AV638586 ( HC088c04_r )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV638586  HC088c04_r
         (312 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_P12356 Photosystem I reaction center subunit III, chlo...   198   2e-49
UniRef100_Q1WLU7 Chloroplast photosystem I subunit F (Fragment) ...   192   1e-47
UniRef100_A9NWN3 Putative uncharacterized protein n=1 Tax=Picea ...   125   1e-27
UniRef100_C1E4J9 Photosystem I subunit III, chloroplast n=1 Tax=...   120   6e-26
UniRef100_P12355 Photosystem I reaction center subunit III, chlo...   120   6e-26
UniRef100_Q01B61 Photosystem I subunit III, chloroplast (IC) n=1...   119   8e-26
UniRef100_A9PI20 Putative uncharacterized protein n=1 Tax=Populu...   118   2e-25
UniRef100_B9RRQ0 Photosystem I reaction center subunit III, chlo...   117   3e-25
UniRef100_Q9ZSU5 Photosystem-1 F subunit n=1 Tax=Oryza sativa Re...   117   4e-25
UniRef100_A9RNK7 Predicted protein (Fragment) n=1 Tax=Physcomitr...   117   4e-25
UniRef100_Q9XQB4 Photosystem I reaction center subunit III n=1 T...   117   5e-25
UniRef100_A9NR55 Putative uncharacterized protein n=1 Tax=Picea ...   116   7e-25
UniRef100_A7QCS6 Chromosome undetermined scaffold_79, whole geno...   116   9e-25
UniRef100_A5B2H3 Putative uncharacterized protein n=1 Tax=Vitis ...   116   9e-25
UniRef100_UPI0000E12251 Os03g0778100 n=1 Tax=Oryza sativa Japoni...   115   2e-24
UniRef100_Q8S7H8 cDNA clone:001-016-D02, full insert sequence n=...   115   2e-24
UniRef100_B7FF89 Putative uncharacterized protein (Fragment) n=1...   115   2e-24
UniRef100_A9TWD4 Predicted protein n=1 Tax=Physcomitrella patens...   114   3e-24
UniRef100_P13192 Photosystem I reaction center subunit III, chlo...   114   3e-24
UniRef100_A4RVV3 PsaF, PSI-F, subunit III, photosystem I polypep...   114   3e-24
UniRef100_C5WZ31 Putative uncharacterized protein Sb01g006370 n=...   113   6e-24
UniRef100_B6SRI3 Photosystem I reaction center subunit III n=1 T...   113   6e-24
UniRef100_Q9SHE8 Photosystem I reaction center subunit III, chlo...   113   6e-24
UniRef100_B7FH55 Putative uncharacterized protein n=1 Tax=Medica...   112   1e-23
UniRef100_P46486 Photosystem I reaction center subunit III, chlo...   112   1e-23
UniRef100_A9SHP6 Predicted protein n=1 Tax=Physcomitrella patens...   111   2e-23
UniRef100_A9SUQ3 Predicted protein (Fragment) n=1 Tax=Physcomitr...   111   3e-23
UniRef100_Q84QE7 Putative photosystem I subunit III n=1 Tax=Nico...   110   4e-23
UniRef100_C1MPX0 Photosystem I subunit III, chloroplast n=1 Tax=...   109   8e-23
UniRef100_B2XTG5 Photosystem I reaction center subunit III n=2 T...   100   9e-20
UniRef100_A6MVU7 Photosystem I subunit III n=1 Tax=Rhodomonas sa...    99   1e-19
UniRef100_B8LEU6 PSAF, photosystem I reaction center subunit (Fr...    99   1e-19
UniRef100_Q1XDU4 Photosystem I reaction center subunit III n=1 T...    98   3e-19
UniRef100_P49483 Photosystem I reaction center subunit III n=1 T...    97   4e-19
UniRef100_A0T0M1 Photosystem I protein F n=1 Tax=Phaeodactylum t...    97   6e-19
UniRef100_P51193 Photosystem I reaction center subunit III n=1 T...    94   5e-18
UniRef100_Q0DN30 Os03g0778100 protein n=1 Tax=Oryza sativa Japon...    93   1e-17
UniRef100_B7T1S8 PSI plastocyanin-binding subunit III n=1 Tax=Va...    93   1e-17
