AV421542 ( MWM196c06_r )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV421542  MWM196c06_r
         (271 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_B9S9T2 RNA-binding protein, putative n=1 Tax=Ricinus c...   146   8e-34
UniRef100_UPI000198579B PREDICTED: similar to RNA recognition mo...   144   4e-33
UniRef100_Q9FM71 Genomic DNA, chromosome 5, P1 clone:MDF20 n=1 T...   122   1e-26
UniRef100_Q0WTD1 Putative uncharacterized protein At5g55670 (Fra...   122   1e-26
UniRef100_A7P459 Chromosome chr1 scaffold_5, whole genome shotgu...    88   3e-16
UniRef100_A5AK71 Putative uncharacterized protein n=1 Tax=Vitis ...    88   3e-16
UniRef100_B9HLD1 Predicted protein n=1 Tax=Populus trichocarpa R...    79   1e-13
UniRef100_UPI00019828BC PREDICTED: hypothetical protein n=1 Tax=...    77   5e-13
UniRef100_B9HTF7 Predicted protein n=1 Tax=Populus trichocarpa R...    77   8e-13
UniRef100_B9RMS1 RNA binding protein, putative n=1 Tax=Ricinus c...    74   7e-12
UniRef100_C5YJM6 Putative uncharacterized protein Sb07g028810 n=...    72   2e-11
UniRef100_Q6ZBP8 Os08g0490300 protein n=2 Tax=Oryza sativa RepID...    67   8e-10
UniRef100_Q651Z0 Os09g0476100 protein n=1 Tax=Oryza sativa Japon...    64   5e-09
UniRef100_A2Z2C1 Putative uncharacterized protein n=1 Tax=Oryza ...    64   5e-09
UniRef100_C5YJM5 Putative uncharacterized protein Sb07g028800 n=...    64   7e-09
UniRef100_Q8I5S6 Eukaryotic translation initiation factor 3 subu...    62   2e-08
UniRef100_Q7RG05 Eukaryotic translation initiation factor 3 subu...    61   4e-08
UniRef100_Q5SN81 Os01g0655400 protein n=1 Tax=Oryza sativa Japon...    59   2e-07
UniRef100_B8A6V1 Putative uncharacterized protein n=1 Tax=Oryza ...    59   2e-07
UniRef100_Q2QKC5 Pre-mRNA processing factor n=1 Tax=Triticum aes...    57   5e-07
UniRef100_UPI000186D269 conserved hypothetical protein n=1 Tax=P...    57   6e-07
UniRef100_A5JZU1 Eukaryotic translation initiation factor 3 subu...    57   6e-07
UniRef100_Q4YT27 Putative uncharacterized protein (Fragment) n=1...    57   8e-07
UniRef100_UPI000186E167 eukaryotic translation initiation factor...    56   1e-06
UniRef100_UPI00016E5BAB UPI00016E5BAB related cluster n=1 Tax=Ta...    56   1e-06
UniRef100_UPI00016E5BAA UPI00016E5BAA related cluster n=1 Tax=Ta...    56   1e-06
UniRef100_UPI00016E5B8F UPI00016E5B8F related cluster n=1 Tax=Ta...    56   1e-06
UniRef100_UPI00016E5B8E UPI00016E5B8E related cluster n=1 Tax=Ta...    56   1e-06
UniRef100_C3KH81 Negative elongation factor E n=1 Tax=Anoplopoma...    56   1e-06
UniRef100_Q54XF1 Putative uncharacterized protein n=1 Tax=Dictyo...    56   1e-06
UniRef100_UPI00019850D8 PREDICTED: hypothetical protein n=1 Tax=...    55   2e-06
UniRef100_A5C811 Putative uncharacterized protein n=1 Tax=Vitis ...    55   2e-06
UniRef100_B9IDT0 Predicted protein n=1 Tax=Populus trichocarpa R...    55   2e-06
UniRef100_B6SW59 ATP-dependent RNA helicase DDX23 n=1 Tax=Zea ma...    55   2e-06
UniRef100_Q55G70 Initiation factor eIF-4 gamma middle domain-con...    55   2e-06
UniRef100_C7YUC7 Putative uncharacterized protein n=1 Tax=Nectri...    55   2e-06
UniRef100_C0SBJ3 Putative uncharacterized protein n=1 Tax=Paraco...    55   3e-06
UniRef100_Q4SR86 Chromosome 11 SCAF14528, whole genome shotgun s...    54   4e-06
UniRef100_Q2QKC4 Pre-mRNA processing factor n=1 Tax=Triticum aes...    54   4e-06
UniRef100_B6UFH0 ATP-dependent RNA helicase DDX23 n=1 Tax=Zea ma...    54   4e-06
UniRef100_Q54LV5 RNA-binding region RNP-1 domain-containing prot...    54   4e-06
UniRef100_A1DHX8 Putative uncharacterized protein n=1 Tax=Neosar...    54   4e-06
