information on T10M13
(33922..38889)
Direction: +
Frame: 1
ORF
33808..38931 (Met: 33952 34017 34073 34091 34097 34223 34478 34706 34779 34838 35096 35336 35507 35599 35678 35714 35981 35984 36100 36207 36219 36336 36357 37104 37301 37313 37517 37529 37613 37722 37910 38024 38042 38045 38123 38144 38192 38234 38341 38359 38781 33985 34065 34130 34156 34164 34280 34378 34386 34493 34564 34623 34634 34672 34698 34709 34720 34830 34850 34969 35019 35579 35608 35628 35735 35746 35847 36005 36019 36033 36041 36196 36222 36230 36247 36453 36809 36817 36900 36929 37003 37053 37067 37093 37164 37319 37393 37413 37460 37465 37506 37661 37714 37731 38306 38518 38637 38666 38758 38832 38837)
FCEKINWRPGQKSAWKSGSGFLVKLINFHLYDFVAFFQRQWWEFKAKHMDKVVFFKVER*
TYFVITYLLMGDSRINGLLLWQADG*SMSFLRWMHMSELRNWIYNT*VTVCYDS*R*HLK
TSVKNVKKPKIWHQIMLKGFFSLVLHYKFLLYCL*YLSLQAPDICIYFVGRATSLWISGE
EFFCKH*N*RKVCFQKYSNSSSSVIYFLLRVEKLHSWQMLYFG*IKLIELNGTGLSGFSC
RTNRNT*SWSNAEKRQVPRIKYVPL*LI*GIISSSQFVCS*LKFVHFG*PM*KL*GRAHS
DRTSVFIGCEARSMCSCYKRHADRWGDAIN*RMHLI*ALTEGGESLTNPTAEHNFGVCLV
DVATQKIILGQVSSS*NGTWLHLYVTFLGVY*AFFFHSYQFKDDQDCSALSCLLSEMRPV
EIIKPAKVLSYATERTIVRQTRNPLVNNLVPLSEFWDSEKTIYEVGIIYKRINCQPSSAY
SSEGKILGDGSSFLPKMLSELATEDKNGSLALSALGGAIYYLRQAFLDESLLRFAKFESL
PYCDFSNVNEKQHMVLDAAALENLEIFENSRNGGYSG*FLYLTMYY*IIDVF*LECCLLK
NAVCSTESMYHCIWETVTENMAGKTFI*RN*KERQDAVAILRVSLSTSCLTLLLSFLCLS
TRQ*WHLGFTFDHFSCLFRYPWISPQNYTISPLWVFKTIFATVSLAKMMFSYAFN*IYF*
LIP*L*LTLLLQHVKAFVYTIHLTMYYGTVPSLRVKIFRTHWNSGSRCPDFQTWNG*ARM
FSSM*D*RLRC*LTLYVYTKDLLNIFVKLVLRVIVKLVEEMAIKWCYMKIQLRSRYRNSY
QLYVVVKQWQKHALLSVLS*HDTSRRLLHLLTPGIINLLHIHILILANCTASHIISLPGQ
SLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRK
LLGDASVRITSLFFFTP*G*NRGFSDQIFGALLSSYPDKLCYSWKR*TSWKFLKV*GSVP
HDYELCSSKKVKVVPSFTF*KLAFRFRHNKSIVFS*AVC*YLLYRDP*LNMRFSYFLLSF
RVSLDIGLLP*KLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAGMDKFM
F*KKNCLRNFQHLPSEYVSCLSNSC*TVTQC*LWVVAWTLFVVNIC**RIEFDPTLYRLS
*VGMQKKMNLRQTYSSITSYKQEVSWVEDCFIELGMQTTLHLDLYVDTFLT*SFYCRAGR
VDQPRFCK*LMKE*CRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGA
EKASFILLTGPNMGGKSTLLRQVCLAVILAQVSYHLKKLCRQWALTRLILMKETQAMMIF
SQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLVSNVHSVCQIDY
MKLSKINVKLATVVTLLRVGHRLC*YANANKRTDRMFYINNMQTSATRNSLVVLDELGRG
TATSDGQAIAYVESIIAYHVFWDLLLLFTLSKIS*IYRESVLEHFIEKVQCRGFFSTHYH
RLSVDYQTNPKVL*SVCFSFWV*DLRTINNNLIVCVHSETCQKPISLEYLFG*LTLPYGM
SNRRRNRWSRRSYISL**PGACPKSYGVNVARLAGKNTEFSTPSPLLS
GenBank annotation
32344..39195 T10M13.8
BLASTX cluster
34057..38889 cluster 6 6 hits for protein gene
BLASTN cluster
None
GENSCAN
27749..39192 gene model 7
Suboptimal exon
33922..33975 Intr Phase: 0 Score: 0.373
34057..34134 Intr Phase: 0 Score: 0.125
38287..38444 Intr Phase: 0 Score: 0.397
Grail
None
Exon-Intron boundary candidatates
| Acceptor |
| 33836 [0.005] (1) |
33922 [0.95N/0.201] (0) |
34031 [0.83N/0.017] (1) |
34060 [1.00N/0.236] (0) |
| 34163 [0.006] (1) |
34301 [0.001] (1) |
34328 [0.86N/0.871] (1) |
34397 [0.001] (1) |
| 34409 [0.099] (1) |
34417 [0.003] (0) |
34426 [0.002] (0) |
34458 [0.028] (2) |
| 34496 [0.003] (1) |
34526 [1.00N/0.363] (1) |
34542 [0.087] (2) |
34557 [0.018] (2) |
| 34650 [0.003] (2) |
34712 [0.006] (1) |
34726 [0.028] (0) |
