Jatropha Genome Database

Jcr4S03834.10  
Related links:
Predicted Sequence Links:
Genome Sequence: Jcr4S03834
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9N085_POPTR 144 37.0 50.3 (tr|B9N085) AP2/ERF domain-containing transcription factor OS=Populus trichocarpa GN=ERF78 PE=4 SV=1
Arabidopsis_pep AT1G68550.2 94.7 40.8 52.8 | Symbols: | Integrase-type DNA-binding superfamily protein | chr1:25725810-25726784 REVERSE LENGTH=324
soybean_pep Glyma07g10120.1 104 47.2 66.0  
Medicago_pep IMGA|Medtr5g057810.1 95.5 39.2 52.4 Ethylene-responsive transcription factor 4 (AHRD V1 *-*- B6THY5_MAIZE); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding chr05_pseudomolecule_IMGAG_V3.5 23203443-23202544 H EGN_Mt100125 20100825
grape_pep GSVIVT01011902001 102 43.2 53.2  
castor_bean_cds --No_Hits--        
castor_bean_pep 27524.m000298 81.6 34.3 45.7 DNA binding protein, putative
JAT_unigene contig14608 531 99.0 99.0 length=819 numreads=8 gene=isogroup09517 status=isotig
A list of protein families, domains and functional sites (searches in InterPro)
Jcr4S03834.10 length: 262 aa.
IPR001471 Pathogenesis-related transcriptional factor/ERF, DNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 1.2e-09 107-118
129-145
Gene3D G3DSA:3.30.730.10 no description 8.7e-19 107-152
HMMPfam PF00847 AP2 1.9e-14 105-154
HMMSmart SM00380 no description 1.6e-17 106-160
ProfileScan PS51032 AP2_ERF 18.281 106-165
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 1.8e-17 105-153
no_ID  
Seg seg seg NA 38-46
169-182