information on F12F1
(6123..5752)
Direction: -
Frame: 3
ORF
6207..5338 (Met: 6084 5958 5814 5808 5625 5616 5346)
CHSSLDKAAIRDQEAGVTSNVFNKWTLSTLTDVEEVKQIVRMLPIWATCILFWTVHAQLT
TLSVAQSETLDRSIGSFEIPPASMAVFYVGGLLLTTAVYDRVAIRLCKKLFNYPHGLRPL
QRIGLGLFFGSMAMAVAALVELKRLRTAHAHGPTVKTLPLGFYLLIPQYLIVGIGEALIY
TGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGKAHPWIADDLNKGR
LYNFYWLVAVLVALNFLIFLVFSKWYVYKEKRLAEVGIELDDEPSIPMGH
GenBank annotation
9284..5335 F12F1.1
BLASTX cluster
9284..5338 cluster 1 10 hits for protein gene
BLASTN cluster
None
GENSCAN
9284..4045 gene model 1
Grail
6113..5335 exon Phase: 1 Score: 89
6199..5335 exon Phase: 2 Score: 30
Exon-Intron boundary candidatates
Acceptor |
5400 [0.020] (0) |
5426 [0.018] (1) |
5566 [0.111] (2) |
5579 [0.003] (1) |
5627 [0.003] (1) |
5658 [0.002] (0) |
5663 [0.076] (1) |
5951 [0.002] (1) |
6017 [0.005] (1) |
6113 [0.007] (1) |
6168 [0.024] (0) |
6175 [0.002] (2) |
6182 [0.173] (1) |
6186 [0.142] (0) |
6191 [0.342] (1) |
6199 [1.00N/0.933] (2) |
Donor |
5343 [0.051] (1) |
5355 [0.007] (1) |
5383 [0.005] (0) |
5414 [0.046] (2) |
5461 [0.007] (0) |
5607 [0.010] (1) |
5628 [0.335] (1) |
5726 [0.004] (2) |
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