AV620855 ( LC027g02_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV620855  LC027g02_r
         (531 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_A8III5 Photosystem II reaction center psb28 protein n=...   288   2e-76
UniRef100_C5XHQ4 Photosystem II reaction center psb28 protein n=...   157   6e-37
UniRef100_A9SHP3 Photosystem II reaction center psb28 protein n=...   154   4e-36
UniRef100_A9TT51 Photosystem II reaction center psb28 protein n=...   153   6e-36
UniRef100_B6TYC5 Photosystem II reaction center psb28 protein n=...   152   1e-35
UniRef100_A7Q1K3 Photosystem II reaction center psb28 protein n=...   150   4e-35
UniRef100_Q8W0Y8 Photosystem II reaction center PSB28 protein, c...   149   2e-34
UniRef100_Q0JG75 Photosystem II reaction center PSB28 protein, c...   148   2e-34
UniRef100_B6SRI0 Photosystem II reaction center psb28 protein n=...   147   4e-34
UniRef100_A2WYW0 Photosystem II reaction center psb28 protein n=...   147   4e-34
UniRef100_B9SKL9 Photosystem II reaction center psb28 protein n=...   147   5e-34
UniRef100_C6SZM2 Photosystem II reaction center psb28 protein n=...   145   2e-33
UniRef100_B9GRD0 Photosystem II reaction center psb28 protein n=...   145   2e-33
UniRef100_A9PHJ0 Photosystem II reaction center psb28 protein n=...   144   4e-33
UniRef100_C1MYZ0 Photosystem II reaction center psb28 protein n=...   141   3e-32
UniRef100_C1E7N8 Photosystem II reaction center psb28 protein n=...   141   3e-32
UniRef100_Q00UI6 Photosystem II reaction center psb28 protein, c...   141   3e-32
UniRef100_A4S851 Photosystem II reaction center psb28 protein n=...   138   3e-31
UniRef100_A9NPG6 Photosystem II reaction center psb28 protein n=...   137   4e-31
UniRef100_B2J5G7 Photosystem II reaction center psb28 protein n=...   137   6e-31
UniRef100_B1WXW2 Photosystem II reaction center psb28 protein n=...   136   1e-30
UniRef100_Q8DLJ8 Photosystem II reaction center psb28 protein n=...   134   3e-30
UniRef100_Q3MFL9 Photosystem II reaction center psb28 protein n=...   134   5e-30
UniRef100_Q8YYP5 Photosystem II reaction center psb28 protein n=...   134   5e-30
UniRef100_A3Z7B0 Photosystem II reaction center psb28 protein n=...   133   9e-30
UniRef100_UPI0000DD8EAB Os01g0938100 n=1 Tax=Oryza sativa Japoni...   132   1e-29
UniRef100_B8C304 Photosystem II reaction center psb28 protein (F...   132   1e-29
UniRef100_B0CE32 Photosystem II reaction center psb28 protein n=...   132   1e-29
UniRef100_B4W337 Photosystem II reaction center psb28 protein n=...   132   2e-29
UniRef100_Q1XDE0 Photosystem II reaction center psb28 protein n=...   132   2e-29
UniRef100_O78418 Photosystem II reaction center psb28 protein n=...   132   2e-29
UniRef100_P51347 Photosystem II reaction center psb28 protein n=...   131   3e-29
UniRef100_Q6B8Z7 Photosystem II reaction center psb28 protein n=...   131   3e-29
