AV390663 ( CM059f10_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV390663  CM059f10_r
         (547 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_A8JHU3 RNA polymerase subunit n=1 Tax=Chlamydomonas re...   145   2e-33
UniRef100_A7NYN7 Chromosome chr6 scaffold_3, whole genome shotgu...    82   3e-14
UniRef100_C6T2I2 Putative uncharacterized protein n=1 Tax=Glycin...    81   4e-14
UniRef100_C1E3U1 Predicted protein n=1 Tax=Micromonas sp. RCC299...    81   6e-14
UniRef100_C5YTE8 Putative uncharacterized protein Sb08g005640 n=...    80   1e-13
UniRef100_B9GIX0 Predicted protein n=1 Tax=Populus trichocarpa R...    80   1e-13
UniRef100_C5Y1Q7 Putative uncharacterized protein Sb05g008640 n=...    77   1e-12
UniRef100_C4Y1Z9 Putative uncharacterized protein n=1 Tax=Clavis...    77   1e-12
UniRef100_UPI000180B7C9 PREDICTED: similar to LOC494863 protein ...    76   1e-12
UniRef100_C1N3U7 Predicted protein n=1 Tax=Micromonas pusilla CC...    76   2e-12
UniRef100_A9SFX7 Predicted protein n=1 Tax=Physcomitrella patens...    76   2e-12
UniRef100_Q2QWI0 Os12g0194700 protein n=2 Tax=Oryza sativa RepID...    75   3e-12
UniRef100_Q6C4D6 YALI0E27676p n=1 Tax=Yarrowia lipolytica RepID=...    75   3e-12
UniRef100_Q59LT9 Potential RNA Polymerase I and III shared subun...    75   3e-12
UniRef100_C4YL76 DNA-directed RNA polymerases I and III 14 kDa p...    75   3e-12
UniRef100_C4R752 Putative uncharacterized protein n=1 Tax=Pichia...    75   4e-12
UniRef100_Q6FLF2 Strain CBS138 chromosome L complete sequence n=...    74   7e-12
UniRef100_UPI0000610BFD PREDICTED: similar to RNA polymerase I 1...    73   1e-11
UniRef100_Q1RMG8 DNA-directed RNA polymerases I and III subunit ...    73   1e-11
UniRef100_UPI0001924FE8 PREDICTED: similar to polymerase (RNA) I...    73   2e-11
UniRef100_UPI000194E32E PREDICTED: similar to DNA-directed RNA p...    72   2e-11
UniRef100_C1BEM0 DNA-directed RNA polymerase I subunit D n=1 Tax...    72   2e-11
UniRef100_UPI00004BE302 UPI00004BE302 related cluster n=1 Tax=Ca...    72   3e-11
UniRef100_C0H7G7 DNA-directed RNA polymerases I and III subunit ...    72   3e-11
UniRef100_B5XCF3 DNA-directed RNA polymerases I and III subunit ...    72   3e-11
UniRef100_C5M4D1 DNA-directed RNA polymerases I and III 14 kDa p...    72   3e-11
UniRef100_UPI00017F079B PREDICTED: similar to DNA-directed RNA p...    72   3e-11
UniRef100_B2BXR4 RNApol24 n=1 Tax=Cleome spinosa RepID=B2BXR4_9ROSI    72   3e-11
UniRef100_Q755Q7 AFL220Cp n=1 Tax=Eremothecium gossypii RepID=Q7...    72   3e-11
UniRef100_B9WL57 DNA-directed RNA polymerase subunit, common to ...    72   3e-11
UniRef100_C3YRU6 Putative uncharacterized protein (Fragment) n=2...    71   5e-11
UniRef100_UPI00006D2CA2 PREDICTED: polymerase (RNA) I polypeptid...    71   5e-11
UniRef100_UPI0000F31A28 UPI0000F31A28 related cluster n=1 Tax=Bo...    71   5e-11
UniRef100_A9NNU7 Putative uncharacterized protein n=1 Tax=Picea ...    71   5e-11
