AV776742 ( MPDL004h01_f )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV776742  MPDL004h01_f
         (558 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_B9RP51 RNA-dependent RNA polymerase, putative n=1 Tax=...   189   1e-46
UniRef100_B9HA49 Rna-dependent RNA polymerase n=1 Tax=Populus tr...   189   1e-46
UniRef100_B9IKW9 Rna-dependent RNA polymerase n=1 Tax=Populus tr...   188   2e-46
UniRef100_A7P5T3 Chromosome chr4 scaffold_6, whole genome shotgu...   179   2e-43
UniRef100_Q9SG02 Putative RNA-directed RNA polymerase; 73997-699...   176   8e-43
UniRef100_Q9LKP0 RNA-dependent RNA polymerase n=1 Tax=Arabidopsi...   176   8e-43
UniRef100_B3TNC1 RNA-dependent RNA polymerase n=1 Tax=Nicotiana ...   156   9e-37
UniRef100_Q647I5 Putative RNA-dependent RNA polymerase SDE1 n=1 ...   155   3e-36
UniRef100_B5BLP6 RNA-dependent RNA polymerase 6 n=1 Tax=Nicotian...   154   3e-36
UniRef100_A9CRC9 RNA-dependent RNA polymerase 6 n=1 Tax=Nicotian...   152   1e-35
UniRef100_Q8LHH9 Probable RNA-dependent RNA polymerase SHL2 n=1 ...   130   5e-29
UniRef100_C5XM68 Putative uncharacterized protein Sb03g022880 n=...   128   3e-28
UniRef100_Q8GUU1 Putative uncharacterized protein F16J10.8 n=1 T...   113   8e-24
UniRef100_Q58G28 Putative uncharacterized protein n=1 Tax=Arabid...   113   8e-24
UniRef100_Q9SHT7 Putative uncharacterized protein At2g05370 n=1 ...   110   7e-23
UniRef100_B9EXA5 Putative uncharacterized protein n=1 Tax=Oryza ...    79   2e-13
UniRef100_C5YIV2 Putative uncharacterized protein Sb07g006150 n=...    74   7e-12
UniRef100_C5Z766 Putative uncharacterized protein Sb10g025970 n=...    72   3e-11
UniRef100_C5Z764 Putative uncharacterized protein Sb10g025950 n=...    67   9e-10
graphical overview:
alignment
UniRef100_B9RP51 UniRef100_B9RP51 UniRef100_B9HA49 UniRef100_B9HA49 UniRef100_B9IKW9 UniRef100_B9IKW9 UniRef100_A7P5T3 UniRef100_A7P5T3 UniRef100_Q9SG02 UniRef100_Q9SG02 UniRef100_Q9LKP0 UniRef100_Q9LKP0 UniRef100_B3TNC1 UniRef100_B3TNC1 UniRef100_Q647I5 UniRef100_Q647I5 UniRef100_B5BLP6 UniRef100_B5BLP6 UniRef100_A9CRC9 UniRef100_A9CRC9 UniRef100_Q8LHH9 UniRef100_Q8LHH9 UniRef100_C5XM68 UniRef100_C5XM68 UniRef100_Q8GUU1 UniRef100_Q8GUU1 UniRef100_Q58G28 UniRef100_Q58G28 UniRef100_Q9SHT7 UniRef100_Q9SHT7 UniRef100_B9EXA5 UniRef100_B9EXA5 UniRef100_C5YIV2 UniRef100_C5YIV2 UniRef100_C5Z766 UniRef100_C5Z766