information on F17I23    (46176..46864)

Direction: +

Frame: 3

ORF

    46026..46948  (Met: 46257 46317 46329 46416 46550 46895 46452 46457 46465 46494)
TVRRFELVAYITLIQEDVEFLVLLLADKQEEGLQGLGNLRSFTFRELHVYTDGFSSKNIL
GAGGFGNVYRGKLGDGTMVAVKRLKDINGTSGDSQFRMELEMISLAVHKNLLRLIGYCAT
SGERLLVYPYMPNGSVASKLKC**S*HQSKSHFR*FNQFCLTVVAKPALDWNMRKRIAIG
AARGLLYLHEQCDPKIIHRDVKAANILLDECFEAVVGDFGLAKLLNHADSHVTTAVRGTV
GHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALEFGKTVSQKGAMLEWVRNDTQKYT
FLITS

GenBank annotation

    None

BLASTX cluster

    44743..47394    cluster 6    103 hits for protein gene

BLASTN cluster

    None

GENSCAN

    44574..55997    gene model 10

    Suboptimal exon

        46102..46389    Intr    Phase: 1    Score: 0.249
        46105..46389    Intr    Phase: 1    Score: 0.133
        46105..46449    Intr    Phase: 1    Score: 0.182

Grail

    46071..46430    exon    Phase: 0    Score: 89

Exon-Intron boundary candidatates

Acceptor
46071 [0.098] (0) 46090 [0.207] (1) 46102 [0.241] (1) 46105 [0.96N/0.998] (1)
46114 [0.001] (1) 46120 [0.001] (1) 46180 [0.69N/0.278] (1) 46190 [0.075] (2)
46197 [0.001] (0) 46235 [0.133] (2) 46397 [0.001] (2) 46527 [1.00N/0.854] (0)
46640 [0.001] (2) 46659 [0.001] (0) 46674 [0.002] (0)
Donor
46028 [0.96N/0.157] (0) 46314 [0.006] (1) 46363 [0.007] (2) 46449 [0.96N/0.047] (1)
46583 [0.825] (0) 46738 [0.004] (2) 46745 [0.097] (0) 46750 [0.014] (2)
46784 [0.550] (0) 46868 [0.013] (0) 46906 [1.00N/0.477] (2) 46926 [0.90N/0.008] (1)

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