UniRef100_C5DGY8 KLTH0D09350p n=1 Tax=Lachancea thermotolerans C...    71   5e-11
UniRef100_Q9Y2S0 DNA-directed RNA polymerases I and III subunit ...    71   5e-11
UniRef100_UPI000155D07A PREDICTED: similar to LOC494863 protein ...    71   6e-11
UniRef100_P28000 DNA-directed RNA polymerases I and III subunit ...    71   6e-11
UniRef100_P97304 DNA-directed RNA polymerases I and III subunit ...    71   6e-11
UniRef100_C1BYC4 DNA-directed RNA polymerases I and III subunit ...    70   8e-11
UniRef100_A7TTT6 Putative uncharacterized protein n=1 Tax=Vander...    70   8e-11
UniRef100_Q5XK67 DNA-directed RNA polymerases I and III subunit ...    70   8e-11
UniRef100_B7P8Y3 RNA polymerase I/III 16Kd polypeptide, putative...    70   1e-10
UniRef100_C5DRN5 ZYRO0B09878p n=1 Tax=Zygosaccharomyces rouxii C...    70   1e-10
UniRef100_UPI00003BD255 hypothetical protein DEHA0A13409g n=1 Ta...    69   2e-10
UniRef100_Q6BY26 DEHA2A12980p n=1 Tax=Debaryomyces hansenii RepI...    69   2e-10
UniRef100_C8V0U1 DNA-directed RNA polymerase I and III 14 kDa po...    69   2e-10
UniRef100_A3LQW8 RNA polymerase I and III subunit n=1 Tax=Pichia...    69   2e-10
UniRef100_UPI0000E4658A PREDICTED: similar to LOC494863 protein ...    69   3e-10
UniRef100_UPI000069FE65 DNA-directed RNA polymerase I subunit D ...    69   3e-10
UniRef100_Q6CIV1 KLLA0F23760p n=1 Tax=Kluyveromyces lactis RepID...    69   3e-10
UniRef100_B6JWF5 DNA-directed RNA polymerase I and III subunit R...    69   3e-10
UniRef100_C0SH10 Predicted protein n=1 Tax=Paracoccidioides bras...    68   4e-10
UniRef100_A5DS75 DNA-directed RNA polymerases I and III 16 kDa p...    68   4e-10
UniRef100_B8MSM4 DNA-directed RNA polymerase I and III 14 kDa po...    68   5e-10
UniRef100_A5DL81 Putative uncharacterized protein n=1 Tax=Pichia...    68   5e-10
UniRef100_UPI0000F2C077 PREDICTED: similar to LOC494863 protein ...    67   7e-10
UniRef100_UPI000151BC99 hypothetical protein PGUG_04032 n=1 Tax=...    67   9e-10
UniRef100_UPI00001CB741 RNA polymerase 1-3 n=1 Tax=Rattus norveg...    67   9e-10
UniRef100_UPI0000610BFE DNA-directed RNA polymerase I subunit D ...    67   9e-10
UniRef100_Q01D46 Trithorax-like (ISS) n=1 Tax=Ostreococcus tauri...    67   9e-10
UniRef100_Q0CH54 Putative uncharacterized protein n=1 Tax=Asperg...    67   1e-09
UniRef100_Q42483 DNA-directed RNA polymerase 14 kDa subunit (AtR...    66   1e-09
UniRef100_B6HGB3 Pc20g11790 protein n=1 Tax=Penicillium chrysoge...    66   1e-09
UniRef100_A1DLU8 DNA-directed RNA polymerase I and III 14 kDa po...    66   2e-09
UniRef100_B3S798 Putative uncharacterized protein (Fragment) n=1...    65   2e-09
UniRef100_B6QVD5 DNA-directed RNA polymerase I and III 14 kDa po...    65   2e-09
UniRef100_Q6DRI4 DNA-directed RNA polymerases I and III subunit ...    65   2e-09
UniRef100_C5JYX4 Predicted protein n=2 Tax=Ajellomyces dermatiti...    65   3e-09
