Gene/Protein Characteristic Table for KIAA0419
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Product ID ORK01085
Accession No AB007879
Description centriolar coiled coil protein 110kDa, transcript variant 2
Clone name hh01019
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (5399 bp)
Predicted protein sequence (1000 aa)
Flexi ORF Clone FXC01085
Source Human adult brain
Rouge ID mKIAA0419 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5399 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 2132 bp
Genome contig ID gi51511732f_19342779
PolyA signal sequence
(AATAAA,-21)
+----*----+----*----+----*----+----
TAGGCAAAAAGCAAAATAAACTTTTCATCTTAAAG
Flanking genome sequence
(129450 - 129499)
----+----*----+----*----+----*----+----*----+----*
AAAATCTAGTTTGATTGTTTTTATTTACCAGGGGAAGGACTATTAAGAAA

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 16 f 19442779 19472227 15 99.3 Perfect prediction
Features of the protein sequence
Description

Length: 1000 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAG11187 0 100.0 centrosomal pro...
synthetic construct
AAH36654 0 99.8 CP110 protein [...
Homo sapiens
CAH18111 0 98.2 hypothetical pr...
Homo sapiens
O43303 0 98.1 Centrosomal pro...
Homo sapiens
BAG62153 0 98.1 unnamed protein...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Expression profile
Description

RT-PCR
Experimental conditions
Primer_f CAGTACCATTTGAGCCATTCG
Primer_r AGAACAGTATCAGCACACAGC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 16
Experimental conditions
Panel name GeneBridge 4
Primer_f CAGTACCATTTGAGCCATTCG
Primer_r AGAACAGTATCAGCACACAGC
PCR product length 104 (1.6k) bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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