Jatropha Genome Database
- Jcr4S03834.10
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jcr4S03834.10
(789 letters)
Database: JAT_unigene
122,497 sequences; 49,272,789 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
contig14608 length=819 numreads=8 gene=isogroup09517 status=... 531 e-150
contig18988 length=446 numreads=7 gene=isogroup13897 status=... 502 e-141
EST_FM895993 68 1e-10
>contig14608 length=819 numreads=8 gene=isogroup09517
status=isotig
Length = 819
Score = 531 bits (268), Expect = e-150
Identities = 285/288 (98%), Gaps = 2/288 (0%)
Strand = Plus / Minus
Query: 1 atgccaggactcaaaaacccaatgttggatcaaaatttaagtaaaatcaaacaaaacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 atgccaggactcaaaaacccaatgttggatcaaaatttaagtaaaatcaaacaaaacaat 229
Query: 61 ttcatttcaacaagaaaagttcgcattatatatcatgaccctgaagccacagattcatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ttcatttcaacaagaaaagttcgcattatatatcatgaccctgaagccacagattcatca 169
Query: 121 agtgatgaagatgaagaactcattaatggaagcagcaagcgattatttggcaatggtaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 agtgatgaagatgaagaactcattaatggaagcagcaagcgattatttggcaatggtaag 109
Query: 181 cgttttgtaagagagattactctttcaactatgcaatatgaaacaagaattgagaattct 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 108 cgttttgtaagagagattactctttcaactatgcaatatgaaacaaggattgagaattct 49
Query: 241 tgc-aaaaccaaaacc-aaaagtaatgtttatactagcaccaagttgg 286
||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 48 tgcaaaaaccaaaaccaaaaagtaatgtttatactagcaccaagttgg 1
>contig18988 length=446 numreads=7 gene=isogroup13897
status=isotig
Length = 446
Score = 502 bits (253), Expect = e-141
Identities = 253/253 (100%)
Strand = Plus / Plus
Query: 537 ttcggttcttgataatggagttgaaagttcgattaaacaggaaactaatatggagtataa 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcggttcttgataatggagttgaaagttcgattaaacaggaaactaatatggagtataa 60
Query: 597 cgactatggtgactgttactcacaatttagtaatgattttggtcaattctttggtggtgt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgactatggtgactgttactcacaatttagtaatgattttggtcaattctttggtggtgt 120
Query: 657 caatgataccgagtatttttctgtgcccgactgcgaagggttggtggattttccattgtc 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatgataccgagtatttttctgtgcccgactgcgaagggttggtggattttccattgtc 180
Query: 717 tgggatgattgatcttcccaacattgaacttgagaatcttgatttgctggagaaagctct 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgggatgattgatcttcccaacattgaacttgagaatcttgatttgctggagaaagctct 240
Query: 777 caattttacataa 789
|||||||||||||
Sbjct: 241 caattttacataa 253
>EST_FM895993
Length = 481
Score = 67.9 bits (34), Expect = 1e-10
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 70 acaagaaaagttcgcattatatatcatgaccctgaagccacagattcatcaagtgatgaa 129
||||||||||||||||| || | ||||| ||||| |||||||| || ||||| ||||||
Sbjct: 335 acaagaaaagttcgcataatttgccatgatcctgatgccacagactcttcaagcgatgaa 276
Query: 130 gatgaagaactcattaat 147
||||||| || |||||||
Sbjct: 275 gatgaagcacacattaat 258