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Gene/Protein Characteristic Table for FLJ00187

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Product ID	ORK01039
Accession No	AK074116
Clone name	sj02149
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4411 bp) Predicted protein sequence (563 aa)
HaloTag ORF Clone	FHC01039
Flexi ORF Clone	FXC01039
Source	Human spleen
Rouge ID	mFLJ00187 by Kazusa Mouse cDNA Project

Length: 4411 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 563 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR007087	377	400	PD000003	Zn-finger
	IPR007087	405	428	PD000003	Zn-finger
	IPR007087	433	456	PD000003	Zn-finger
	IPR007087	461	484	PD000003	Zn-finger
	IPR007087	489	512	PD000003	Zn-finger
	IPR007087	517	539	PD000003	Zn-finger
FPrintScan	IPR007086	460	473	PR00048	Zn-finger
	IPR007086	476	485	PR00048	Zn-finger
HMMPfam	IPR003309	50	143	PF02023	Transcriptional regulator SCAN
	IPR001909	227	267	PF01352	KRAB box
	IPR007087	377	399	PF00096	Zn-finger
	IPR007087	405	427	PF00096	Zn-finger
	IPR007087	433	455	PF00096	Zn-finger
	IPR007087	461	483	PF00096	Zn-finger
	IPR007087	489	511	PF00096	Zn-finger
	IPR007087	517	539	PF00096	Zn-finger
HMMSmart	IPR003309	52	162	SM00431	Transcriptional regulator SCAN
	IPR001909	227	287	SM00349	KRAB box
	IPR007087	377	399	SM00355	Zn-finger
	IPR007087	405	427	SM00355	Zn-finger
	IPR007087	433	455	SM00355	Zn-finger
	IPR007087	461	483	SM00355	Zn-finger
	IPR007087	489	511	SM00355	Zn-finger
	IPR007087	517	539	SM00355	Zn-finger
ProfileScan	IPR003309	56	138	PS50804	Transcriptional regulator SCAN
	IPR001909	227	300	PS50805	KRAB box
	IPR007087	377	404	PS50157	Zn-finger
	IPR007087	405	432	PS50157	Zn-finger
	IPR007087	433	460	PS50157	Zn-finger
	IPR007087	461	488	PS50157	Zn-finger
	IPR007087	489	516	PS50157	Zn-finger
	IPR007087	517	544	PS50157	Zn-finger
ScanRegExp	IPR007087	379	399	PS00028	Zn-finger
	IPR007087	407	427	PS00028	Zn-finger
	IPR007087	435	455	PS00028	Zn-finger
	IPR007087	463	483	PS00028	Zn-finger
	IPR007087	491	511	PS00028	Zn-finger
	IPR007087	519	539	PS00028	Zn-finger

Experimental conditions

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