BLASTX alignment cluster 3    (12272..13678)

Local alignments in this cluster

gi|2982259[fasta] (AF051212) probable 60s ribosomal protein L13a [Picea mariana]
Length 206 aa
position (link: detail on the area) subject position direction score
13678..13400 (1..93) - 256
12842..12726 (92..130) - 177
12636..12547 (129..158) - 140
12412..12272 (160..206) - 134

gi|3914535|sp|O49885|R13A_LUPLU[fasta] 60S RIBOSOMAL PROTEIN L13A
gi|2791948|emb|CAA11283| (AJ223363) ribosomal protein L13a [Lupinus luteus]
Length 205 aa
position (link: detail on the area) subject position direction score
13678..13448 (1..77) - 59
13441..13400 (79..92) - 69
12842..12726 (91..129) - 172
12636..12544 (128..158) - 149
12415..12272 (158..205) - 204

gi|730451|sp|P40429|R13A_HUMAN[fasta] 60S RIBOSOMAL PROTEIN L13A (23 KD HIGHLY BASIC PROTEIN)
gi|345897|pir||S29539 basic protein, 23K - human
gi|23691|emb|CAA40254| (X56932) 23 kD highly basic protein [Homo sapiens]
Length 203 aa
position (link: detail on the area) subject position direction score
13645..13400 (7..88) - 66
12842..12726 (87..125) - 169
12636..12559 (124..149) - 70
12409..12287 (156..196) - 98

gi|346557|pir||A44367[fasta] tumor-specific transplantation antigen P198 homolog p23 - bovine (fragment)
Length 202 aa
position (link: detail on the area) subject position direction score
13645..13400 (6..87) - 98
12842..12726 (86..124) - 170
12636..12559 (123..148) - 70
12409..12287 (155..195) - 95

gi|548747|sp|P35427|R13A_RAT[fasta] 60S RIBOSOMAL PROTEIN L13A
gi|1363320|pir||A53204 ribosomal protein L13a - rat
gi|460776|emb|CAA48343| (X68282) rat ribosomal protein L13a [Rattus norvegicus]
Length 203 aa
position (link: detail on the area) subject position direction score
13645..13400 (7..88) - 65
12842..12726 (87..125) - 164
12636..12559 (124..149) - 70
12409..12287 (156..196) - 93

gi|111208|pir||JL0149[fasta] transplantation antigen P198 - mouse
gi|55050|emb|CAA35908| (X51528) tum- transplantation antigen P198 [Mus musculus]
Length 203 aa
position (link: detail on the area) subject position direction score
12842..12726 (87..125) - 164
12636..12559 (124..149) - 70
13645..12287 (7..196) - 89
13645..12287 (7..196) - 89

gi|136478|sp|P19253|R13A_MOUSE[fasta] 60S RIBOSOMAL PROTEIN L13A (TRANSPLANTATION ANTIGEN P198) (TUM-P198 ANTIGEN)
Length 203 aa
position (link: detail on the area) subject position direction score
13645..13400 (7..88) - 84
12842..12726 (87..125) - 164
12636..12559 (124..149) - 70
12409..12287 (156..196) - 89

gi|604496[fasta] (U18488) transplantation antigen [Salmo trutta]
Length 189 aa
position (link: detail on the area) subject position direction score
13621..13400 (1..74) - 59
12842..12726 (73..111) - 169
12636..12559 (110..135) - 74
12409..12287 (142..182) - 78

gi|2500261|sp|P93099|R13A_CYAPA[fasta] 60S RIBOSOMAL PROTEIN L13A
gi|1743007|emb|CAA71090| (Y09971) ribosomal protein L13a [Cyanophora paradoxa]
Length 200 aa
position (link: detail on the area) subject position direction score
13651..13400 (4..87) - 88
12842..12726 (86..124) - 173
12636..12547 (123..152) - 109
12409..12332 (155..180) - 66

gi|2500260|sp|Q27389|R13A_CAEEL[fasta] PROBABLE 60S RIBOSOMAL PROTEIN L13A
gi|963095 (U31528) 60S ribosomal protein L13A [Caenorhabditis elegans]
gi|3878569|emb|CAA86515| (Z46381) similar to L13P family ribosomal protein; cDNA EST EMBL:M79788 comes from this gene; cDNA EST EMBL:D71976 comes from this gene; cDNA EST EMBL:D72020 comes from this gene; cDNA EST EMBL:D72496 comes from this gene; cDNA...
Length 202 aa
position (link: detail on the area) subject position direction score
13663..13400 (2..89) - 277
12842..12732 (88..124) - 99
12624..12547 (128..153) - 81
12412..12272 (155..201) - 73

gi|2879799|emb|CAA16985|[fasta] (AL021813) 60s ribosomal protein [Schizosaccharomyces pombe]
Length 197 aa
position (link: detail on the area) subject position direction score
12842..12726 (88..126) - 136
13651..12547 (6..154) - 108
13651..12547 (6..154) - 108

gi|3299816|dbj|BAA31555|[fasta] (AB016008) ribosomal protein rp22 homolog [Schizosaccharomyces pombe]
Length 193 aa
position (link: detail on the area) subject position direction score
13651..13400 (2..85) - 85
12842..12726 (84..122) - 136
12636..12547 (121..150) - 108

gi|2879875|emb|CAA17016|[fasta] (AL021816) ribosomal protein L13 [Schizosaccharomyces pombe]
Length 197 aa
position (link: detail on the area) subject position direction score
12842..12726 (88..126) - 136
13651..12547 (6..154) - 108
13651..12547 (6..154) - 108

gi|730452|sp|P26784|R13A_YEAST[fasta] 60S RIBOSOMAL PROTEIN L13A (RP22)
gi|626321|pir||S48401 ribosomal protein L16.e.A, cytosolic - yeast (Saccharomyces cerevisiae)
gi|557790|emb|CAA86145| (Z38059) orf, len: 199, CAI: 0.62, predicted to be spliced, similar to A44367 A44367 P23=TUMOR-SPECIFIC TRANSPLANTATION ANTIGEN and ribosomal proteins [Saccharomyces cerevisiae]
Length 199 aa
position (link: detail on the area) subject position direction score
13645..13400 (7..88) - 181
12842..12726 (87..125) - 155
12636..12547 (124..153) - 91

gi|2956772|emb|CAA17885|[fasta] (AL022103) 60s ribosomal protein [Schizosaccharomyces pombe]
Length 197 aa
position (link: detail on the area) subject position direction score
13651..13400 (6..89) - 298
12842..12726 (88..126) - 132
12636..12547 (125..154) - 98

gi|1710642|sp|P26785|RP23_YEAST[fasta] 60S RIBOSOMAL PROTEIN RP23
gi|1077206|pir||S53911 ribosomal protein L16.e.B, cytosolic - yeast (Saccharomyces cerevisiae)
gi|791117|emb|CAA60191| (X86470) unknown [Saccharomyces cerevisiae]
gi|1301951|emb|CAA95943| (Z71345) ORF YNL069c [Saccharomyces cerevisiae]
Length 198 aa
position (link: detail on the area) subject position direction score
13645..13400 (6..87) - 62
12842..12726 (86..124) - 154
12636..12547 (123..152) - 91
12412..12314 (154..186) - 54

gi|2500259|sp|Q95307|R13A_PIG[fasta] 60S RIBOSOMAL PROTEIN L13A
Length 137 aa
position (link: detail on the area) subject position direction score
13645..13400 (3..84) - 287
12842..12726 (83..121) - 169

[help]


Entrance