information on F16J13
(32438..32109)
Direction: -
Frame: 1
ORF
32510..31359 (Met: 32441 31961 31937 31913 31904 31901 31838 31829 31634 31511 31427)
AKVNFDLHQKFDLWLYFFSQDVGMLKWVDLSHSINLRQCLGLANAHNLERLNLEGCTSLK
KLPSTINCLEKLIYLNLRDCTSLRSLPKGIKTQSLQTLILSGCSSLKKFPLISENVEVLL
LDGTVIKSLPESIQTFRRLALLNLKNCKKLKHLSSDLYKLKCLQELILSGCSQLEVFPEI
KEDMESLEILLMDDTSITEMPKMMHLSNIKTFSLCGTSSHVSVSMFFMPPTLGCSRLTDL
YLSRCSLYKLPDNIGGLSSLQSLCLSGNNIENLPESFNQLNNLKWFDLKFCKMLKSLPVL
PQNLQYLDAHECESLETLANPLTPLTVGERIHSMFIFSNCYKLNQDAQASLVGHARIKSQ
LMANASAKRYYRVFFYPSPFHHQN
GenBank annotation
34711..30643 F16J13.80
BLASTX cluster
40346..30814 cluster 11 94 hits for protein gene
BLASTN cluster
None
GENSCAN
34711..30646 gene model 6
Grail
31727..31356 exon Phase: 0 Score: 80
32277..31356 exon Phase: 2 Score: 53
32450..31356 exon Phase: 0 Score: 85
Exon-Intron boundary candidatates
Acceptor |
31497 [0.004] (2) |
31615 [0.036] (1) |
31643 [0.002] (0) |
31727 [0.021] (0) |
31773 [0.001] (2) |
31795 [0.076] (1) |
31854 [0.004] (2) |
31915 [0.005] (1) |
31975 [0.004] (1) |
32002 [0.93N/0.194] (1) |
32033 [0.002] (0) |
32129 [0.001] (0) |
32146 [0.022] (1) |
32208 [0.011] (2) |
32259 [0.001] (2) |
32277 [0.039] (2) |
32297 [0.001] (0) |
32347 [0.002] (1) |
32396 [0.004] (0) |
32450 [0.92N/0.993] (0) |
Donor |
31395 [1.00N/0.040] (0) |
31432 [0.003] (2) |
31436 [0.74N/0.843] (1) |
31533 [0.008] (0) |
31657 [0.012] (2) |
31841 [0.003] (1) |
31986 [0.059] (0) |
32003 [0.006] (1) |
32402 [0.020] (1) |
32505 [0.028] (0) |
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Entrance