information on F16J13
(40761..40946)
Direction: +
Frame: 3
ORF
39711..41184 (Met: 39726 39768 39951 40047 40059 40236 40392 40602 40737 40939 41038 40920 40934)
TLKLLMIIPLFQSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSLLSLSQSISY
LKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSGCSKLGNFPEISPNVKELYMGGTMIQE
IPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLR
FLDLSRTDIKELPSSISYLTALDELLFVDSRRNSPVVTNPNANSTELMPSESSKLEILGT
PADNEVVVGGTVEKTRGIERTPTILVKSREYLIPDDVVAVGGDIKGLRPPVLQLQPAMKL
SHIPRGSTWDFVTHFAPPETVAPPSSSSEAREEEVETEETGAMFIPLGDKETCSFTVNKG
DSSRTISNTSPIYASEGSFITCWQKGQLLGRGSLGSVYEGISA*LTG*MFVELKIRFLSC
KAILRKRVFLYAFGSCQPKCFMVDVYVKCRDGDFFAFKEVSLLDQGSQAHEWIQQVEGVR
YTWSITGIKF
GenBank annotation
34974..42787 F16J13.90
BLASTX cluster
40398..42745 cluster 12 65 hits for protein gene
BLASTN cluster
None
GENSCAN
34974..42784 gene model 7
Suboptimal exon
39897..40918 Intr Phase: 0 Score: 0.263
Grail
39768..40922 exon Phase: 0 Score: 87
Exon-Intron boundary candidatates
| Acceptor |
| 39720 [0.001] (0) |
39747 [0.88N/0.158] (0) |
39850 [0.013] (1) |
39900 [0.002] (0) |
| 39921 [0.359] (0) |
39964 [0.001] (1) |
40002 [0.026] (0) |
40006 [0.051] (1) |
| 40195 [0.68N/0.567] (1) |
40222 [0.002] (1) |
40265 [0.001] (2) |
40268 [0.699] (2) |
| 40273 [0.012] (1) |
40336 [0.69N/0.014] (1) |
40343 [0.079] (2) |
40426 [0.019] (1) |
| 40438 [0.006] (1) |
40450 [0.001] (1) |
40468 [0.001] (1) |
40566 [0.008] (0) |
| 40672 [0.036] (1) |
40696 [0.008] (1) |
40703 [0.006] (2) |
40788 [0.001] (0) |
| 40840 [0.001] (1) |
40863 [0.019] (0) |
40866 [0.002] (0) |
40962 [0.020] (0) |
| 40971 [0.014] (0) |
40979 [0.009] (2) |
41064 [0.034] (0) |
41089 [0.023] (1) |
| 41110 [0.361] (1) |
41119 [0.004] (1) |
| Donor |
| 39849 [0.007] (1) |
40050 [0.007] (1) |
40249 [0.070] (2) |
40407 [0.265] (1) |
| 40425 [0.011] (1) |
40458 [0.012] (1) |
40479 [0.006] (1) |
40580 [0.006] (0) |
| 40778 [0.008] (0) |
40894 [0.95N/0.285] (2) |
40898 [0.015] (0) |
40918 [1.00N/0.953] (2) |
| 40931 [0.029] (0) |
41148 [0.87N/0.371] (1) |
41162 [0.166] (0) |
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