UniRef100_Q31ML0 Photosystem II reaction center psb28 protein n=...   130   6e-29
UniRef100_P48264 Photosystem II reaction center psb28 protein n=...   130   8e-29
UniRef100_B7K2E0 Photosystem II reaction center psb28 protein n=...   130   8e-29
UniRef100_P49508 Photosystem II reaction center psb28 protein n=...   129   1e-28
UniRef100_B9YGF9 Photosystem II reaction center psb28 protein n=...   129   2e-28
UniRef100_A0T0W9 Photosystem II reaction center psb28 protein n=...   128   3e-28
UniRef100_Q55356 Photosystem II reaction center psb28 protein n=...   128   3e-28
UniRef100_A6MVQ3 Photosystem II reaction center psb28 protein n=...   126   8e-28
UniRef100_Q9TLZ2 Photosystem II reaction center psb28 protein n=...   126   8e-28
UniRef100_B4WSH1 Photosystem II reaction center psb28 protein n=...   126   1e-27
UniRef100_A3YZV7 Photosystem II reaction center psb28 protein n=...   126   1e-27
UniRef100_A0T0H5 Photosystem II reaction center psb28 protein n=...   126   1e-27
UniRef100_Q4BX83 Photosystem II reaction center psb28 protein n=...   125   1e-27
UniRef100_B5IKE3 Photosystem II reaction center psb28 protein n=...   125   1e-27
UniRef100_B1XL01 Photosystem II reaction center psb28 protein n=...   125   1e-27
UniRef100_A0YUC0 Photosystem II reaction center psb28 protein n=...   125   2e-27
UniRef100_B7K9Y7 Photosystem II reaction center psb28 protein n=...   123   7e-27
UniRef100_B5W4B0 Photosystem II reaction center psb28 protein n=...   123   9e-27
UniRef100_B4B1N9 Photosystem II reaction center psb28 protein n=...   122   1e-26
UniRef100_A5GTJ8 Photosystem II reaction center psb28 protein n=...   122   2e-26
UniRef100_Q05TH4 Photosystem II reaction center psb28 protein n=...   122   2e-26
UniRef100_B0JGJ5 Photosystem II reaction center psb28 protein n=...   122   2e-26
UniRef100_Q85G21 Photosystem II reaction center psb28 protein n=...   121   4e-26
UniRef100_Q112E8 Photosystem II reaction center psb28 protein n=...   120   5e-26
UniRef100_A8YBJ0 Photosystem II reaction center psb28 protein n=...   120   8e-26
UniRef100_B2XT44 Photosystem II reaction center psb28 protein n=...   119   1e-25
UniRef100_B8HK72 Photosystem II reaction center psb28 protein n=...   119   1e-25
UniRef100_B7T1U3 Photosystem II reaction center psb28 protein n=...   119   1e-25
UniRef100_A9B9Y9 Photosystem II reaction center psb28 protein n=...   117   5e-25
UniRef100_Q0I9T4 Photosystem II reaction center psb28 protein n=...   116   9e-25
UniRef100_B1X424 Photosystem II reaction center psb28 protein n=...   115   1e-24
UniRef100_A4CU97 Photosystem II reaction center psb28 protein n=...   115   3e-24
UniRef100_A5GLG6 Photosystem II reaction center psb28 protein n=...   115   3e-24
UniRef100_D0CIL4 Photosystem II reaction center protein Psb28 n=...   114   4e-24
