information on F17I23
(23579..24171)
Direction: +
Frame: 2
ORF
23459..24366 (Met: 23639 23675 23755 23758 23932 24115 24157 24250 24265 23696)
IRDSCVLSETEAIYTEIVVLIILVDSPIDDSRSSGYIYAELKALILVGGFGTRLRPLTLS
MPKPLVDFGNKPMILHQVG*SSSSFVFAQVFTVSFVLIMMHSQIEALKGAGVTEVVLAIN
HQQPEVHTFIVLNNDTITIEILPCHPPSPCVFGITQVMLNFVKEYEKKLEIKITFSQETE
PLGTAGPLALARDKLVDESGQPFFVLNSDVICEYPLLEMIEFHKTNRAEASIMVTEVVKQ
EHFLHFVKFIFHLLIAFSDINRLMILLSMVWWLQRKVQRELKVLSRNRNILWGTRSTLGY
TS
GenBank annotation
None
BLASTX cluster
23579..24881 cluster 3 13 hits for protein gene
BLASTN cluster
None
GENSCAN
22270..28613 gene model 5
Grail
23577..23693 exon Phase: 1 Score: 89
Exon-Intron boundary candidatates
| Acceptor |
| 23464 [0.007] (2) |
23544 [0.005] (1) |
23551 [0.002] (2) |
23554 [0.001] (2) |
| 23577 [0.93N/0.821] (1) |
23585 [0.017] (0) |
23598 [0.024] (1) |
23604 [0.010] (1) |
| 23617 [0.004] (2) |
23690 [0.013] (0) |
23694 [0.006] (1) |
23738 [0.076] (0) |
| 23770 [1.00N/0.311] (2) |
23777 [0.004] (0) |
23786 [0.088] (0) |
23813 [0.001] (0) |
| 23929 [0.318] (2) |
23993 [0.005] (0) |
24014 [0.038] (0) |
24017 [0.429] (0) |
| 24084 [0.004] (1) |
24227 [0.004] (0) |
24246 [0.94N/0.997] (1) |
24283 [0.88N/0.167] (2) |
| 24289 [0.006] (2) |
| Donor |
| 23689 [1.00N/0.985] (0) |
23693 [0.911] (1) |
23835 [1.00N/0.859] (2) |
23908 [0.004] (0) |
| 23928 [0.024] (2) |
24045 [0.092] (2) |
24159 [0.008] (2) |
24168 [0.90N/0.615] (2) |
| 24288 [0.061] (2) |
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Entrance