Gene/Protein Characteristic Table for KIAA0192
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Product ID ORK01589
Accession No D83783
Description mediator complex subunit 12
Clone name ha02370
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (6604 bp)
Predicted protein sequence (2124 aa)
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0192 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 6604 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 229 bp
Genome contig ID gi89161218f_70156008
PolyA signal sequence
(AATACA,-20)
+----*----+----*----+----*----+----
AGAGCTGTTGCACCCAATACACAGAGCTTCTTTGC
Flanking genome sequence
(123016 - 123065)
----+----*----+----*----+----*----+----*----+----*
AAAGGGAGTGTGCGAGTTCTGCATGTCTGGGAAGGGTGGTCTCTTGGGAG
Features of the protein sequence
Description

Length: 2124 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAD22033 0 100.0 thyroid hormone...
Homo sapiens
Q93074 0 100.0 Mediator of RNA...
Homo sapiens
EAX05315 0 99.9 mediator of RNA...
Homo sapiens
Q5RCU2 0 99.8 Mediator of RNA...
Pongo pygmaeus
XP_001088424 0 99.7 mediator of RNA...
Macaca mulatta
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB046855 2e-49 58.4 KIAA1635
AB058722 6.6e-10 32.7 KIAA1819
AB058721 2.8e-05 27.4 KIAA1818
AB028971 0.00079 29.1 KIAA1048
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
None - - - - -

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 221 KLLLPLLLRYSGEFVQSAYLSR 242 SECONDARY 22
2 307 FGLSCILQTILLCCPSALVWHYS 329 PRIMARY 23
Expression profile
Description

Northern blot
Experimental conditions
Primer_f
Primer_r
PCR conditions test

RH mapping information
Description

Chromosome No. X
Experimental conditions
Panel name Genebridge 4
Primer_f CGTTGTAATACCCTTCCTGAC
Primer_r TTTTGGCTAGTTGCGTGAGTG
PCR product length 151 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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