information on AP22
(145180..144891)
Direction: -
Frame: 2
ORF
145298..144879 (Met: 145217 145205 145190 145106 145091 145076 145043 145034 145025 144974 144953)
AEEVYAIQEACNNATTEGGRSPIFTGVMALVMGVVTMIKVTKNVPRKLTESTLYSSPVYC
DDASMNKSAMQSEKMTVPAISGEDFMAIMKRMAELEQKVTVLSAQPTVMPPDKEEMLNAA
ISRSNVLEQELAATKKVHTF
GenBank annotation
147289..144611 C7A10.870
BLASTX cluster
147289..144763 cluster 31 7 hits for protein gene
BLASTN cluster
None
GENSCAN
150821..139971 gene model 29
102142..103868 gene model 21
Suboptimal exon
145217..144891 Init Phase: 0 Score: 0.117
145222..144891 Intr Phase: 1 Score: 0.155
145294..144891 Intr Phase: 1 Score: 0.303
145297..144891 Intr Phase: 1 Score: 0.203
Grail
145294..144876 exon Phase: 1 Score: 90
Exon-Intron boundary candidatates
Acceptor |
145007 [0.042] (0) |
145054 [0.003] (1) |
145180 [0.001] (1) |
145222 [0.009] (1) |
145271 [0.001] (0) |
145273 [0.002] (1) |
145288 [0.007] (1) |
145291 [0.017] (1) |
145294 [0.95N/0.599] (1) |
145297 [0.003] (1) |
Donor |
144891 [1.00N/0.995] (0) |
145087 [0.014] (2) |
145221 [0.006] (0) |
145240 [0.147] (2) |
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