Gene/Protein Characteristic Table for KIAA0240
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Product ID ORK01661
Accession No D87077
Description GLTSCR1-like
Clone name fg03390
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (6512 bp)
Predicted protein sequence (1087 aa)
Flexi ORF Clone FXC01661
Source Human fetal brain
Rouge ID mKIAA0240 by Kazusa Mouse cDNA Project
Note We replaced ha04715, former representative clones for KIAA0240 with fg03390. (2005/08/06)
Features of the cloned cDNA sequence
Description

Length: 6512 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 2945 bp
Genome contig ID gi89161210f_42722674
PolyA signal sequence
(TATAAA,-15)
+----*----+----*----+----*----+----
ATACATTTTGTAAAAATATTTATAAAATGTTTTGT
Flanking genome sequence
(221434 - 221483)
----+----*----+----*----+----*----+----*----+----*
AAAAAAAAAAAAACTATAACAAATTGCAGTTTATTTTGTTATGTTGGATA

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 6 f 42822674 42944106 15 99.4 Perfect prediction
Features of the protein sequence
Description

Length: 1087 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
CAH10475 0 99.8 hypothetical pr...
Homo sapiens
XP_527387 0 99.6 hypothetical pr...
Pan troglodytes
XP_532139 0 94.6 hypothetical pr...
Canis lupus fam...
XP_001362358 0 83.6 hypothetical pr...
Monodelphis dom...
XP_001509096 0 78.0 hypothetical pr...
Ornithorhynchus...
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Expression profile
Description

Northern blot
Experimental conditions
Primer_f
Primer_r
PCR conditions test

RH mapping information
Description

Chromosome No. 6
Experimental conditions
Panel name Genebridge 4
Primer_f TGTGTCCTTAAGTACTTCCTG
Primer_r TAAAGCCCACACCACACTGAC
PCR product length 172 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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