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Gene/Protein Characteristic Table for KIAA0849

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Product ID	ORK01610
Accession No	AB020656
Description	cylindromatosis (turban tumor syndrome), transcript variant 2
Clone name	fh04363
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328, AmpR). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACG CGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector. This cDNA clone fh04363 has an irregular adapter sequence (GTCGACCCAC GCGTCCGCGG ACGCGTGGG) instead of regular one (GTCGACCCAC GCGTCCG).
cDNA sequence	DNA sequence (5414 bp) Predicted protein sequence (960 aa)
HaloTag ORF Clone	FHC01610
Flexi ORF Clone	FXC01610
Source	Human fetal brain
Rouge ID	mKIAA0849 by Kazusa Mouse cDNA Project
Note	We replaced hk05904, former representative clones for KIAA0849 with fh04363. (2001/5/29)

Length: 5414 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 960 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against HUGE database (FASTA output, Multiple alignment)

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR000938	134	210	PF01302	CAP-Gly
	IPR000938	239	310	PF01302	CAP-Gly
	IPR000938	476	544	PF01302	CAP-Gly
ProfileScan	IPR000938	160	205	PS50245	CAP-Gly
	IPR000938	496	539	PS50245	CAP-Gly
	IPR001394	596	955	PS50235	Peptidase C19
ScanRegExp	IPR000938	260	293	PS00845	CAP-Gly
	IPR001394	597	612	PS00972	Peptidase C19

RT-PCR-ELISA

Experimental conditions

Chromosome No. 16
Experimental conditions

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