Gene/Protein Characteristic Table for KIAA1553
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Product ID ORK05675
Accession No AB046773
Description BEN domain containing 3
Clone name fh17011
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5538 bp)
Predicted protein sequence (670 aa)
Source Human fetal brain
Rouge ID mKIAA1553 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5538 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 3524 bp
Genome contig ID gi89161210r_107393078
PolyA signal sequence
(TATAAA,-17)
+----*----+----*----+----*----+----
ATGAGTTATATAAAATGTTATAAAAATAGAAAAAC
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
ATGGTCTCGTAACATGTTATTTTCTTAGAGCACTGGTCTCTCAGAATATG

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 6 r 107493078 107498614 1 99.0 Perfect prediction
Features of the protein sequence
Description

Length: 670 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
EAW48401 0 99.9 hCG1646472 [Hom...
Homo sapiens
XP_527466 0 99.7 similar to RP11...
Pan troglodytes
XP_001091339 0 99.4 hypothetical pr...
Macaca mulatta
XP_001504004 0 97.5 hypothetical pr...
Equus caballus
XP_603724 0 96.7 hypothetical pr...
Bos taurus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f AGGCGAGAACACTGGATGATG
Primer_r ACAAGAAGCCAAAAGCCCCTG
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 6
Experimental conditions
Panel name CCR
Primer_f AGGCGAGAACACTGGATGATG
Primer_r ACAAGAAGCCAAAAGCCCCTG
PCR product length 178 bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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