information on F19B15
(45765..46325)
Direction: +
Frame: 3
ORF
45063..46859 (Met: 45135 45156 45249 45351 45360 45384 45594 45699 46509 46566 46854)
NEFSCWQTNFLYPGGKEVLLKAVAMALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEA
KGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKS
DPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQR
VPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWD
YTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSN
SLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLGGEWADSI
YVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEE
WRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEV
KWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDEIWPSLK
PTIQDLQRLLSQFTEVKFVFIPREGNTLAERVARESLSFLNYDPKLYSIVPSWARSSMD
GenBank annotation
45135..46862 F19B15.120
BLASTX cluster
45048..50455 cluster 7 14 hits for protein gene
BLASTN cluster
None
GENSCAN
45594..46859 gene model 11
16639..19279 gene model 5
Suboptimal exon
45135..45186 Init Phase: 0 Score: 0.132
45135..46859 Sngl Phase: 0 Score: 0.181
45445..46859 Term Phase: 1 Score: 0.161
Grail
45384..46046 exon Phase: 0 Score: 85
46471..46590 exon Phase: 1 Score: 33
46627..46862 exon Phase: 1 Score: 60
Exon-Intron boundary candidatates
Acceptor |
45106 [0.001] (1) |
45211 [0.005] (1) |
45313 [0.002] (1) |
45319 [0.006] (1) |
45334 [0.003] (1) |
45376 [0.003] (1) |
45393 [0.001] (0) |
45407 [0.006] (2) |
45473 [0.001] (2) |
45500 [0.003] (2) |
45504 [0.75N/0.367] (0) |
45551 [0.001] (2) |
45565 [0.002] (1) |
45577 [0.003] (1) |
45586 [0.001] (1) |
45600 [0.004] (0) |
45645 [0.076] (0) |
45652 [0.020] (1) |
45661 [0.237] (1) |
45674 [0.006] (2) |
45733 [0.012] (1) |
46082 [0.217] (2) |
46200 [0.015] (0) |
46265 [0.003] (2) |
46290 [0.001] (0) |
46301 [0.001] (2) |
46306 [0.155] (1) |
46339 [0.011] (1) |
46391 [0.001] (2) |
46397 [0.001] (2) |
46471 [0.006] (1) |
46627 [0.78N/0.114] (1) |
46635 [0.145] (0) |
46645 [0.006] (1) |
46704 [0.002] (0) |
46726 [0.011] (1) |
46838 [0.033] (2) |
Donor |
45182 [0.201] (0) |
45186 [0.94N/0.468] (1) |
45246 [0.578] (1) |
45392 [0.618] (0) |
45402 [0.007] (1) |
45406 [1.00N/0.449] (2) |
45626 [0.90N/0.044] (0) |
45806 [0.005] (0) |
45957 [0.012] (1) |
46009 [0.007] (2) |
46035 [0.097] (1) |
46046 [0.90N/0.063] (0) |
46459 [0.008] (2) |
46705 [0.006] (2) |
46727 [0.005] (0) |
46851 [0.013] (1) |
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