UniRef100_A2R4K1 Contig An15c0040, complete genome n=1 Tax=Asper...    65   3e-09
UniRef100_B5FX73 Putative RNA polymerase I 16 kDa polypeptide n=...    64   6e-09
UniRef100_C0NZW5 DNA-directed RNA polymerase I and III 14 kDa po...    64   7e-09
UniRef100_Q7RYP4 Putative uncharacterized protein n=1 Tax=Neuros...    64   9e-09
UniRef100_C6HHU3 DNA-directed RNA polymerase I and III n=1 Tax=A...    64   9e-09
UniRef100_A8NBI2 Predicted protein n=1 Tax=Coprinopsis cinerea o...    64   9e-09
UniRef100_Q09177 DNA-directed RNA polymerases I and III subunit ...    64   9e-09
UniRef100_A4RTY9 Predicted protein n=1 Tax=Ostreococcus lucimari...    63   1e-08
UniRef100_A6RF11 Predicted protein n=1 Tax=Ajellomyces capsulatu...    63   1e-08
UniRef100_A7SBE9 Predicted protein (Fragment) n=1 Tax=Nematostel...    63   2e-08
UniRef100_Q2H911 Putative uncharacterized protein n=1 Tax=Chaeto...    63   2e-08
UniRef100_C4JP01 Putative uncharacterized protein n=1 Tax=Uncino...    63   2e-08
UniRef100_B8NDQ0 DNA-directed RNA polymerase I and III 14 kDa po...    63   2e-08
UniRef100_A1CM75 DNA-directed RNA polymerase I and III 14 kDa po...    63   2e-08
UniRef100_Q54ES6 DNA-directed RNA polymerases I and III subunit ...    63   2e-08
UniRef100_C5P253 DNA-directed RNA polymerases I and III 16 kDa p...    62   2e-08
UniRef100_Q7PM95 AGAP009644-PA n=1 Tax=Anopheles gambiae RepID=Q...    62   3e-08
UniRef100_UPI000023E4CA hypothetical protein FG06937.1 n=1 Tax=G...    61   6e-08
UniRef100_C1BP53 DNA-directed RNA polymerases I and III subunit ...    61   6e-08
UniRef100_B2VVA3 DNA-directed RNA polymerase I and III 14 kDa po...    61   6e-08
UniRef100_A4R912 Putative uncharacterized protein n=1 Tax=Magnap...    61   6e-08
UniRef100_B6KBV3 DNA-directed RNA polymerases I and III subunit ...    60   1e-07
UniRef100_C9SPR1 DNA-directed RNA polymerases I and III subunit ...    60   1e-07
UniRef100_A6S183 Putative uncharacterized protein n=1 Tax=Botryo...    60   1e-07
UniRef100_Q4PFC9 Putative uncharacterized protein n=1 Tax=Ustila...    59   2e-07
UniRef100_C7YQM9 Predicted protein n=1 Tax=Nectria haematococca ...    59   2e-07
UniRef100_Q16F80 DNA-directed RNA polymerase I 16 kDa polypeptid...    59   2e-07
UniRef100_C1BN59 DNA-directed RNA polymerases I and III subunit ...    59   2e-07
UniRef100_C5FRW4 DNA-directed RNA polymerase I and III 14 kDa po...    59   2e-07
UniRef100_Q1E405 Putative uncharacterized protein n=1 Tax=Coccid...    59   3e-07
UniRef100_C1GXH3 Predicted protein n=1 Tax=Paracoccidioides bras...    58   4e-07
UniRef100_A0DTF6 Chromosome undetermined scaffold_63, whole geno...    57   7e-07
UniRef100_UPI000186F34B DNA-directed RNA polymerase I 16 kD poly...    57   9e-07
UniRef100_A9NN58 Putative uncharacterized protein n=1 Tax=Picea ...    57   9e-07
UniRef100_B0YCZ1 DNA-directed RNA polymerase I and III 14 kDa po...    57   9e-07
UniRef100_B8C8G2 Small RNA polymerase (Fragment) n=1 Tax=Thalass...    57   1e-06
