AV633880 ( HC026d10_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV633880  HC026d10_r
         (378 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q93WD2 Chlorophyll a-b binding protein CP29 n=2 Tax=Ch...   250   4e-65
UniRef100_A2SY49 Light-harvesting chlorophyll-a/b binding protei...   244   2e-63
UniRef100_A4QPJ4 Chloroplast light-harvesting protein CP29 Lhcb4...   174   3e-42
UniRef100_Q7XYQ5 Chlorophyll a/b-binding protein CP29 n=1 Tax=Bi...   163   6e-39
UniRef100_B5A4H8 Chlorophyll a/b binding protein CP29 n=1 Tax=Gy...   156   6e-37
UniRef100_B7SAW1 Chloroplast chlorophyll a/b binding protein cab...   145   2e-33
UniRef100_B9SLN2 Chlorophyll A/B binding protein, putative n=1 T...   144   3e-33
UniRef100_B7SB30 LHCB4 n=1 Tax=Bambusa oldhamii RepID=B7SB30_BAMOL    142   9e-33
UniRef100_Q6Z411 Os07g0558400 protein n=3 Tax=Oryza sativa RepID...   142   9e-33
UniRef100_Q9XQB2 Chlorophyll a/b binding protein CP29 n=1 Tax=Vi...   142   1e-32
UniRef100_C5XBI9 Putative uncharacterized protein Sb02g036260 n=...   142   1e-32
UniRef100_Q07473 Chlorophyll a-b binding protein CP29.1, chlorop...   142   1e-32
UniRef100_Q0PWS7 Chloroplast pigment-binding protein CP29 n=1 Ta...   142   2e-32
UniRef100_O24561 Putative uncharacterized protein n=1 Tax=Zea ma...   142   2e-32
UniRef100_B9SQ36 Chlorophyll A/B binding protein, putative n=1 T...   142   2e-32
UniRef100_B4FJG1 Putative uncharacterized protein n=1 Tax=Zea ma...   142   2e-32
UniRef100_C1K5D1 Chloroplast chlorophyll A-B binding protein n=1...   141   2e-32
UniRef100_Q9S7W1 Chlorophyll a-b binding protein CP29.3, chlorop...   141   2e-32
UniRef100_Q9XF88 Chlorophyll a-b binding protein CP29.2, chlorop...   141   2e-32
UniRef100_A9U3M1 Predicted protein n=1 Tax=Physcomitrella patens...   141   3e-32
UniRef100_A9T2F8 Predicted protein n=1 Tax=Physcomitrella patens...   141   3e-32
UniRef100_B9HHN0 Light-harvesting complex II protein Lhcb8 n=1 T...   140   3e-32
UniRef100_B7FIZ5 Putative uncharacterized protein n=1 Tax=Medica...   140   3e-32
UniRef100_A9PK34 Putative uncharacterized protein n=1 Tax=Populu...   140   4e-32
UniRef100_C6TDC5 Putative uncharacterized protein n=1 Tax=Glycin...   140   6e-32
UniRef100_B9HCM1 Light-harvesting complex II protein Lhcb4 n=2 T...   139   8e-32
UniRef100_A7PP40 Chromosome chr8 scaffold_23, whole genome shotg...   139   1e-31
UniRef100_B9IG87 Predicted protein n=1 Tax=Populus trichocarpa R...   135   2e-30
UniRef100_A9PJF0 Putative uncharacterized protein n=1 Tax=Populu...   135   2e-30
UniRef100_A9P071 Putative uncharacterized protein n=1 Tax=Picea ...   134   4e-30
UniRef100_A9NYR8 Putative uncharacterized protein n=1 Tax=Picea ...   134   4e-30
UniRef100_A9NKX0 Putative uncharacterized protein n=1 Tax=Picea ...   134   4e-30
UniRef100_A3BL40 Putative uncharacterized protein n=1 Tax=Oryza ...   129   8e-29
UniRef100_C0PRU3 Putative uncharacterized protein n=1 Tax=Picea ...   121   3e-26
UniRef100_A2SY24 Chloroplast light-harvesting complex protein CP...   120   5e-26
UniRef100_C1N6G9 Chlorophyll a/b-binding protein CP29, chloropla...   118   2e-25
