Gene/Protein Characteristic Table for KIAA0044
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Product ID ORK01954
Accession No D26445
Description protein phosphatase 2, regulatory subunit B', gamma
Clone name ha00492
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (3702 bp)
Predicted protein sequence (484 aa)
Flexi ORF Clone FXC01954
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0044 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 3702 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 2247 bp
Genome contig ID gi51511730f_101246036
PolyA signal sequence
(AATAAA,-27)
+----*----+----*----+----*----+----
ACATTGGAAATAAACCGGTGACTGTTTTTCTTCAT
Flanking genome sequence
(217575 - 217624)
----+----*----+----*----+----*----+----*----+----*
AAAGTTCTGCGTTTGGCATCTTCACTCTTTCCAAAATGTATCTGTACATC

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 14 f 101346036 101463609 13 99.4 Perfect prediction
Features of the protein sequence
Description

Length: 484 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
EAW81755 2.2e-202 100.0 protein phospha...
Homo sapiens
XP_001489084 1.4e-199 98.8 protein phospha...
Equus caballus
XP_537555 8.3e-199 98.6 similar to gamm...
Canis lupus fam...
BAG72712 2e-198 100.0 protein phospha...
synthetic construct
AAL14778 9e-198 99.8 PP2A B56 gamma ...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR002554 25 437 PF01603 Protein phosphatase 2A
Expression profile
Description

Northern blot
Experimental conditions
Primer_f
Primer_r
PCR conditions test

RH mapping information
Description

Chromosome No. 14
Experimental conditions
Panel name Stanford G3
Primer_f ACCCCGTTCCGTAGGCAATAA
Primer_r GTGCTTTCCTATCGCTCTGAC
PCR product length 183 bp
PCR conditions 95 °C15 sec63 °C60 sec30 cycles
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