UniRef100_UPI00019829CF PREDICTED: hypothetical protein n=1 Tax=...    54   5e-06
UniRef100_UPI0000F2BEEE PREDICTED: similar to mitochondrial tran...    54   5e-06
UniRef100_A7PNG4 Chromosome chr1 scaffold_22, whole genome shotg...    54   5e-06
UniRef100_Q54JM6 Putative uncharacterized protein n=1 Tax=Dictyo...    54   5e-06
UniRef100_Q54K36 Uncharacterized protein DDB_G0287625 n=1 Tax=Di...    54   5e-06
UniRef100_UPI000186DF31 conserved hypothetical protein n=1 Tax=P...    54   7e-06
UniRef100_B6AGW7 Putative uncharacterized protein n=1 Tax=Crypto...    54   7e-06
UniRef100_A2G2N0 Eukaryotic translation initiation factor 3 subu...    54   7e-06
UniRef100_B6QII3 Arginine rich protein n=1 Tax=Penicillium marne...    54   7e-06
UniRef100_Q54HS3 Histone-lysine N-methyltransferase set1 n=1 Tax...    54   7e-06
UniRef100_A9SK64 Predicted protein n=1 Tax=Physcomitrella patens...    53   9e-06
UniRef100_Q8I1T4 Cyclin-dependent kinase, putative n=1 Tax=Plasm...    53   9e-06
UniRef100_Q54TL3 SWAP/Surp domain-containing protein n=1 Tax=Dic...    53   9e-06
UniRef100_C1GJ14 Putative uncharacterized protein n=1 Tax=Paraco...    53   9e-06
graphical overview:
alignment
UniRef100_B9S9T2 UniRef100_B9S9T2 UniRef100_UPI000198579B UniRef100_UPI000198579B UniRef100_Q9FM71 UniRef100_Q9FM71 UniRef100_Q0WTD1 UniRef100_Q0WTD1 UniRef100_A7P459 UniRef100_A7P459 UniRef100_A5AK71 UniRef100_A5AK71 UniRef100_B9HLD1 UniRef100_B9HLD1 UniRef100_UPI00019828BC UniRef100_UPI00019828BC UniRef100_B9HTF7 UniRef100_B9HTF7 UniRef100_B9RMS1 UniRef100_B9RMS1 UniRef100_C5YJM6 UniRef100_C5YJM6 UniRef100_Q6ZBP8 UniRef100_Q6ZBP8 UniRef100_Q651Z0 UniRef100_Q651Z0 UniRef100_A2Z2C1 UniRef100_A2Z2C1 UniRef100_C5YJM5 UniRef100_C5YJM5 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q8I5S6 UniRef100_Q7RG05 UniRef100_Q7RG05 UniRef100_Q7RG05 UniRef100_Q7RG05 UniRef100_Q5SN81 UniRef100_Q5SN81 UniRef100_Q5SN81 UniRef100_Q5SN81 UniRef100_B8A6V1 UniRef100_B8A6V1 UniRef100_B8A6V1 UniRef100_B8A6V1 UniRef100_Q2QKC5 UniRef100_Q2QKC5 UniRef100_UPI000186D269 UniRef100_UPI000186D269 UniRef100_UPI000186D269 UniRef100_UPI000186D269 UniRef100_A5JZU1 UniRef100_A5JZU1 UniRef100_Q4YT27 UniRef100_Q4YT27 UniRef100_Q4YT27 UniRef100_Q4YT27 UniRef100_Q4YT27 UniRef100_Q4YT27 UniRef100_UPI000186E167 UniRef100_UPI000186E167 UniRef100_UPI00016E5BAB UniRef100_UPI00016E5BAB UniRef100_UPI00016E5BAA UniRef100_UPI00016E5BAA UniRef100_UPI00016E5B8F UniRef100_UPI00016E5B8F UniRef100_UPI00016E5B8E UniRef100_UPI00016E5B8E UniRef100_C3KH81 UniRef100_C3KH81 UniRef100_Q54XF1 UniRef100_Q54XF1 UniRef100_UPI00019850D8 UniRef100_UPI00019850D8 UniRef100_UPI00019850D8 UniRef100_UPI00019850D8 UniRef100_A5C811 UniRef100_A5C811 UniRef100_A5C811 UniRef100_A5C811 UniRef100_B9IDT0 UniRef100_B9IDT0 UniRef100_B6SW59 UniRef100_B6SW59 UniRef100_Q55G70 UniRef100_Q55G70 UniRef100_C7YUC7 UniRef100_C7YUC7 UniRef100_C0SBJ3 UniRef100_C0SBJ3 UniRef100_Q4SR86 UniRef100_Q4SR86 UniRef100_Q2QKC4 UniRef100_Q2QKC4 UniRef100_B6UFH0 UniRef100_B6UFH0 UniRef100_Q54LV5 UniRef100_Q54LV5 UniRef100_A1DHX8 UniRef100_A1DHX8 UniRef100_UPI00019829CF UniRef100_UPI00019829CF UniRef100_UPI0000F2BEEE UniRef100_UPI0000F2BEEE UniRef100_A7PNG4 UniRef100_A7PNG4 UniRef100_Q54JM6 UniRef100_Q54JM6 UniRef100_Q54K36 UniRef100_Q54K36 UniRef100_UPI000186DF31 UniRef100_UPI000186DF31 UniRef100_B6AGW7 UniRef100_B6AGW7 UniRef100_A2G2N0 UniRef100_A2G2N0 UniRef100_B6QII3 UniRef100_B6QII3 UniRef100_Q54HS3 UniRef100_Q54HS3 UniRef100_A9SK64 UniRef100_A9SK64 UniRef100_Q8I1T4 UniRef100_Q8I1T4 UniRef100_Q54TL3 UniRef100_Q54TL3