AV555730 ( SQ024a03F )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV555730  SQ024a03F
         (492 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q39194 Photosystem II reaction center W protein, chlor...   239   9e-62
UniRef100_A1YMY4 Component of 6.1 kDa polypeptide of photosystem...   223   5e-57
UniRef100_Q41908 Photosystem II 7kD protein n=1 Tax=Arabidopsis ...   220   3e-56
UniRef100_C6SWM3 Putative uncharacterized protein n=1 Tax=Glycin...   154   4e-36
UniRef100_C6SYI0 Putative uncharacterized protein n=1 Tax=Glycin...   151   2e-35
UniRef100_C6T2W3 Putative uncharacterized protein n=1 Tax=Glycin...   150   3e-35
UniRef100_C6SWZ8 Putative uncharacterized protein n=1 Tax=Glycin...   149   9e-35
UniRef100_A7PUM2 Chromosome chr7 scaffold_31, whole genome shotg...   142   1e-32
UniRef100_Q41387 Photosystem II reaction center W protein, chlor...   140   3e-32
UniRef100_A7QVP6 Chromosome chr14 scaffold_190, whole genome sho...   140   4e-32
UniRef100_A9PEP9 Putative uncharacterized protein n=1 Tax=Populu...   139   1e-31
UniRef100_Q8W536 Photosystem II reaction center (Fragment) n=1 T...   137   3e-31
UniRef100_B9GS65 Putative uncharacterized protein n=1 Tax=Populu...   133   5e-30
UniRef100_B7FHC2 Putative uncharacterized protein n=1 Tax=Medica...   132   9e-30
UniRef100_A9PJA9 Putative uncharacterized protein n=1 Tax=Populu...   132   2e-29
UniRef100_B9S4T1 Photosystem II reaction center W protein, chlor...   131   3e-29
UniRef100_B9SZ65 Photosystem II reaction center W protein, chlor...   125   1e-27
UniRef100_C5XLL1 Putative uncharacterized protein Sb03g036090 n=...   125   1e-27
UniRef100_B4FUI4 Photosystem II reaction center W protein n=1 Ta...   122   2e-26
UniRef100_B6TM37 Photosystem II reaction center W protein n=1 Ta...   121   3e-26
UniRef100_B6T2W4 Photosystem II reaction center W protein n=1 Ta...   119   1e-25
UniRef100_B6SMK2 Photosystem II reaction center W protein n=1 Ta...   119   1e-25
UniRef100_Q5ZBY9 Photosystem II reaction center W protein, chlor...   116   9e-25
UniRef100_A5C3A9 Putative uncharacterized protein n=1 Tax=Vitis ...   115   2e-24
UniRef100_B9ET99 Putative uncharacterized protein n=1 Tax=Oryza ...   107   3e-22
UniRef100_B6TMB3 Photosystem II reaction center W protein n=1 Ta...   106   7e-22
UniRef100_A9NL01 Putative uncharacterized protein n=1 Tax=Picea ...    95   3e-18
UniRef100_A9NLC2 Putative uncharacterized protein n=1 Tax=Picea ...    94   4e-18
UniRef100_C0PQQ7 Putative uncharacterized protein n=1 Tax=Picea ...    93   1e-17
UniRef100_A9SEQ6 Predicted protein (Fragment) n=1 Tax=Physcomitr...    93   1e-17
UniRef100_Q9AXN8 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitr...    78   3e-13
UniRef100_Q9AXP0 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitr...    77   5e-13
UniRef100_Q9AXN9 PSII subunit PsbW (Fragment) n=2 Tax=Physcomitr...    76   1e-12
UniRef100_A9SEQ5 Predicted protein n=1 Tax=Physcomitrella patens...    74   5e-12
UniRef100_A2SY30 Photosystem II reaction center W protein n=1 Ta...    69   1e-10
UniRef100_Q9SPI9 Photosystem II reaction center W protein, chlor...    69   1e-10
UniRef100_B5A4J5 Photosystem II reaction center W protein n=1 Ta...    58   4e-07
UniRef100_Q7XYI4 Photosystem II protein PsbW n=1 Tax=Bigelowiell...    56   1e-06
graphical overview:
alignment
UniRef100_Q39194 UniRef100_Q39194 UniRef100_A1YMY4 UniRef100_A1YMY4 UniRef100_Q41908 UniRef100_Q41908 UniRef100_C6SWM3 UniRef100_C6SWM3 UniRef100_C6SYI0 UniRef100_C6SYI0 UniRef100_C6T2W3 UniRef100_C6T2W3 UniRef100_C6SWZ8 UniRef100_C6SWZ8 UniRef100_A7PUM2 UniRef100_A7PUM2 UniRef100_Q41387 UniRef100_Q41387 UniRef100_A7QVP6 UniRef100_A7QVP6 UniRef100_A9PEP9 UniRef100_A9PEP9 UniRef100_Q8W536 UniRef100_Q8W536 UniRef100_B9GS65 UniRef100_B9GS65 UniRef100_B7FHC2 UniRef100_B7FHC2 UniRef100_A9PJA9 UniRef100_A9PJA9 UniRef100_B9S4T1 UniRef100_B9S4T1 UniRef100_B9SZ65 UniRef100_B9SZ65 UniRef100_C5XLL1 UniRef100_C5XLL1 UniRef100_B4FUI4 UniRef100_B4FUI4 UniRef100_B6TM37 UniRef100_B6TM37 UniRef100_B6T2W4 UniRef100_B6T2W4 UniRef100_B6SMK2 UniRef100_B6SMK2 UniRef100_Q5ZBY9 UniRef100_Q5ZBY9 UniRef100_A5C3A9 UniRef100_A5C3A9 UniRef100_B9ET99 UniRef100_B9ET99 UniRef100_B6TMB3 UniRef100_B6TMB3 UniRef100_A9NL01 UniRef100_A9NL01 UniRef100_A9NLC2 UniRef100_A9NLC2 UniRef100_C0PQQ7 UniRef100_C0PQQ7 UniRef100_A9SEQ6 UniRef100_A9SEQ6 UniRef100_Q9AXN8 UniRef100_Q9AXN8 UniRef100_Q9AXP0 UniRef100_Q9AXP0 UniRef100_Q9AXN9 UniRef100_Q9AXN9 UniRef100_A9SEQ5 UniRef100_A9SEQ5 UniRef100_A2SY30 UniRef100_A2SY30 UniRef100_Q9SPI9 UniRef100_Q9SPI9 UniRef100_B5A4J5 UniRef100_B5A4J5