Gene/Protein Characteristic Table for FLJ00020
Order Kazusa clone(s) from : Japan || Other countries
Product ID ORK05037
Accession No AK024431
Clone name as00020
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4319 bp)
Predicted protein sequence (1142 aa)
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 4319 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 1142 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAB15721 0 100.0 FLJ00020 protei...
Homo sapiens
AAH55285 0 99.9 AT-hook transcr...
Homo sapiens
AAU34186 0 99.8 AKNA transcript...
Homo sapiens
AAU34191 0 99.8 AKNA transcript...
Homo sapiens
AAU34187 0 99.8 AKNA transcript...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AK131082 1.8e-168 99.6 FLJ00281
AK074040 1.3e-147 95.0 FLJ00093
AB075848 6.2e-84 99.8 KIAA1968
AK160382 1.1e-81 99.4 FLJ00356
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
ProfileScan IPR000694 963 1083 PS50099 Proline-rich region
Experimental conditions
Primer_f
Primer_r
PCR conditions test
Order Kazusa clone(s) from : Japan || Other countries
Back to the NEDO Protein Database homepage
Send a message to office AT kazusa.or.jp