information on L73G19
(29987..29958)
Direction: -
Frame: 1
ORF
30311..29094 (Met: 30263 30221 30008 29456 29444 29225)
SVVSFRRRSPKKKVKEMERLVSGETTTSSNMKKKKKKVSSTTNPSLPDDLVLVIIARVSI
LYYPILSLVSKSFRSLLASPELYKVRSLLGRRESRLYVCINMYSYKNGPSWFTLCRKPDR
TTTSSNKEEDRSSGYVLARIPIPHSPLTQRYSLAAVGSNIYNIGVTRYHHLTSSSVWVLD
CRSHTWRQAPSLPVELFRVSVSVLDQKIYVAGLHQEDGSDSLKNSVTVLDTETQVSDRVA
IPCSVSQGKEIFISTSVGGKVNLVTGRKVVDYNPVEGSWEEVGDTMCEFMFSKCFCVVGN
VLYSCAIDRVFRWYDTEVRTWRNLECLIGGRLPKLSPRAFVSLADYGGKLAVFWNQGVGD
WQMLWCAVIALERRNTCEILGNVEWSDHVLHVPKIRSYYNALSATL
GenBank annotation
30263..29091 L73G19.90
BLASTX cluster
30176..29094 cluster 6 34 hits for protein gene
BLASTN cluster
None
GENSCAN
37450..24398 gene model 8
Suboptimal exon
30278..29094 Term Phase: 0 Score: 0.849
Grail
29376..29091 exon Phase: 2 Score: 64
29680..29091 exon Phase: 1 Score: 58
29982..29091 exon Phase: 2 Score: 32
30263..29091 exon Phase: 0 Score: 84
Exon-Intron boundary candidatates
Acceptor |
29209 [0.019] (1) |
29225 [0.012] (0) |
29242 [0.065] (1) |
29264 [0.001] (0) |
29286 [0.003] (2) |
29326 [0.015] (1) |
29376 [0.86N/0.003] (2) |
29507 [0.001] (0) |
29580 [0.002] (2) |
29617 [0.012] (1) |
29642 [0.001] (0) |
29662 [0.002] (1) |
29677 [0.803] (1) |
29680 [0.003] (1) |
29787 [0.012] (2) |
29811 [0.005] (2) |
29856 [0.001] (2) |
29864 [0.005] (0) |
30054 [0.079] (2) |
30059 [0.004] (0) |
Donor |
29218 [0.006] (2) |
29361 [0.389] (0) |
29374 [0.024] (2) |
29453 [0.474] (1) |
29455 [0.81N/0.171] (2) |
29469 [0.611] (0) |
29483 [0.644] (1) |
29508 [0.019] (0) |
29532 [0.092] (0) |
29610 [0.362] (0) |
29712 [0.004] (0) |
29733 [0.033] (0) |
29847 [0.84N/0.031] (0) |
29912 [0.006] (1) |
29920 [0.388] (2) |
29939 [0.009] (1) |
30021 [0.011] (0) |
30055 [0.204] (2) |
30060 [0.93N/0.144] (0) |
30156 [0.005] (0) |
30162 [0.015] (0) |
30201 [0.029] (0) |
30252 [0.007] (0) |
30256 [0.033] (2) |
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