information on AP22
(21903..21427)
Direction: -
Frame: 1
ORF
22023..21427 (Met: 21918 21699 21663 21624 21531)
FRKRYRYGKLCLFKTSSGNFFLLFAFFYHLNSFLSMQFSDKVLCVDQLTKSIEGLLPLSQ
IHNPNDPRRKELNELEAIKTVIDQKAHSLVRRELWAGLGYLIIQTAGFMRLTFWDLTWDV
MEPICFYVSSVYFMAGYTFFLKTSREPSFQGFYQSRFEAKQRKLMQSEDFDVGRYDELKK
LFNPKPSGAVPKILGSLQN
GenBank annotation
22529..21424 C7A10.540
BLASTX cluster
22505..21427 cluster 5 2 hits for protein gene
BLASTN cluster
None
GENSCAN
22529..20253 gene model 3
25905..24793 gene model 4
Suboptimal exon
21900..21757 Intr Phase: 0 Score: 0.268
Grail
21624..21424 exon Phase: 0 Score: 76
21918..21424 exon Phase: 0 Score: 40
Exon-Intron boundary candidatates
Acceptor |
21429 [0.008] (0) |
21502 [0.002] (2) |
21556 [0.488] (2) |
21597 [0.001] (0) |
21704 [0.004] (1) |
21748 [0.003] (2) |
21866 [0.003] (1) |
21882 [0.454] (0) |
21900 [0.86N/0.065] (0) |
22018 [0.027] (2) |
Donor |
21462 [0.86N/0.017] (1) |
21503 [0.263] (2) |
21557 [0.158] (2) |
21573 [0.051] (1) |
21634 [0.88N/0.017] (0) |
21735 [0.013] (1) |
21784 [0.012] (0) |
21972 [1.00N/0.992] (1) |
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Entrance