AV387363 ( CM014a02_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV387363  CM014a02_r
         (187 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q93WL4 Light-harvesting chlorophyll-a/b binding protei...   122   1e-26
UniRef100_Q1WLW0 Chloroplast light-harvesting chlorophyll-a/b bi...   120   4e-26
UniRef100_A8J287 Chloropyll a-b binding protein of LHCII type I,...    96   2e-18
UniRef100_P14273 Chlorophyll a-b binding protein of LHCII type I...    96   2e-18
UniRef100_Q9ZSJ5 Light harvesting complex II protein n=1 Tax=Chl...    94   4e-18
UniRef100_A8J270 Chlorophyll a-b binding protein of LHCII n=1 Ta...    94   4e-18
UniRef100_A8J264 Chloropyll a-b binding protein of LHCII n=1 Tax...    94   4e-18
UniRef100_Q8S3T8 Major light-harvesting complex II protein m7 n=...    94   5e-18
UniRef100_Q8S3T9 Chlorophyll a-b binding protein of LHCII n=1 Ta...    92   2e-17
UniRef100_A2SY47 Light-harvesting chlorophyll-a/b binding protei...    91   4e-17
UniRef100_A2SY48 Light-harvesting chlorophyll-a/b binding protei...    82   1e-14
UniRef100_A2SY36 Light-harvesting chlorophyll-a/b binding protei...    72   3e-11
UniRef100_P22686 Chlorophyll a-b binding protein of LHCII type I...    68   3e-10
UniRef100_A2SY35 Light-harvesting chlorophyll-a/b binding protei...    63   9e-09
UniRef100_A4QPL1 Chloroplast light-harvesting complex II protein...    63   1e-08
UniRef100_Q6LAL2 Chlorophyll a/b-binding protein (Fragment) n=1 ...    62   3e-08
UniRef100_P07369 Chlorophyll a-b binding protein 3C, chloroplast...    61   5e-08
UniRef100_Q8RVY6 Chlorophyll a/b binding protein (Fragment) n=1 ...    60   6e-08
UniRef100_Q2XTE0 Chlorophyll a-b binding protein 3C-like n=1 Tax...    60   8e-08
UniRef100_Q41447 Chlorophyll a/b-binding protein PS II-Type I n=...    59   1e-07
UniRef100_P27492 Chlorophyll a-b binding protein 16, chloroplast...    59   1e-07
UniRef100_O64446 Light harvesting chlorophyll a/b-binding protei...    59   2e-07
UniRef100_P12469 Chlorophyll a-b binding protein C, chloroplasti...    59   2e-07
UniRef100_P04780 Chlorophyll a-b binding protein 22L, chloroplas...    59   2e-07
UniRef100_Q9ZSV2 Chlorophyll a/b binding protein n=1 Tax=Acetabu...    58   3e-07
UniRef100_O64447 Light harvesting chlorophyll a/b-binding protei...    58   3e-07
UniRef100_P12470 Chlorophyll a-b binding protein E, chloroplasti...    58   3e-07
UniRef100_A4QPK6 Chloroplast light-harvesting complex II protein...    58   4e-07
UniRef100_P04781 Chlorophyll a-b binding protein 22R, chloroplas...    58   4e-07
UniRef100_O64450 Light harvesting chlorophyll a/b-binding protei...    57   5e-07
UniRef100_P04782 Chlorophyll a-b binding protein 25, chloroplast...    57   7e-07
UniRef100_A4QPI3 Chloroplast light-harvesting complex II protein...    57   9e-07
UniRef100_P27496 Chlorophyll a-b binding protein 50, chloroplast...    57   9e-07
UniRef100_P04779 Chlorophyll a-b binding protein 13, chloroplast...    57   9e-07
UniRef100_Q9XFU7 Putative uncharacterized protein (Fragment) n=1...    56   1e-06
UniRef100_O64448 Light harvesting chlorophyll a/b-binding protei...    55   2e-06