UniRef100_C1EHQ9 Chlorophyll a/b-binding protein CP29, chloropla...   117   3e-25
UniRef100_Q3B9U8 CP29-like light-harvesting chlorophyll a/b bind...   117   4e-25
UniRef100_A4S8L5 Possibly CP29, chlorophyll a/b binding n=1 Tax=...   113   6e-24
UniRef100_A4QPH7 Chloroplast light-harvesting protein CP29 Lhcb4...   112   2e-23
UniRef100_B1N8L8 Chloroplast chlorophyll a/b-binding protein (Fr...   109   1e-22
UniRef100_C0HF02 Putative uncharacterized protein n=1 Tax=Zea ma...   106   7e-22
UniRef100_Q9XF88-2 Isoform 2 of Chlorophyll a-b binding protein ...   106   9e-22
UniRef100_C0PHS5 Putative uncharacterized protein n=1 Tax=Zea ma...    93   1e-17
UniRef100_C6TLL3 Putative uncharacterized protein n=1 Tax=Glycin...    73   9e-12
UniRef100_A9PFN3 Putative uncharacterized protein n=1 Tax=Populu...    64   5e-09
UniRef100_A4QPP3 Chloroplast light-harvesting complex I protein ...    61   3e-08
UniRef100_C1FD84 Chlorophyll a/b-binding protein, psi-associated...    59   2e-07
UniRef100_P36494 Chlorophyll a-b binding protein CP24, chloropla...    59   2e-07
UniRef100_P27524 Chlorophyll a-b binding protein CP24 10A, chlor...    56   1e-06
UniRef100_Q0PWS6 Chloroplast pigment-binding protein CP24 n=1 Ta...    56   1e-06
UniRef100_C5YAG3 Putative uncharacterized protein Sb06g032690 n=...    56   1e-06
UniRef100_B9T5J6 Chlorophyll A/B binding protein, putative n=1 T...    56   1e-06
UniRef100_B4FXB0 Chlorophyll a-b binding protein CP24 n=1 Tax=Ze...    56   1e-06
UniRef100_A9PFP4 Light-harvesting complex II protein Lhcb6 n=1 T...    56   1e-06
UniRef100_P27525 Chlorophyll a-b binding protein CP24 10B, chlor...    56   1e-06
UniRef100_B8PYF9 Chloroplast a/b binding protein cab-PhE11 n=1 T...    55   2e-06
UniRef100_B3VV93 Chloroplast light-harvesting complex II protein...    55   2e-06
UniRef100_B3VV84 Chloroplast light-harvesting complex II protein...    55   2e-06
UniRef100_B3VV83 Chloroplast light-harvesting complex II protein...    55   2e-06
UniRef100_B3VV74 Chloroplast light-harvesting complex II protein...    55   2e-06
UniRef100_A9PGD4 Light-harvesting complex II protein Lhcb6 n=2 T...    55   2e-06
UniRef100_UPI0001AEF82F putative type I polyketide synthase WcbR...    55   2e-06
UniRef100_Q9XQB6 Chlorophyll a/b-binding protein CP24 n=1 Tax=Vi...    55   2e-06
UniRef100_Q9XF90 Lhcb6 protein n=1 Tax=Arabidopsis thaliana RepI...    55   2e-06
UniRef100_Q9LMQ2 F7H2.16 protein n=1 Tax=Arabidopsis thaliana Re...    55   2e-06
UniRef100_B6T037 Chlorophyll a-b binding protein CP24 n=1 Tax=Ze...    55   2e-06
UniRef100_Q6DV17 Lhcb6 protein (Fragment) n=1 Tax=Brassica rapa ...    55   3e-06
UniRef100_C6T4E5 Putative uncharacterized protein n=1 Tax=Glycin...    55   3e-06
UniRef100_C6T0J3 Putative uncharacterized protein (Fragment) n=1...    55   3e-06
UniRef100_B6TPJ9 Putative uncharacterized protein n=1 Tax=Zea ma...    55   3e-06
UniRef100_A5ASW8 Chromosome chr12 scaffold_238, whole genome sho...    55   3e-06
UniRef100_A9RU32 Predicted protein n=1 Tax=Physcomitrella patens...    54   5e-06
UniRef100_Q7XV11 Os04g0457000 protein n=2 Tax=Oryza sativa RepID...    54   5e-06
