Gene/Protein Characteristic Table for KIAA0220
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Product ID ORK05585
Accession No D86974
Description Homo sapiens mRNA for KIAA0220 gene, partial cds.
Clone name ha04626
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (5471 bp)
Predicted protein sequence (553 aa)
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0220 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 5471 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning Warning
Integrity of 3' end
Length of 3'UTR 128 bp
Genome contig ID gi51511732r_21220978
PolyA signal sequence
(AATAAA,-18)
+----*----+----*----+----*----+----
AAAACTAACAAAGAATAAATAAATAATATAAAAAT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAAATAAATACTGCAGTCCTTATGTTATTGCTTTGTTTCGATATCTGGTA

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 16 r 21320978 21377463 24 99.3 Terminal No-hit
Ensembl gnome browser 16 f 22399084 22455335 25 99.1 Terminal No-hit
Ensembl gnome browser 16 r 21753412 21809706 26 98.8 Terminal No-hit
Ensembl gnome browser 16 r 29402383 29459387 25 98.3 Both No-hit
Ensembl gnome browser 16 r 29300140 29357622 27 97.2 Both No-hit
Features of the protein sequence
Description

Length: 553 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAG61851 0 100.0 unnamed protein...
Homo sapiens
Q5BKU6 0 100.0 Putative unchar...
Homo sapiens
AAH90929 0 100.0 LOC641298 prote...
Homo sapiens
XP_001151793 0 96.0 similar to PI-3...
Pan troglodytes
XP_001151857 0 96.0 similar to PI-3...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Expression profile
Description

Northern blot
Experimental conditions
Primer_f
Primer_r
PCR conditions test

RH mapping information
Description

Chromosome No. 16
Experimental conditions
Panel name Genebridge 4
Primer_f CGGAGGTTGAGCTGAGAAGAG
Primer_r TGTTAGTTTTTGGAGTGTGGG
PCR product length 118 bp
PCR conditions 95 °C15 sec66 °C60 sec30 cycles
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