UniRef100_O22496 Chlorophyll a/b binding protein n=1 Tax=Tetrase...    55   2e-06
UniRef100_P04783 Chlorophyll a-b binding protein 91R, chloroplas...    55   2e-06
UniRef100_C4P6Y3 Chloroplast light-harvesting chlorophyll-a/b bi...    55   3e-06
UniRef100_Q50K58 CAB homologue1 (Fragment) n=1 Tax=Lemna paucico...    54   4e-06
UniRef100_A8HPF9 Chloroplast light-harvesting complex II protein...    54   4e-06
UniRef100_Q40185 Light-harvesting chlorophyll a/b protein n=1 Ta...    54   6e-06
UniRef100_O64449 Light harvesting chlorophyll a/b-binding protei...    54   6e-06
UniRef100_B1PL33 Chloroplast chlorophyll A/B-binding protein (Fr...    54   6e-06
UniRef100_A1XKU7 Major light-harvesting chlorophyll a/b protein ...    54   6e-06
UniRef100_A1XKU6 Major light-harvesting chlorophyll a/b protein ...    54   6e-06
UniRef100_P27517 Chlorophyll a-b binding protein of LHCII type I...    54   6e-06
UniRef100_P27491 Chlorophyll a-b binding protein 7, chloroplasti...    54   6e-06
UniRef100_P27495 Chlorophyll a-b binding protein 40, chloroplast...    54   6e-06
UniRef100_Q40247 Light-harvesting chlorophyll a/b-binding protei...    54   7e-06
UniRef100_A4QPK8 Chloroplast light-harvesting complex II protein...    54   7e-06
graphical overview:
alignment
UniRef100_Q93WL4 UniRef100_Q93WL4 UniRef100_Q1WLW0 UniRef100_Q1WLW0 UniRef100_A8J287 UniRef100_A8J287 UniRef100_P14273 UniRef100_P14273 UniRef100_Q9ZSJ5 UniRef100_Q9ZSJ5 UniRef100_A8J270 UniRef100_A8J270 UniRef100_A8J264 UniRef100_A8J264 UniRef100_Q8S3T8 UniRef100_Q8S3T8 UniRef100_Q8S3T9 UniRef100_Q8S3T9 UniRef100_A2SY47 UniRef100_A2SY47 UniRef100_A2SY48 UniRef100_A2SY48 UniRef100_A2SY36 UniRef100_A2SY36 UniRef100_P22686 UniRef100_P22686 UniRef100_A2SY35 UniRef100_A2SY35 UniRef100_A4QPL1 UniRef100_A4QPL1 UniRef100_Q6LAL2 UniRef100_Q6LAL2 UniRef100_P07369 UniRef100_P07369 UniRef100_Q8RVY6 UniRef100_Q8RVY6 UniRef100_Q2XTE0 UniRef100_Q2XTE0 UniRef100_Q41447 UniRef100_Q41447 UniRef100_P27492 UniRef100_P27492 UniRef100_O64446 UniRef100_O64446 UniRef100_P12469 UniRef100_P12469 UniRef100_P04780 UniRef100_P04780 UniRef100_Q9ZSV2 UniRef100_Q9ZSV2 UniRef100_O64447 UniRef100_O64447 UniRef100_P12470 UniRef100_P12470 UniRef100_A4QPK6 UniRef100_A4QPK6 UniRef100_P04781 UniRef100_P04781 UniRef100_O64450 UniRef100_O64450 UniRef100_P04782 UniRef100_P04782 UniRef100_A4QPI3 UniRef100_A4QPI3 UniRef100_A4QPI3 UniRef100_A4QPI3 UniRef100_A4QPI3 UniRef100_A4QPI3 UniRef100_P27496 UniRef100_P27496 UniRef100_P04779 UniRef100_P04779 UniRef100_Q9XFU7 UniRef100_Q9XFU7 UniRef100_O64448 UniRef100_O64448 UniRef100_O22496 UniRef100_O22496 UniRef100_P04783 UniRef100_P04783 UniRef100_C4P6Y3 UniRef100_C4P6Y3 UniRef100_Q50K58 UniRef100_Q50K58 UniRef100_A8HPF9 UniRef100_A8HPF9 UniRef100_A8HPF9 UniRef100_A8HPF9 UniRef100_Q40185 UniRef100_Q40185 UniRef100_O64449 UniRef100_O64449 UniRef100_B1PL33 UniRef100_B1PL33 UniRef100_A1XKU7 UniRef100_A1XKU7 UniRef100_A1XKU6 UniRef100_A1XKU6 UniRef100_P27517 UniRef100_P27517 UniRef100_P27491 UniRef100_P27491 UniRef100_P27495 UniRef100_P27495 UniRef100_Q40247 UniRef100_Q40247