information on F16J13
(41480..42736)
Direction: +
Frame: 2
ORF
41378..42784 (Met: 41384 41679 41697 41959 42256 42259 42265 42312 42531 42734 41570 41590 41649 41654 41668 41763 41831 42016 42078 42095 42145 42213 42227 42307 42384 42422 42511 42540 42545 42595 42642)
NIMHFCCLQDESNLYIFLELVTQGSLRKLYQRNQLGDSVVSLYTRQILDGLKYLHDKGFI
HRFD*KSLFL*VHVFPKLLISWVVYFFFI**KEH*VQMYWWTLMEQLNLQILDWLRFFSI
NNRCL*FSSTNLVHRLFPLLDTCGILL*NVPLANSVLELDGSRGYCFKILPAVLICQYND
RQTYHTSKEMLYLKLLLKYVPAYIVIQA*SSKIPGYVSFRSLINLKLV*LFLF*YSSYYN
CEYVISDHR*DADVYHFDCTLGYTCTTVFLN*III*RLFLTRRIMMVMELQLIYGALGVL
C*MLTGQIPYSDLEIVSLQDSQTFFI*VSKFPQLSPTI*VKVNEQSIWHSLNLYFSTSDF
VLHLQLF*FYFIFMGF**IKGHNLCKRAGYSLV*LERVSFRKYLIFYR*ARDFILTCLKV
NPEERPTAAELLNHPFVNMPLPSSGSGSVSSLLRG
GenBank annotation
34974..42787 F16J13.90
BLASTX cluster
40398..42745 cluster 12 65 hits for protein gene
BLASTN cluster
42272..42731 cluster 4 1 hits for EST
GENSCAN
34974..42784 gene model 7
Grail
41405..41549 exon Phase: 0 Score: 45
42581..42758 exon Phase: 0 Score: 88
Exon-Intron boundary candidatates
Acceptor |
41405 [0.93N/0.896] (0) |
41448 [0.001] (1) |
41563 [0.112] (2) |
41593 [0.041] (2) |
41596 [0.59N/0.755] (2) |
41662 [0.011] (2) |
41718 [0.003] (1) |
41756 [0.006] (0) |
41766 [0.002] (1) |
41776 [0.001] (2) |
41834 [0.86N/0.653] (0) |
42013 [0.276] (2) |
42053 [0.004] (0) |
42098 [0.003] (0) |
42105 [0.582] (1) |
42135 [0.013] (1) |
42144 [0.357] (1) |
42151 [0.017] (2) |
42184 [0.009] (2) |
42234 [1.00N/0.539] (1) |
42252 [0.005] (1) |
42277 [0.009] (2) |
42327 [0.002] (1) |
42425 [0.002] (0) |
42545 [0.010] (0) |
42557 [0.520] (0) |
42581 [1.00N/0.601] (0) |
42588 [0.004] (1) |
42645 [0.007] (1) |
42759 [0.002] (1) |
Donor |
41549 [0.044] (1) |
41562 [0.332] (2) |
41734 [1.00N/0.584] (0) |
41785 [0.006] (0) |
41833 [0.010] (0) |
41881 [1.00N/0.846] (0) |
42036 [0.91N/0.105] (2) |
42052 [0.822] (0) |
42074 [0.003] (1) |
42143 [0.025] (1) |
42158 [0.006] (1) |
42233 [0.056] (1) |
42321 [0.039] (2) |
42350 [1.00N/0.810] (1) |
42388 [0.99N/0.170] (0) |
42432 [0.024] (2) |
42481 [0.091] (0) |
42608 [0.411] (1) |
42758 [0.88N/0.033] (1) |
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