UniRef100_UPI00015B57E8 PREDICTED: similar to ENSANGP00000022241...    56   2e-06
UniRef100_B4JPA4 GH13479 n=1 Tax=Drosophila grimshawi RepID=B4JP...    56   2e-06
UniRef100_B0W1R5 DNA-directed RNA polymerase I subunit D n=1 Tax...    56   2e-06
UniRef100_Q0UFU4 Putative uncharacterized protein n=1 Tax=Phaeos...    55   3e-06
UniRef100_P34476 Probable DNA-directed RNA polymerases I and III...    55   3e-06
UniRef100_Q22RW2 DNA-directed RNA polymerase I subunit D n=1 Tax...    55   3e-06
UniRef100_C5KJH4 Putative uncharacterized protein n=1 Tax=Perkin...    55   3e-06
UniRef100_Q61IX2 Probable DNA-directed RNA polymerases I and III...    55   3e-06
UniRef100_Q29CK4 GA10493 n=2 Tax=pseudoobscura subgroup RepID=Q2...    55   4e-06
UniRef100_B3MNN6 GF15205 n=1 Tax=Drosophila ananassae RepID=B3MN...    55   4e-06
UniRef100_A0E1A2 Chromosome undetermined scaffold_73, whole geno...    55   4e-06
UniRef100_B4KKF8 GI17231 n=1 Tax=Drosophila mojavensis RepID=B4K...    54   6e-06
UniRef100_Q9VIZ0 Probable DNA-directed RNA polymerases I and III...    54   6e-06
UniRef100_B6QVD6 DNA-directed RNA polymerase I and III 14 kDa po...    54   6e-06
UniRef100_B4M941 GJ17990 n=1 Tax=Drosophila virilis RepID=B4M941...    54   7e-06
UniRef100_Q4R9Z3 Chromosome 1 SCAF24822, whole genome shotgun se...    54   1e-05
UniRef100_A8MRK9 Uncharacterized protein At2g29540.3 n=1 Tax=Ara...    54   1e-05
graphical overview:
alignment
UniRef100_A8JHU3 UniRef100_A8JHU3 UniRef100_A7NYN7 UniRef100_A7NYN7 UniRef100_C6T2I2 UniRef100_C6T2I2 UniRef100_C1E3U1 UniRef100_C1E3U1 UniRef100_C5YTE8 UniRef100_C5YTE8 UniRef100_B9GIX0 UniRef100_B9GIX0 UniRef100_C5Y1Q7 UniRef100_C5Y1Q7 UniRef100_C4Y1Z9 UniRef100_C4Y1Z9 UniRef100_UPI000180B7C9 UniRef100_UPI000180B7C9 UniRef100_C1N3U7 UniRef100_C1N3U7 UniRef100_A9SFX7 UniRef100_A9SFX7 UniRef100_Q2QWI0 UniRef100_Q2QWI0 UniRef100_Q6C4D6 UniRef100_Q6C4D6 UniRef100_Q59LT9 UniRef100_Q59LT9 UniRef100_C4YL76 UniRef100_C4YL76 UniRef100_C4R752 UniRef100_C4R752 UniRef100_Q6FLF2 UniRef100_Q6FLF2 UniRef100_UPI0000610BFD UniRef100_UPI0000610BFD UniRef100_Q1RMG8 UniRef100_Q1RMG8 UniRef100_UPI0001924FE8 UniRef100_UPI0001924FE8 UniRef100_UPI000194E32E UniRef100_UPI000194E32E UniRef100_C1BEM0 UniRef100_C1BEM0 UniRef100_UPI00004BE302 UniRef100_UPI00004BE302 UniRef100_C0H7G7 UniRef100_C0H7G7 UniRef100_B5XCF3 UniRef100_B5XCF3 UniRef100_C5M4D1 UniRef100_C5M4D1 UniRef100_UPI00017F079B UniRef100_UPI00017F079B UniRef100_B2BXR4 UniRef100_B2BXR4 UniRef100_Q755Q7 UniRef100_Q755Q7 UniRef100_B9WL57 UniRef100_B9WL57 UniRef100_C3YRU6 UniRef100_C3YRU6 UniRef100_UPI00006D2CA2 UniRef100_UPI00006D2CA2 UniRef100_UPI0000F31A28 UniRef100_UPI0000F31A28 UniRef100_A9NNU7 UniRef100_A9NNU7 UniRef100_C5DGY8 UniRef100_C5DGY8 UniRef100_Q9Y2S0 UniRef100_Q9Y2S0 UniRef100_UPI000155D07A UniRef100_UPI000155D07A UniRef100_P28000 UniRef100_P28000 UniRef100_P97304 UniRef100_P97304 UniRef100_C1BYC4 