UniRef100_O78457 Photosystem I reaction center subunit III n=1 T...    89   2e-16
UniRef100_Q4G3B9 Photosystem I subunit III n=1 Tax=Emiliania hux...    87   6e-16
UniRef100_Q6B948 Photosystem I reaction center subunit III n=1 T...    87   7e-16
UniRef100_P48115 Photosystem I reaction center subunit III n=1 T...    87   7e-16
UniRef100_Q7XYL7 Photosystem I protein PsaF n=1 Tax=Bigelowiella...    86   1e-15
UniRef100_Q9TI78 Photosystem I subunit III (Fragment) n=1 Tax=La...    80   5e-14
UniRef100_C6KIU1 Photosystem I reaction center subunit III n=1 T...    79   2e-13
UniRef100_Q85FS9 Photosystem I reaction center subunit II n=1 Ta...    72   1e-11
UniRef100_Q9TLW6 Photosystem I reaction center subunit III n=1 T...    69   2e-10
UniRef100_Q2JXH0 Photosystem I reaction center subunit III n=1 T...    59   2e-07
UniRef100_P31083 Photosystem I reaction center subunit III n=2 T...    58   4e-07
UniRef100_Q2JI24 Photosystem I reaction center subunit III n=1 T...    57   5e-07
UniRef100_A5GMV5 Photosystem I reaction centre PsaF protein n=1 ...    54   5e-06
UniRef100_A3Z5Y5 Photosystem I reaction center subunit III (PsaF...    54   5e-06
UniRef100_Q7U572 Photosystem I reaction center subunit III (PsaF...    54   7e-06
UniRef100_B4WS90 Photosystem I reaction center subunit III super...    54   7e-06
UniRef100_A4CRT9 Photosystem I reaction center subunit III (PsaF...    53   9e-06
graphical overview:
alignment
UniRef100_P12356 UniRef100_P12356 UniRef100_Q1WLU7 UniRef100_Q1WLU7 UniRef100_A9NWN3 UniRef100_A9NWN3 UniRef100_C1E4J9 UniRef100_C1E4J9 UniRef100_P12355 UniRef100_P12355 UniRef100_Q01B61 UniRef100_Q01B61 UniRef100_A9PI20 UniRef100_A9PI20 UniRef100_B9RRQ0 UniRef100_B9RRQ0 UniRef100_Q9ZSU5 UniRef100_Q9ZSU5 UniRef100_A9RNK7 UniRef100_A9RNK7 UniRef100_Q9XQB4 UniRef100_Q9XQB4 UniRef100_A9NR55 UniRef100_A9NR55 UniRef100_A7QCS6 UniRef100_A7QCS6 UniRef100_A5B2H3 UniRef100_A5B2H3 UniRef100_UPI0000E12251 UniRef100_UPI0000E12251 UniRef100_Q8S7H8 UniRef100_Q8S7H8 UniRef100_B7FF89 UniRef100_B7FF89 UniRef100_A9TWD4 UniRef100_A9TWD4 UniRef100_P13192 UniRef100_P13192 UniRef100_A4RVV3 UniRef100_A4RVV3 UniRef100_C5WZ31 UniRef100_C5WZ31 UniRef100_B6SRI3 UniRef100_B6SRI3 UniRef100_Q9SHE8 UniRef100_Q9SHE8 UniRef100_B7FH55 UniRef100_B7FH55 UniRef100_P46486 UniRef100_P46486 UniRef100_A9SHP6 UniRef100_A9SHP6 UniRef100_A9SUQ3 UniRef100_A9SUQ3 UniRef100_Q84QE7 UniRef100_Q84QE7 UniRef100_C1MPX0 UniRef100_C1MPX0 UniRef100_B2XTG5 UniRef100_B2XTG5 UniRef100_A6MVU7 UniRef100_A6MVU7 UniRef100_B8LEU6 UniRef100_B8LEU6 UniRef100_Q1XDU4 UniRef100_Q1XDU4 UniRef100_P49483 UniRef100_P49483 UniRef100_A0T0M1 UniRef100_A0T0M1 UniRef100_P51193 UniRef100_P51193 UniRef100_Q0DN30 UniRef100_Q0DN30 UniRef100_B7T1S8 UniRef100_B7T1S8 UniRef100_O78457 UniRef100_O78457 UniRef100_Q4G3B9 UniRef100_Q4G3B9 UniRef100_Q6B948 UniRef100_Q6B948 UniRef100_P48115 UniRef100_P48115 UniRef100_Q7XYL7 UniRef100_Q7XYL7 UniRef100_Q9TI78 UniRef100_Q9TI78 UniRef100_C6KIU1 UniRef100_C6KIU1 UniRef100_Q85FS9 UniRef100_Q85FS9 UniRef100_Q9TLW6 UniRef100_Q9TLW6 UniRef100_Q2JXH0 UniRef100_Q2JXH0 UniRef100_P31083 UniRef100_P31083 UniRef100_Q2JI24 UniRef100_Q2JI24 UniRef100_A5GMV5 UniRef100_A5GMV5 UniRef100_A3Z5Y5 UniRef100_A3Z5Y5 UniRef100_Q7U572 UniRef100_Q7U572 UniRef100_B4WS90 UniRef100_B4WS90