BP045888 ( SPD024d01_f )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP045888  SPD024d01_f
         (511 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_A7NVD7 Chromosome chr18 scaffold_1, whole genome shotg...   222   1e-56
UniRef100_A4L9I5 Putative photosystem II protein n=1 Tax=Gossypi...   221   2e-56
UniRef100_A4L9G7 Putative photosystem II protein n=1 Tax=Gossypi...   221   2e-56
UniRef100_Q943K1 Os01g0869800 protein n=2 Tax=Oryza sativa RepID...   221   2e-56
UniRef100_B9RJ42 Photosystem II 22 kDa protein, chloroplast, put...   219   6e-56
UniRef100_Q2LAH0 Chloroplast photosystem II 22 kDa component n=1...   218   2e-55
UniRef100_B2ZAP6 Putative photosystem II protein n=1 Tax=Gossypi...   217   3e-55
UniRef100_Q2LAH1 Chloroplast photosystem II 22 kDa component n=1...   217   4e-55
UniRef100_A9PIG1 Putative uncharacterized protein n=1 Tax=Populu...   216   7e-55
UniRef100_Q94EI1 At1g44575/T18F15 n=1 Tax=Arabidopsis thaliana R...   214   2e-54
UniRef100_Q0J8R9 Os04g0690800 protein n=2 Tax=Oryza sativa Japon...   214   2e-54
UniRef100_A9NK12 Putative uncharacterized protein n=1 Tax=Picea ...   214   2e-54
UniRef100_Q259V3 B0518A01.1 protein n=2 Tax=Oryza sativa RepID=Q...   214   2e-54
UniRef100_Q9XF91 Photosystem II 22 kDa protein, chloroplastic n=...   214   2e-54
UniRef100_P54773 Photosystem II 22 kDa protein, chloroplastic n=...   214   3e-54
UniRef100_Q40716 22 kDa protein of photosystem II n=1 Tax=Oryza ...   213   6e-54
UniRef100_Q9FPP4 Photosystem II 22 kDa protein, chloroplastic n=...   213   8e-54
UniRef100_Q9SMB4 Photosystem II 22 kDa protein, chloroplastic n=...   212   1e-53
UniRef100_Q02060 Photosystem II 22 kDa protein, chloroplastic n=...   212   1e-53
UniRef100_C5XR87 Putative uncharacterized protein Sb03g041100 n=...   209   9e-53
UniRef100_Q6WFB1 Photosystem II subunit PsbS n=1 Tax=Zea mays Re...   208   1e-52
UniRef100_B6TKD1 Photosystem II 22 kDa protein n=1 Tax=Zea mays ...   208   1e-52
UniRef100_B3RFS0 Chloroplast chlorophyll a/b-binding protein (Fr...   205   2e-51
UniRef100_C6TK51 Putative uncharacterized protein n=1 Tax=Glycin...   203   5e-51
UniRef100_A9TJ15 Photosystem II 22kDa chloroplast protein n=1 Ta...   200   5e-50
UniRef100_C6TD06 Putative uncharacterized protein n=1 Tax=Glycin...   199   1e-49
UniRef100_Q1EMP1 Photosystem II, 22 kDa Protein n=1 Tax=Plantago...   198   2e-49
UniRef100_B7FJ53 Putative uncharacterized protein (Fragment) n=1...   197   4e-49
UniRef100_A9NYQ2 Putative uncharacterized protein n=1 Tax=Picea ...   195   1e-48
UniRef100_Q2VL34 PSII subunit PsbS (Fragment) n=1 Tax=Xerophyta ...   188   2e-46
UniRef100_Q56ZF6 Photosystem II chlorophyll-binding protein PsbS...   105   2e-21
UniRef100_A4QPL3 Chloroplast photosystem II 22 kDa PsbS protein ...   100   7e-20
UniRef100_A4QPL4 Chloroplast photosystem II 22 kDa PsbS protein ...   100   1e-19
UniRef100_Q3ECX1 Putative uncharacterized protein At1g44575.2 n=...    88   4e-16
UniRef100_A8HPM5 Chloroplast photosystem II-associated 22 kDa pr...    88   4e-16
