AV396180 ( CL54d10_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV396180  CL54d10_r
         (535 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q9ZSJ4 Chlorophyll a-b binding protein of LHCII n=1 Ta...    76   1e-12
UniRef100_Q93VE0 Light-harvesting chlorophyll-a/b binding protei...    61   6e-08
UniRef100_A2SY43 Light-harvesting chlorophyll-a/b binding protei...    61   6e-08
UniRef100_Q9ZSV2 Chlorophyll a/b binding protein n=1 Tax=Acetabu...    59   3e-07
UniRef100_A4QPL1 Chloroplast light-harvesting complex II protein...    58   4e-07
UniRef100_A4QPJ5 Chloroplast light-harvesting complex II protein...    58   4e-07
UniRef100_Q9AXF6 Light-harvesting complex II protein n=1 Tax=Chl...    58   5e-07
UniRef100_Q93WE0 Light-harvesting chlorophyll-a/b binding protei...    58   5e-07
UniRef100_A2SY45 Light-harvesting chlorophyll-a/b binding protei...    58   5e-07
UniRef100_A2SY44 Light-harvesting chlorophyll-a/b binding protei...    58   5e-07
UniRef100_P20865 Chlorophyll a-b binding protein of LHCII type I...    58   5e-07
UniRef100_A8J287 Chloropyll a-b binding protein of LHCII type I,...    57   8e-07
UniRef100_A8J264 Chloropyll a-b binding protein of LHCII n=1 Tax...    57   8e-07
UniRef100_A2SY48 Light-harvesting chlorophyll-a/b binding protei...    57   8e-07
UniRef100_P14273 Chlorophyll a-b binding protein of LHCII type I...    57   8e-07
UniRef100_Q9ZSJ5 Light harvesting complex II protein n=1 Tax=Chl...    57   1e-06
UniRef100_A8J270 Chlorophyll a-b binding protein of LHCII n=1 Ta...    57   1e-06
UniRef100_Q93WL4 Light-harvesting chlorophyll-a/b binding protei...    56   1e-06
UniRef100_Q8S3U0 Major light-harvesting complex II protein m10 n...    56   1e-06
UniRef100_Q8S3T8 Major light-harvesting complex II protein m7 n=...    56   1e-06
UniRef100_Q5S3H0 Chloroplast major light-harvesting complex II p...    56   1e-06
UniRef100_Q1WLW0 Chloroplast light-harvesting chlorophyll-a/b bi...    56   2e-06
UniRef100_Q8S3T9 Chlorophyll a-b binding protein of LHCII n=1 Ta...    55   4e-06
UniRef100_A2SY47 Light-harvesting chlorophyll-a/b binding protei...    55   4e-06
UniRef100_Q6ZF30 Os07g0562700 protein n=1 Tax=Oryza sativa Japon...    54   7e-06
UniRef100_A9TL35 Predicted protein n=1 Tax=Physcomitrella patens...    54   7e-06
UniRef100_A9SGM1 Predicted protein n=1 Tax=Physcomitrella patens...    54   7e-06
UniRef100_A9S6F4 Predicted protein n=1 Tax=Physcomitrella patens...    54   7e-06
UniRef100_A9RNP2 Predicted protein n=1 Tax=Physcomitrella patens...    54   7e-06
UniRef100_A9RBQ5 Predicted protein n=1 Tax=Physcomitrella patens...    54   7e-06
UniRef100_A9RBQ3 Predicted protein n=1 Tax=Physcomitrella patens...    54   7e-06
UniRef100_A9RAS2 Predicted protein n=1 Tax=Physcomitrella patens...    54   7e-06
UniRef100_A9RAR8 Predicted protein n=1 Tax=Physcomitrella patens...    54   7e-06
UniRef100_A2YMN1 Putative uncharacterized protein n=1 Tax=Oryza ...    54   7e-06
UniRef100_A4QPL2 Chloroplast light-harvesting complex II protein...    54   9e-06
UniRef100_A4QPK8 Chloroplast light-harvesting complex II protein...    54   9e-06
UniRef100_A4QPK7 Chloroplast light-harvesting complex II protein...    54   9e-06
UniRef100_P22686 Chlorophyll a-b binding protein of LHCII type I...    54   9e-06
graphical overview:
alignment
UniRef100_Q9ZSJ4 UniRef100_Q9ZSJ4 UniRef100_Q93VE0 UniRef100_Q93VE0 UniRef100_A2SY43 UniRef100_A2SY43 UniRef100_Q9ZSV2 UniRef100_Q9ZSV2 UniRef100_A4QPL1 UniRef100_A4QPL1 UniRef100_A4QPJ5 UniRef100_A4QPJ5 UniRef100_Q9AXF6 UniRef100_Q9AXF6 UniRef100_Q93WE0 UniRef100_Q93WE0 UniRef100_A2SY45 UniRef100_A2SY45 UniRef100_A2SY44 UniRef100_A2SY44 UniRef100_P20865 UniRef100_P20865 UniRef100_A8J287 UniRef100_A8J287 UniRef100_A8J264 UniRef100_A8J264 UniRef100_A2SY48 UniRef100_A2SY48 UniRef100_P14273 UniRef100_P14273 UniRef100_Q9ZSJ5 UniRef100_Q9ZSJ5 UniRef100_A8J270 UniRef100_A8J270 UniRef100_Q93WL4 UniRef100_Q93WL4 UniRef100_Q8S3U0 UniRef100_Q8S3U0 UniRef100_Q8S3T8 UniRef100_Q8S3T8 UniRef100_Q5S3H0 UniRef100_Q5S3H0 UniRef100_Q1WLW0 UniRef100_Q1WLW0 UniRef100_Q8S3T9 UniRef100_Q8S3T9 UniRef100_A2SY47 UniRef100_A2SY47 UniRef100_Q6ZF30 UniRef100_Q6ZF30 UniRef100_A9TL35 UniRef100_A9TL35 UniRef100_A9SGM1 UniRef100_A9SGM1 UniRef100_A9S6F4 UniRef100_A9S6F4 UniRef100_A9RNP2 UniRef100_A9RNP2 UniRef100_A9RBQ5 UniRef100_A9RBQ5 UniRef100_A9RBQ3 UniRef100_A9RBQ3 UniRef100_A9RAS2 UniRef100_A9RAS2 UniRef100_A9RAR8 UniRef100_A9RAR8 UniRef100_A2YMN1 UniRef100_A2YMN1 UniRef100_A4QPL2 UniRef100_A4QPL2 UniRef100_A4QPK8 UniRef100_A4QPK8 UniRef100_A4QPK7 UniRef100_A4QPK7