Gene/Protein Characteristic Table for KIAA1846
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Product ID ORK04033
Accession No AB058749
Description acyl-CoA synthetase short-chain family member 1
Clone name fg06344s1
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (2597 bp)
Predicted protein sequence (354 aa)
Source Human fetal brain
Rouge ID mKIAA1846 by Kazusa Mouse cDNA Project
Note We replaced fg06344, former representative clones for KIAA1846 with fg06344s1. (2002/5/10)
Features of the cloned cDNA sequence

Length: 2597 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 1530 bp
Genome contig ID gi51511747r_24834868
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 20 r 24934868 24950129 9 99.3 Perfect prediction
Features of the protein sequence

Length: 354 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAC03853 2e-150 100.0 unnamed protein...
Homo sapiens
XP_001149649 2.3e-150 100.0 acyl-CoA synthe...
Pan troglodytes
XP_001149714 2.4e-150 100.0 acyl-CoA synthe...
Pan troglodytes
BAC86035 2.6e-150 100.0 unnamed protein...
Homo sapiens
XP_001149851 2.8e-150 100.0 acyl-CoA synthe...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR000873 1 245 PF00501 AMP-dependent synthetase and ligase
Expression profile

Experimental conditions
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information

Chromosome No. 20
Experimental conditions
Panel name unigene
Primer_f -
Primer_r -
PCR product length -
PCR conditions -
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