34762 [0.94N/0.969] (0) |
| 34771 [0.017] (0) |
34787 [0.074] (1) |
34799 [0.009] (1) |
34868 [0.001] (1) |
| 34898 [0.003] (1) |
34939 [0.005] (0) |
34957 [0.013] (0) |
35048 [0.86N/0.067] (1) |
| 35054 [0.044] (1) |
35064 [0.004] (2) |
35071 [0.056] (0) |
35124 [0.023] (2) |
| 35148 [0.003] (2) |
35293 [0.002] (0) |
35310 [0.002] (2) |
35352 [0.006] (2) |
| 35374 [0.001] (0) |
35485 [0.025] (0) |
35504 [0.002] (1) |
35557 [0.009] (0) |
| 35637 [0.047] (2) |
35654 [0.134] (1) |
35918 [0.002] (1) |
36064 [0.93N/0.014] (0) |
| 36073 [0.002] (0) |
36129 [0.65N/0.013] (2) |
36319 [0.94N/0.242] (0) |
36324 [0.012] (2) |
| 36328 [0.003] (0) |
36363 [0.005] (2) |
36369 [0.004] (2) |
36380 [0.017] (1) |
| 36386 [0.003] (1) |
36426 [0.011] (2) |
36472 [0.002] (0) |
36549 [0.002] (2) |
| 36573 [0.121] (2) |
36617 [0.001] (1) |
36636 [0.051] (2) |
36639 [0.010] (2) |
| 36727 [0.015] (0) |
36843 [0.033] (2) |
36874 [0.94N/0.141] (0) |
36890 [0.134] (1) |
| 36899 [0.002] (1) |
36976 [0.001] (0) |
37086 [0.001] (2) |
37136 [0.78N/0.586] (1) |
| 37182 [0.001] (2) |
37351 [0.002] (0) |
37364 [0.007] (1) |
37416 [0.001] (2) |
| 37499 [0.126] (1) |
37509 [0.001] (2) |
37515 [0.158] (2) |
37523 [0.003] (1) |
| 37540 [0.001] (0) |
37544 [0.027] (1) |
37605 [0.002] (2) |
37611 [0.050] (2) |
| 37680 [1.00N/0.960] (2) |
37682 [0.001] (1) |
37699 [0.010] (0) |
37728 [0.003] (2) |
| 37800 [0.031] (2) |
37830 [0.001] (2) |
37834 [0.009] (0) |
37862 [0.002] (1) |
| 37866 [0.022] (2) |
37902 [0.024] (2) |
37967 [0.022] (1) |
37996 [0.025] (0) |
| 38060 [0.96N/0.718] (1) |
38070 [0.065] (2) |
38151 [0.099] (2) |
38172 [0.004] (2) |
| 38240 [0.003] (1) |
38249 [0.001] (1) |
38271 [0.002] (2) |
38299 [0.014] (0) |
| 38365 [0.96N/0.811] (0) |
38372 [0.035] (1) |
38399 [0.003] (1) |
38531 [0.95N/0.979] (1) |
| 38557 [0.001] (0) |
38562 [0.003] (2) |
38761 [0.96N/0.870] (0) |
38792 [0.024] (1) |
| 38835 [0.004] (2) |
| Donor |
| 33835 [0.96N/0.479] (1) |
33859 [0.023] (1) |
33873 [0.025] (0) |
33963 [0.004] (0) |
| 33975 [0.93N/0.549] (0) |
34063 [0.046] (1) |
34134 [1.00N/0.970] (0) |
34140 [0.003] (0) |
| 34162 [0.92N/0.007] (1) |
34233 [0.015] (0) |
34369 [0.006] (1) |
34396 [0.194] (1) |
| 34595 [0.636] (2) |
34609 [1.00N/0.895] (1) |
34776 [0.021] (0) |
34911 [0.012] (0) |
| 34956 [0.96N/0.900] (0) |
34977 [0.87N/0.267] (0) |
34984 [0.013] (1) |
34997 [0.90N/0.021] (2) |
| 35128 [0.74N/0.005] (1) |
35182 [0.009] (1) |
35309 [0.008] (2) |
35509 [0.014] (1) |
| 35577 [1.00N/0.372] (0) |
35600 [0.014] (2) |
35701 [0.010] (1) |
35783 [1.00N/0.693] (2) |
| 36193 [0.012] (1) |
36204 [0.99N/0.794] (0) |
36220 [0.93N/0.862] (1) |
36379 [0.260] (1) |
| 36497 [1.00N/0.045] (2) |
36572 [0.112] (2) |
36684 [0.063] (0) |
36775 [0.74N/0.080] (1) |
| 36975 [1.00N/0.463] (0) |
37051 [0.064] (1) |
37298 [0.92N/0.726] (2) |
37576 [0.011] (1) |
| 37729 [0.038] (1) |
37744 [0.014] (1) |
37817 [0.010] (2) |
37939 [0.005] (1) |
| 37951 [0.012] (1) |
37966 [1.00N/0.987] (1) |
38188 [0.073] (1) |
38197 [1.00N/0.949] (1) |
| 38201 [0.026] (2) |
38444 [0.95N/0.791] (2) |
38561 [0.006] (2) |
38630 [0.97N/0.067] (2) |
| 38662 [0.012] (1) |
38882 [0.020] (2) |
38890 [1.00N/0.386] (1) |
[help]
Entrance