BP048513 ( SPD057b08_f )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP048513  SPD057b08_f
         (362 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_A5C1N5 Chromosome chr6 scaffold_3, whole genome shotgu...    82   1e-14
UniRef100_B7FHG8 Putative uncharacterized protein n=1 Tax=Medica...    82   2e-14
UniRef100_P46279 DNA-directed RNA polymerase II subunit RPB7 n=2...    82   2e-14
UniRef100_B9S3C9 DNA-directed RNA polymerase II 19 kD polypeptid...    81   4e-14
UniRef100_B9GGV6 Predicted protein n=1 Tax=Populus trichocarpa R...    81   4e-14
UniRef100_Q6ATY6 Os05g0400700 protein n=2 Tax=Oryza sativa RepID...    79   1e-13
UniRef100_B4G147 DNA-directed RNA polymerase II 19 kDa polypepti...    78   3e-13
UniRef100_P38421 DNA-directed RNA polymerase II subunit RPB7 n=2...    76   1e-12
UniRef100_A9TN64 Predicted protein n=1 Tax=Physcomitrella patens...    76   1e-12
UniRef100_B8P5T6 Predicted protein n=1 Tax=Postia placenta Mad-6...    58   3e-07
UniRef100_B0DKE6 Predicted protein n=1 Tax=Laccaria bicolor S238...    58   4e-07
UniRef100_A8N5F1 Putative uncharacterized protein n=1 Tax=Coprin...    58   4e-07
UniRef100_UPI0000584A92 PREDICTED: similar to Polymerase (RNA) I...    57   5e-07
UniRef100_UPI0001923EB2 PREDICTED: similar to DNA directed RNA p...    57   6e-07
UniRef100_Q54P04 DNA-directed RNA polymerase II subunit rpb7 n=1...    57   6e-07
UniRef100_Q00ZY7 DNA-directed RNA polymerase subunit E' (ISS) n=...    55   2e-06
UniRef100_A4S3R6 Predicted protein n=1 Tax=Ostreococcus lucimari...    55   2e-06
UniRef100_UPI00018ACFE3 RNA polymerase II subunit 7 n=1 Tax=Naso...    55   2e-06
UniRef100_UPI000051A7BC PREDICTED: similar to Rpb7 CG31155-PA, p...    55   2e-06
UniRef100_UPI00006A4A38 PREDICTED: similar to DNA directed RNA p...    55   3e-06
UniRef100_UPI000186CD1A mixed-lineage leukemia protein, mll, put...    54   7e-06
UniRef100_B6JXX4 DNA-directed RNA polymerase II subunit RPB7 n=1...    54   7e-06
UniRef100_O14459 DNA-directed RNA polymerase II subunit rpb7 n=1...    54   7e-06
UniRef100_C3ZQZ0 Putative uncharacterized protein n=1 Tax=Branch...    53   9e-06
UniRef100_C1BND7 DNA-directed RNA polymerase II subunit RPB7 n=1...    53   9e-06
graphical overview:
alignment
UniRef100_A5C1N5 UniRef100_A5C1N5 UniRef100_B7FHG8 UniRef100_B7FHG8 UniRef100_P46279 UniRef100_P46279 UniRef100_B9S3C9 UniRef100_B9S3C9 UniRef100_B9GGV6 UniRef100_B9GGV6 UniRef100_Q6ATY6 UniRef100_Q6ATY6 UniRef100_B4G147 UniRef100_B4G147 UniRef100_P38421 UniRef100_P38421 UniRef100_A9TN64 UniRef100_A9TN64 UniRef100_B8P5T6 UniRef100_B8P5T6 UniRef100_B0DKE6 UniRef100_B0DKE6 UniRef100_A8N5F1 UniRef100_A8N5F1 UniRef100_UPI0000584A92 UniRef100_UPI0000584A92 UniRef100_UPI0001923EB2 UniRef100_UPI0001923EB2 UniRef100_Q54P04 UniRef100_Q54P04 UniRef100_Q00ZY7 UniRef100_Q00ZY7 UniRef100_A4S3R6 UniRef100_A4S3R6 UniRef100_UPI00018ACFE3 UniRef100_UPI00018ACFE3 UniRef100_UPI000051A7BC UniRef100_UPI000051A7BC UniRef100_UPI00006A4A38 UniRef100_UPI00006A4A38 UniRef100_UPI000186CD1A UniRef100_UPI000186CD1A UniRef100_B6JXX4 UniRef100_B6JXX4 UniRef100_O14459 UniRef100_O14459 UniRef100_C3ZQZ0 UniRef100_C3ZQZ0