information on F17I23
(46131..46861)
Direction: +
Frame: 3
ORF
46026..46948 (Met: 46257 46317 46329 46416 46550 46895 46452 46457 46465 46494)
TVRRFELVAYITLIQEDVEFLVLLLADKQEEGLQGLGNLRSFTFRELHVYTDGFSSKNIL
GAGGFGNVYRGKLGDGTMVAVKRLKDINGTSGDSQFRMELEMISLAVHKNLLRLIGYCAT
SGERLLVYPYMPNGSVASKLKC**S*HQSKSHFR*FNQFCLTVVAKPALDWNMRKRIAIG
AARGLLYLHEQCDPKIIHRDVKAANILLDECFEAVVGDFGLAKLLNHADSHVTTAVRGTV
GHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALEFGKTVSQKGAMLEWVRNDTQKYT
FLITS
GenBank annotation
None
BLASTX cluster
44743..47394 cluster 6 103 hits for protein gene
BLASTN cluster
None
GENSCAN
44574..55997 gene model 10
Suboptimal exon
46102..46389 Intr Phase: 1 Score: 0.249
46105..46389 Intr Phase: 1 Score: 0.133
46105..46449 Intr Phase: 1 Score: 0.182
Grail
46071..46430 exon Phase: 0 Score: 89
Exon-Intron boundary candidatates
Acceptor |
46071 [0.098] (0) |
46090 [0.207] (1) |
46102 [0.241] (1) |
46105 [0.96N/0.998] (1) |
46114 [0.001] (1) |
46120 [0.001] (1) |
46180 [0.69N/0.278] (1) |
46190 [0.075] (2) |
46197 [0.001] (0) |
46235 [0.133] (2) |
46397 [0.001] (2) |
46527 [1.00N/0.854] (0) |
46640 [0.001] (2) |
46659 [0.001] (0) |
46674 [0.002] (0) |
Donor |
46028 [0.96N/0.157] (0) |
46314 [0.006] (1) |
46363 [0.007] (2) |
46449 [0.96N/0.047] (1) |
46583 [0.825] (0) |
46738 [0.004] (2) |
46745 [0.097] (0) |
46750 [0.014] (2) |
46784 [0.550] (0) |
46868 [0.013] (0) |
46906 [1.00N/0.477] (2) |
46926 [0.90N/0.008] (1) |
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Entrance