Gene/Protein Characteristic Table for KIAA1229
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Product ID ORK00774
Accession No AB033055
Description outer dense fiber of sperm tails 2-like, transcript variant 2
Clone name fh05775
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5654 bp)
Predicted protein sequence (696 aa)
Flexi ORF Clone FXC00774
Source Human fetal brain
Rouge ID mKIAA1229 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5654 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 3461 bp
Genome contig ID gi89161185r_86487000
PolyA signal sequence
(AATAAA,-26)
+----*----+----*----+----*----+----
CAATGTTTGAATAAATTGTCAAATTTATTTTCTCT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAGTAGTAGATTTTTATTATGAGTCTAAAATGTGATTGGGTAAAAAAATA

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 1 r 86587000 86634533 18 99.3 Perfect prediction
Features of the protein sequence
Description

Length: 696 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAG10004 6.9e-200 100.0 outer dense fib...
synthetic construct
Q9ULJ1 1.8e-199 99.8 Outer dense fib...
Homo sapiens
EAW73188 2e-197 99.8 outer dense fib...
Homo sapiens
EAW73191 1.6e-150 96.9 outer dense fib...
Homo sapiens
AAH91490 8.9e-141 91.4 ODF2L protein [...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f TCATCCTGTGGCTTTGTACTG
Primer_r AATGACACCTGATACCTTCTG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 1
Experimental conditions
Panel name GeneBridge 4
Primer_f TCATCCTGTGGCTTTGTACTG
Primer_r AATGACACCTGATACCTTCTG
PCR product length 102 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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