UniRef100_Q3AKD0 Photosystem II reaction center psb28 protein n=...   114   4e-24
UniRef100_Q7U7C0 Photosystem II reaction center psb28 protein n=...   114   6e-24
UniRef100_Q7TV11 Photosystem II reaction center psb28 protein n=...   114   6e-24
UniRef100_A2CA72 Photosystem II reaction center psb28 protein n=...   113   1e-23
UniRef100_Q066J5 Photosystem II reaction center psb28 protein n=...   112   1e-23
UniRef100_Q3AXG3 Photosystem II reaction center psb28 protein n=...   112   1e-23
UniRef100_Q7VCG9 Photosystem II reaction center psb28 protein n=...   108   2e-22
UniRef100_B7FMR0 Photosystem II reaction center psb28 protein n=...   108   3e-22
UniRef100_A2BWQ5 Photosystem II reaction center psb28 protein n=...   107   7e-22
UniRef100_A8G4P8 Photosystem II reaction center psb28 protein n=...   105   2e-21
UniRef100_Q7TU94 Photosystem II reaction center psb28 protein n=...   105   3e-21
UniRef100_Q31B11 Photosystem II reaction center psb28 protein n=...   104   3e-21
UniRef100_A3PCT1 Photosystem II reaction center psb28 protein n=...   104   4e-21
UniRef100_B9P1S4 Photosystem II reaction center psb28 protein n=...   103   6e-21
UniRef100_A2BR07 Photosystem II reaction center psb28 protein n=...   103   6e-21
UniRef100_C4J3U8 Putative uncharacterized protein n=1 Tax=Zea ma...    97   5e-19
UniRef100_C4IY75 Putative uncharacterized protein n=1 Tax=Zea ma...    97   5e-19
UniRef100_Q2JL50 Photosystem II reaction center psb28 protein n=...    94   8e-18
UniRef100_Q2JUM7 Photosystem II reaction center psb28 protein n=...    93   1e-17
UniRef100_Q46LK1 Photosystem II reaction center psb28 protein n=...    67   6e-10
UniRef100_A2C1G5 Photosystem II reaction center psb28 protein n=...    66   2e-09
UniRef100_B1WU78 Photosystem II reaction center psb28 protein n=...    59   3e-07
UniRef100_Q7NLT0 Photosystem II reaction center psb28 protein n=...    58   5e-07
UniRef100_B4W2V5 Photosystem II reaction center psb28 protein n=...    58   5e-07
UniRef100_A3IU46 Photosystem II reaction center psb28 protein n=...    57   6e-07
UniRef100_Q4C1Y9 Photosystem II reaction center psb28 protein n=...    57   1e-06
UniRef100_A0YTS3 Photosystem II reaction center psb28 protein n=...    56   2e-06
UniRef100_Q3M6Q3 Photosystem II reaction center psb28 protein n=...    55   4e-06
UniRef100_A8QM18 Photosystem II reaction center psb28 protein n=...    54   7e-06
graphical overview:
alignment