UniRef100_C1BYC4 UniRef100_A7TTT6 UniRef100_A7TTT6 UniRef100_Q5XK67 UniRef100_Q5XK67 UniRef100_B7P8Y3 UniRef100_B7P8Y3 UniRef100_C5DRN5 UniRef100_C5DRN5 UniRef100_UPI00003BD255 UniRef100_UPI00003BD255 UniRef100_Q6BY26 UniRef100_Q6BY26 UniRef100_C8V0U1 UniRef100_C8V0U1 UniRef100_A3LQW8 UniRef100_A3LQW8 UniRef100_UPI0000E4658A UniRef100_UPI0000E4658A UniRef100_UPI000069FE65 UniRef100_UPI000069FE65 UniRef100_Q6CIV1 UniRef100_Q6CIV1 UniRef100_B6JWF5 UniRef100_B6JWF5 UniRef100_C0SH10 UniRef100_C0SH10 UniRef100_A5DS75 UniRef100_A5DS75 UniRef100_B8MSM4 UniRef100_B8MSM4 UniRef100_A5DL81 UniRef100_A5DL81 UniRef100_UPI0000F2C077 UniRef100_UPI0000F2C077 UniRef100_UPI000151BC99 UniRef100_UPI000151BC99 UniRef100_UPI00001CB741 UniRef100_UPI00001CB741 UniRef100_UPI0000610BFE UniRef100_UPI0000610BFE UniRef100_Q01D46 UniRef100_Q01D46 UniRef100_Q0CH54 UniRef100_Q0CH54 UniRef100_Q42483 UniRef100_Q42483 UniRef100_B6HGB3 UniRef100_B6HGB3 UniRef100_A1DLU8 UniRef100_A1DLU8 UniRef100_B3S798 UniRef100_B3S798 UniRef100_B6QVD5 UniRef100_B6QVD5 UniRef100_Q6DRI4 UniRef100_Q6DRI4 UniRef100_C5JYX4 UniRef100_C5JYX4 UniRef100_A2R4K1 UniRef100_A2R4K1 UniRef100_B5FX73 UniRef100_B5FX73 UniRef100_C0NZW5 UniRef100_C0NZW5 UniRef100_Q7RYP4 UniRef100_Q7RYP4 UniRef100_C6HHU3 UniRef100_C6HHU3 UniRef100_A8NBI2 UniRef100_A8NBI2 UniRef100_Q09177 UniRef100_Q09177 UniRef100_A4RTY9 UniRef100_A4RTY9 UniRef100_A6RF11 UniRef100_A6RF11 UniRef100_A7SBE9 UniRef100_A7SBE9 UniRef100_Q2H911 UniRef100_Q2H911 UniRef100_C4JP01 UniRef100_C4JP01 UniRef100_B8NDQ0 UniRef100_B8NDQ0 UniRef100_A1CM75 UniRef100_A1CM75 UniRef100_Q54ES6 UniRef100_Q54ES6 UniRef100_C5P253 UniRef100_C5P253 UniRef100_Q7PM95 UniRef100_Q7PM95 UniRef100_UPI000023E4CA UniRef100_UPI000023E4CA UniRef100_C1BP53 UniRef100_C1BP53 UniRef100_B2VVA3 UniRef100_B2VVA3 UniRef100_A4R912 UniRef100_A4R912 UniRef100_B6KBV3 UniRef100_B6KBV3 UniRef100_C9SPR1 UniRef100_C9SPR1 UniRef100_A6S183 UniRef100_A6S183 UniRef100_Q4PFC9 UniRef100_Q4PFC9 UniRef100_C7YQM9 UniRef100_C7YQM9 UniRef100_Q16F80 UniRef100_Q16F80 UniRef100_C1BN59 UniRef100_C1BN59 UniRef100_C5FRW4 UniRef100_C5FRW4 UniRef100_Q1E405 UniRef100_Q1E405 UniRef100_C1GXH3 UniRef100_C1GXH3 UniRef100_A0DTF6 UniRef100_A0DTF6 UniRef100_UPI000186F34B UniRef100_UPI000186F34B UniRef100_A9NN58 UniRef100_A9NN58 UniRef100_B0YCZ1 UniRef100_B0YCZ1 UniRef100_B8C8G2 UniRef100_B8C8G2 UniRef100_UPI00015B57E8 UniRef100_UPI00015B57E8 UniRef100_B4JPA4 UniRef100_B4JPA4 UniRef100_B0W1R5 UniRef100_B0W1R5 UniRef100_Q0UFU4 UniRef100_Q0UFU4 UniRef100_P34476 UniRef100_P34476 UniRef100_Q22RW2 UniRef100_Q22RW2 UniRef100_C5KJH4 UniRef100_C5KJH4 UniRef100_Q61IX2 UniRef100_Q61IX2 UniRef100_Q29CK4 UniRef100_Q29CK4 UniRef100_B3MNN6 UniRef100_B3MNN6 UniRef100_A0E1A2 UniRef100_A0E1A2 UniRef100_B4KKF8 UniRef100_B4KKF8 UniRef100_Q9VIZ0 UniRef100_Q9VIZ0 UniRef100_B6QVD6 UniRef100_B6QVD6 UniRef100_B4M941 UniRef100_B4M941 UniRef100_Q4R9Z3 UniRef100_Q4R9Z3