UniRef100_A8HPM2 Chloroplast photosystem II-associated 22 kDa pr...    88   4e-16
UniRef100_B8AYN2 Putative uncharacterized protein n=1 Tax=Oryza ...    71   4e-11
UniRef100_B9FMS6 Putative uncharacterized protein n=1 Tax=Oryza ...    69   2e-10
UniRef100_C6SX13 Putative uncharacterized protein n=1 Tax=Glycin...    65   3e-09
UniRef100_Q1KTI0 Chloroplast PSII associated light-harvesting co...    56   1e-06
graphical overview:
alignment
UniRef100_A7NVD7 UniRef100_A7NVD7 UniRef100_A7NVD7 UniRef100_A7NVD7 UniRef100_A4L9I5 UniRef100_A4L9I5 UniRef100_A4L9I5 UniRef100_A4L9I5 UniRef100_A4L9G7 UniRef100_A4L9G7 UniRef100_A4L9G7 UniRef100_A4L9G7 UniRef100_Q943K1 UniRef100_Q943K1 UniRef100_Q943K1 UniRef100_Q943K1 UniRef100_B9RJ42 UniRef100_B9RJ42 UniRef100_B9RJ42 UniRef100_B9RJ42 UniRef100_Q2LAH0 UniRef100_Q2LAH0 UniRef100_Q2LAH0 UniRef100_Q2LAH0 UniRef100_B2ZAP6 UniRef100_B2ZAP6 UniRef100_B2ZAP6 UniRef100_B2ZAP6 UniRef100_Q2LAH1 UniRef100_Q2LAH1 UniRef100_Q2LAH1 UniRef100_Q2LAH1 UniRef100_A9PIG1 UniRef100_A9PIG1 UniRef100_A9PIG1 UniRef100_A9PIG1 UniRef100_Q94EI1 UniRef100_Q94EI1 UniRef100_Q94EI1 UniRef100_Q94EI1 UniRef100_Q0J8R9 UniRef100_Q0J8R9 UniRef100_Q0J8R9 UniRef100_Q0J8R9 UniRef100_A9NK12 UniRef100_A9NK12 UniRef100_A9NK12 UniRef100_A9NK12 UniRef100_Q259V3 UniRef100_Q259V3 UniRef100_Q259V3 UniRef100_Q259V3 UniRef100_Q9XF91 UniRef100_Q9XF91 UniRef100_Q9XF91 UniRef100_Q9XF91 UniRef100_P54773 UniRef100_P54773 UniRef100_P54773 UniRef100_P54773 UniRef100_Q40716 UniRef100_Q40716 UniRef100_Q40716 UniRef100_Q40716 UniRef100_Q9FPP4 UniRef100_Q9FPP4 UniRef100_Q9FPP4 UniRef100_Q9FPP4 UniRef100_Q9SMB4 UniRef100_Q9SMB4 UniRef100_Q9SMB4 UniRef100_Q9SMB4 UniRef100_Q02060 UniRef100_Q02060 UniRef100_Q02060 UniRef100_Q02060 UniRef100_C5XR87 UniRef100_C5XR87 UniRef100_C5XR87 UniRef100_C5XR87 UniRef100_Q6WFB1 UniRef100_Q6WFB1 UniRef100_Q6WFB1 UniRef100_Q6WFB1 UniRef100_B6TKD1 UniRef100_B6TKD1 UniRef100_B6TKD1 UniRef100_B6TKD1 UniRef100_B3RFS0 UniRef100_B3RFS0 UniRef100_B3RFS0 UniRef100_B3RFS0 UniRef100_C6TK51 UniRef100_C6TK51 UniRef100_C6TK51 UniRef100_C6TK51 UniRef100_A9TJ15 UniRef100_A9TJ15 UniRef100_A9TJ15 UniRef100_A9TJ15 UniRef100_C6TD06 UniRef100_C6TD06 UniRef100_C6TD06 UniRef100_C6TD06 UniRef100_Q1EMP1 UniRef100_Q1EMP1 UniRef100_Q1EMP1 UniRef100_Q1EMP1 UniRef100_B7FJ53 UniRef100_B7FJ53 UniRef100_B7FJ53 UniRef100_B7FJ53 UniRef100_A9NYQ2 UniRef100_A9NYQ2 UniRef100_A9NYQ2 UniRef100_A9NYQ2 UniRef100_Q2VL34 UniRef100_Q2VL34 UniRef100_Q2VL34 UniRef100_Q2VL34 UniRef100_Q56ZF6 UniRef100_Q56ZF6 UniRef100_A4QPL3 UniRef100_A4QPL3 UniRef100_A4QPL3 UniRef100_A4QPL3 UniRef100_A4QPL4 UniRef100_A4QPL4 UniRef100_A4QPL4 UniRef100_A4QPL4 UniRef100_Q3ECX1 UniRef100_Q3ECX1 UniRef100_Q3ECX1 UniRef100_Q3ECX1 UniRef100_A8HPM5 UniRef100_A8HPM5 UniRef100_A8HPM5 UniRef100_A8HPM5 UniRef100_A8HPM2 UniRef100_A8HPM2 UniRef100_A8HPM2 UniRef100_A8HPM2 UniRef100_B8AYN2 UniRef100_B8AYN2 UniRef100_B9FMS6 UniRef100_B9FMS6 UniRef100_C6SX13 UniRef100_C6SX13