UniRef100_A8III5 UniRef100_A8III5 UniRef100_C5XHQ4 UniRef100_C5XHQ4 UniRef100_A9SHP3 UniRef100_A9SHP3 UniRef100_A9TT51 UniRef100_A9TT51 UniRef100_B6TYC5 UniRef100_B6TYC5 UniRef100_A7Q1K3 UniRef100_A7Q1K3 UniRef100_Q8W0Y8 UniRef100_Q8W0Y8 UniRef100_Q0JG75 UniRef100_Q0JG75 UniRef100_B6SRI0 UniRef100_B6SRI0 UniRef100_A2WYW0 UniRef100_A2WYW0 UniRef100_B9SKL9 UniRef100_B9SKL9 UniRef100_C6SZM2 UniRef100_C6SZM2 UniRef100_B9GRD0 UniRef100_B9GRD0 UniRef100_A9PHJ0 UniRef100_A9PHJ0 UniRef100_C1MYZ0 UniRef100_C1MYZ0 UniRef100_C1E7N8 UniRef100_C1E7N8 UniRef100_Q00UI6 UniRef100_Q00UI6 UniRef100_A4S851 UniRef100_A4S851 UniRef100_A9NPG6 UniRef100_A9NPG6 UniRef100_B2J5G7 UniRef100_B2J5G7 UniRef100_B1WXW2 UniRef100_B1WXW2 UniRef100_Q8DLJ8 UniRef100_Q8DLJ8 UniRef100_Q3MFL9 UniRef100_Q3MFL9 UniRef100_Q8YYP5 UniRef100_Q8YYP5 UniRef100_A3Z7B0 UniRef100_A3Z7B0 UniRef100_UPI0000DD8EAB UniRef100_UPI0000DD8EAB UniRef100_B8C304 UniRef100_B8C304 UniRef100_B0CE32 UniRef100_B0CE32 UniRef100_B4W337 UniRef100_B4W337 UniRef100_Q1XDE0 UniRef100_Q1XDE0 UniRef100_O78418 UniRef100_O78418 UniRef100_P51347 UniRef100_P51347 UniRef100_Q6B8Z7 UniRef100_Q6B8Z7 UniRef100_Q31ML0 UniRef100_Q31ML0 UniRef100_P48264 UniRef100_P48264 UniRef100_B7K2E0 UniRef100_B7K2E0 UniRef100_P49508 UniRef100_P49508 UniRef100_B9YGF9 UniRef100_B9YGF9 UniRef100_A0T0W9 UniRef100_A0T0W9 UniRef100_Q55356 UniRef100_Q55356 UniRef100_A6MVQ3 UniRef100_A6MVQ3 UniRef100_Q9TLZ2 UniRef100_Q9TLZ2 UniRef100_B4WSH1 UniRef100_B4WSH1 UniRef100_A3YZV7 UniRef100_A3YZV7 UniRef100_A0T0H5 UniRef100_A0T0H5 UniRef100_Q4BX83 UniRef100_Q4BX83 UniRef100_B5IKE3 UniRef100_B5IKE3 UniRef100_B1XL01 UniRef100_B1XL01 UniRef100_A0YUC0 UniRef100_A0YUC0 UniRef100_B7K9Y7 UniRef100_B7K9Y7 UniRef100_B5W4B0 UniRef100_B5W4B0 UniRef100_B4B1N9 UniRef100_B4B1N9 UniRef100_A5GTJ8 UniRef100_A5GTJ8 UniRef100_Q05TH4 UniRef100_Q05TH4 UniRef100_B0JGJ5 UniRef100_B0JGJ5 UniRef100_Q85G21 UniRef100_Q85G21 UniRef100_Q112E8 UniRef100_Q112E8 UniRef100_A8YBJ0 UniRef100_A8YBJ0 UniRef100_B2XT44 UniRef100_B2XT44 UniRef100_B8HK72 UniRef100_B8HK72 UniRef100_B7T1U3 UniRef100_B7T1U3 UniRef100_A9B9Y9 UniRef100_A9B9Y9 UniRef100_Q0I9T4 UniRef100_Q0I9T4 UniRef100_B1X424 UniRef100_B1X424 UniRef100_A4CU97 UniRef100_A4CU97 UniRef100_A5GLG6 UniRef100_A5GLG6 UniRef100_D0CIL4 UniRef100_D0CIL4 UniRef100_Q3AKD0 UniRef100_Q3AKD0 UniRef100_Q7U7C0 UniRef100_Q7U7C0 UniRef100_Q7TV11 UniRef100_Q7TV11 UniRef100_A2CA72 UniRef100_A2CA72 UniRef100_Q066J5 UniRef100_Q066J5 UniRef100_Q3AXG3 UniRef100_Q3AXG3 UniRef100_Q7VCG9 UniRef100_Q7VCG9 UniRef100_B7FMR0 UniRef100_B7FMR0 UniRef100_A2BWQ5 UniRef100_A2BWQ5 UniRef100_A8G4P8 UniRef100_A8G4P8 UniRef100_Q7TU94 UniRef100_Q7TU94 UniRef100_Q31B11 UniRef100_Q31B11 UniRef100_A3PCT1 UniRef100_A3PCT1 UniRef100_B9P1S4 UniRef100_B9P1S4 UniRef100_A2BR07 UniRef100_A2BR07 UniRef100_C4J3U8 UniRef100_C4J3U8 UniRef100_C4IY75 UniRef100_C4IY75 UniRef100_Q2JL50 UniRef100_Q2JL50 UniRef100_Q2JUM7 UniRef100_Q2JUM7 UniRef100_Q46LK1 UniRef100_Q46LK1 UniRef100_A2C1G5 UniRef100_A2C1G5 UniRef100_B1WU78 UniRef100_B1WU78 UniRef100_Q7NLT0 UniRef100_Q7NLT0 UniRef100_B4W2V5 UniRef100_B4W2V5 UniRef100_A3IU46 UniRef100_A3IU46 UniRef100_Q4C1Y9 UniRef100_Q4C1Y9 UniRef100_A0YTS3 UniRef100_A0YTS3 UniRef100_Q3M6Q3 UniRef100_Q3M6Q3