915 86936 86960 86963 87737 87875 87878 87893 88649 89057 89105 89564 89573 89603 89621 89684 89717)
YMTMDSEGVLMPLVHEHLMMPWNDLRKGDCCGLSKAVSVGYYCKSCDFFAHKKCGESSEF
IQHPSHPNHTLQLRSSEGCNSCNLCGRTISDLFYRCDLCDFDVDLYCAKYPPPEVIDIPE
THHHKLNLHKELIEFNCDAKCGKITGAEFPYVCYECQLPFHVDCVWRPSELKHPSEVNHS
YHSLHPLKLLSGQLPDNCDGKCRLCARKIDDRLFYHCSPCNFTLDLRCVLNPPQQSLLNL
KAHDHQLTLLPRLLSFTCNACGLNGDRSPYTCVQCDFMIHQDCLDLPRVININQHDHRVS
RTSVPGVGNSKGVLLPWFHRKHIMMPWNDMRKGDCCGSLESVTDGFYCKSCDIFIHKKCG
ESSGIIDHSSHPDHTLELNRYPNKSCNLCGRSKGVNVCYRCDHCYYQLDLYCAKYPPPEF
IDIPETHHHKLTLLKERIEFDCDAKCGETGDGFAYKCPECDLFFHVDCVWHPPEVNHPLE
VNHSYHPWHPLKLHTGQPPHYSDGTCRLCARNIDDRLFYHCSPCNFTLDLRCVLNPPPQS
LLNLKAHDHQLILLPRLRSFTCNACGLSGDRSPYICIQCDFMIHQDCLDLPRLINVNRHD
HRVSRTSVLGVVNSVCGVCHQKVDWTCGGFSCQRCSSYVVHSKCATRRDVWNGKELEGVP
EEIEDIEPYVVIDDNTIQHFSHKEHYLRLHVNDVLCNDNKRCKACTHPIFLQSFYSCMDC
DFLLHQNCAGFPRMKRHVLHNERLTLVTNETKLFQCAPCDRWSNGFRYQHGYKSLDLQCG
SISEPFVHPSHPDHPLYHTLLDGRNEICDGCKKSWYYVLSCIEDDCRFVLCFKCLTLPQV
VKHRVDDDPLLLCYGEKACGKYWCDICEKETNPETWFYTCKDHQSSMHTMCVLGDSVGIM
PKSTIMGWYKYYEVVLNNSISRPVCEMCKSRCIFPTIMKILEASNEYVCSLACVLERG
GenBank annotation
86229..89782 T10M13.17
BLASTX cluster
86915..95613 cluster 12 27 hits for protein gene
BLASTN cluster
None
GENSCAN
86229..89779 gene model 17
Suboptimal exon
86915..89779 Sngl Phase: 0 Score: 0.256
Grail
None
Exon-Intron boundary candidatates
Acceptor |
86906 [0.93N/0.064] (0) |
87040 [0.003] (2) |
87480 [0.012] (1) |
87839 [0.002] (0) |
87865 [0.093] (2) |
87955 [0.001] (2) |
88078 [0.008] (2) |
88086 [0.001] (1) |
88326 [0.002] (1) |
88344 [0.001] (1) |
88392 [0.003] (1) |
88542 [0.006] (1) |
88769 [0.019] (0) |
88772 [0.052] (0) |
88805 [0.067] (0) |
88807 [0.001] (2) |
88816 [0.003] (2) |
88846 [0.025] (2) |
88849 [0.001] (2) |
88923 [0.004] (1) |
88948 [0.002] (2) |
89053 [0.005] (2) |
89113 [0.004] (2) |
89171 [0.010] (0) |
89188 [0.037] (2) |
89206 [0.147] (2) |
89240 [0.004] (0) |
89386 [0.002] (2) |
89513 [0.005] (0) |
89550 [0.001] (1) |
89598 [0.218] (1) |
89676 [0.013] (1) |
89723 [0.001] (0) |
89760 [0.008] (1) |
Donor |
86987 [0.284] (1) |
87013 [0.040] (0) |
87023 [0.004] (1) |
87140 [0.033] (1) |
87247 [0.016] (0) |
87314 [0.003] (1) |
87358 [0.74N/0.040] (0) |
87433 [0.95N/0.686] (0) |
87479 [0.94N/0.328] (1) |
87677 [0.005] (1) |
87728 [0.008] (1) |
88077 [0.005] (2) |
88085 [0.132] (1) |
88093 [0.038] (0) |
88260 [0.055] (2) |
88283 [0.004] (1) |
88345 [0.92N/0.064] (0) |
88391 [0.99N/0.564] (1) |
88610 [0.005] (1) |
88747 [0.015] (0) |
88771 [0.006] (0) |
88790 [0.027] (1) |
88915 [0.028] (0) |
89054 [0.011] (1) |
89205 [0.095] (2) |
89349 [0.057] (2) |
89483 [0.063] (1) |
89493 [0.004] (2) |
89543 [0.005] (1) |
89561 [0.011] (1) |
89624 [0.039] (1) |
89628 [0.74N/0.052] (2) |
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