UniRef100_Q41746 Chlorophyll a/b-binding apoprotein CP26 n=1 Tax...    54   7e-06
UniRef100_Q01JQ3 H0523F07.10 protein n=1 Tax=Oryza sativa RepID=...    53   9e-06
UniRef100_B3VV80 Chloroplast light-harvesting complex II protein...    53   9e-06
UniRef100_B3VV73 Chloroplast light-harvesting complex II protein...    53   9e-06
UniRef100_B3VV72 Chloroplast light-harvesting complex II protein...    53   9e-06
graphical overview:
alignment
UniRef100_Q93WD2 UniRef100_Q93WD2 UniRef100_A2SY49 UniRef100_A2SY49 UniRef100_A4QPJ4 UniRef100_A4QPJ4 UniRef100_Q7XYQ5 UniRef100_Q7XYQ5 UniRef100_B5A4H8 UniRef100_B5A4H8 UniRef100_B7SAW1 UniRef100_B7SAW1 UniRef100_B9SLN2 UniRef100_B9SLN2 UniRef100_B7SB30 UniRef100_B7SB30 UniRef100_Q6Z411 UniRef100_Q6Z411 UniRef100_Q9XQB2 UniRef100_Q9XQB2 UniRef100_C5XBI9 UniRef100_C5XBI9 UniRef100_Q07473 UniRef100_Q07473 UniRef100_Q0PWS7 UniRef100_Q0PWS7 UniRef100_O24561 UniRef100_O24561 UniRef100_B9SQ36 UniRef100_B9SQ36 UniRef100_B4FJG1 UniRef100_B4FJG1 UniRef100_C1K5D1 UniRef100_C1K5D1 UniRef100_Q9S7W1 UniRef100_Q9S7W1 UniRef100_Q9XF88 UniRef100_Q9XF88 UniRef100_A9U3M1 UniRef100_A9U3M1 UniRef100_A9T2F8 UniRef100_A9T2F8 UniRef100_B9HHN0 UniRef100_B9HHN0 UniRef100_B7FIZ5 UniRef100_B7FIZ5 UniRef100_A9PK34 UniRef100_A9PK34 UniRef100_C6TDC5 UniRef100_C6TDC5 UniRef100_B9HCM1 UniRef100_B9HCM1 UniRef100_A7PP40 UniRef100_A7PP40 UniRef100_B9IG87 UniRef100_B9IG87 UniRef100_A9PJF0 UniRef100_A9PJF0 UniRef100_A9P071 UniRef100_A9P071 UniRef100_A9NYR8 UniRef100_A9NYR8 UniRef100_A9NKX0 UniRef100_A9NKX0 UniRef100_A3BL40 UniRef100_A3BL40 UniRef100_C0PRU3 UniRef100_C0PRU3 UniRef100_A2SY24 UniRef100_A2SY24 UniRef100_C1N6G9 UniRef100_C1N6G9 UniRef100_C1EHQ9 UniRef100_C1EHQ9 UniRef100_Q3B9U8 UniRef100_Q3B9U8 UniRef100_A4S8L5 UniRef100_A4S8L5 UniRef100_A4QPH7 UniRef100_A4QPH7 UniRef100_B1N8L8 UniRef100_B1N8L8 UniRef100_C0HF02 UniRef100_C0HF02 UniRef100_Q9XF88-2 UniRef100_Q9XF88-2 UniRef100_C0PHS5 UniRef100_C0PHS5 UniRef100_C6TLL3 UniRef100_C6TLL3 UniRef100_A9PFN3 UniRef100_A9PFN3 UniRef100_A4QPP3 UniRef100_A4QPP3 UniRef100_C1FD84 UniRef100_C1FD84 UniRef100_P36494 UniRef100_P36494 UniRef100_P27524 UniRef100_P27524 UniRef100_Q0PWS6 UniRef100_Q0PWS6 UniRef100_C5YAG3 UniRef100_C5YAG3 UniRef100_B9T5J6 UniRef100_B9T5J6 UniRef100_B4FXB0 UniRef100_B4FXB0 UniRef100_A9PFP4 UniRef100_A9PFP4 UniRef100_P27525 UniRef100_P27525 UniRef100_B8PYF9 UniRef100_B8PYF9 UniRef100_B3VV93 UniRef100_B3VV93 UniRef100_B3VV84 UniRef100_B3VV84 UniRef100_B3VV83 UniRef100_B3VV83 UniRef100_B3VV74 UniRef100_B3VV74 UniRef100_A9PGD4 UniRef100_A9PGD4 UniRef100_UPI0001AEF82F UniRef100_UPI0001AEF82F UniRef100_Q9XQB6 UniRef100_Q9XQB6 UniRef100_Q9XF90 UniRef100_Q9XF90 UniRef100_Q9LMQ2 UniRef100_Q9LMQ2 UniRef100_B6T037 UniRef100_B6T037 UniRef100_Q6DV17 UniRef100_Q6DV17 UniRef100_C6T4E5 UniRef100_C6T4E5 UniRef100_C6T0J3 UniRef100_C6T0J3 UniRef100_B6TPJ9 UniRef100_B6TPJ9 UniRef100_A5ASW8 UniRef100_A5ASW8 UniRef100_A9RU32 UniRef100_A9RU32 UniRef100_Q7XV11 UniRef100_Q7XV11 UniRef100_Q41746 UniRef100_Q41746 UniRef100_Q01JQ3 UniRef100_Q01JQ3 UniRef100_B3VV80 UniRef100_B3VV80 UniRef100_B3VV73 UniRef100_B3VV73