information on AP22
(25692..25615)
Direction: -
Frame: 1
ORF
25950..24793 (Met: 25905 25677 25587 25494 25470 25458 25428 24924)
YKKFSNLKFQISEIAMASVTLGSWIVVHHHNHHHPSSILTKSRSRSCPITLTKPISFRSK
RTVSSSSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHE
AMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDL
RRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEG
LVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKF
ARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREAR
DQLLGFDSDKVAPLLALANYIAYRQN
GenBank annotation
25905..24790 C7A10.550
BLASTX cluster
25905..24793 cluster 6 17 hits for protein gene
BLASTN cluster
None
GENSCAN
25905..24793 gene model 4
Grail
25905..24790 exon Phase: 0 Score: 99
Exon-Intron boundary candidatates
Acceptor |
24795 [0.003] (0) |
24799 [0.001] (2) |
24840 [0.006] (0) |
24857 [0.002] (1) |
24880 [0.001] (2) |
24977 [0.001] (1) |
25023 [0.904] (0) |
25166 [0.001] (1) |
25241 [0.001] (1) |
25316 [0.014] (1) |
25355 [0.002] (1) |
25484 [0.001] (1) |
25505 [0.002] (1) |
25625 [0.024] (1) |
25631 [0.011] (1) |
25715 [0.001] (1) |
25822 [0.007] (2) |
25886 [0.029] (1) |
25913 [0.485] (1) |
25920 [0.93N/0.228] (0) |
Donor |
24841 [0.74N/0.014] (0) |
24857 [0.96N/0.023] (2) |
24873 [0.004] (1) |
25038 [0.018] (1) |
25064 [0.070] (2) |
25193 [0.74N/0.416] (2) |
25221 [0.025] (1) |
25232 [0.452] (2) |
25431 [0.005] (1) |
25887 [0.018] (1) |
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Entrance