information on AP22
(189866..190033)
Direction: +
Frame: 2
ORF
189746..190102 (Met: 189893 189974 189989 190009 190026)
YGQRHGAAGRDSHLLSLYICTWICSLQIGNLFYSVNWKCITRFTEFGGPMHHRPVQDLAF
GVARFIQKGGSFVNYYMVCTL*FWLII*PYTL*FGYHRASLKYKIHCLFLRTVSWRN
GenBank annotation
188285..192579 C7A10.1000
BLASTX cluster
188276..192576 cluster 43 25 hits for protein gene
BLASTN cluster
None
GENSCAN
185687..195679 gene model 38
Suboptimal exon
189904..189976 Intr Phase: 2 Score: 0.378
Grail
189871..189976 exon Phase: 2 Score: 90
Exon-Intron boundary candidatates
| Acceptor |
| 189755 [0.038] (0) |
189871 [0.97N/0.651] (2) |
190012 [0.010] (2) |
190064 [0.001] (0) |
| 190084 [0.002] (2) |
190089 [1.00N/0.535] (1) |
| Donor |
| 189770 [0.96N/0.609] (1) |
189803 [0.012] (1) |
189830 [0.009] (1) |
189976 [1.00N/0.402] (0) |
| 190024 [0.389] (0) |
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Entrance