AV542836 ( RZ190e04F )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV542836  RZ190e04F
         (250 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_O23212 Splicing factor U2af large subunit A n=1 Tax=Ar...    94   5e-18
UniRef100_Q9C6C1 U2 snRNP auxiliary factor, large subunit, putat...    81   3e-14
UniRef100_Q8L716 Splicing factor U2af large subunit B n=1 Tax=Ar...    81   3e-14
UniRef100_Q9ZR39 Splicing factor U2af large subunit A n=1 Tax=Ni...    78   3e-13
UniRef100_UPI0001760174 PREDICTED: similar to Splicing factor U2...    76   1e-12
UniRef100_B9HEU4 Predicted protein n=1 Tax=Populus trichocarpa R...    76   1e-12
UniRef100_B9MXR1 Predicted protein n=1 Tax=Populus trichocarpa R...    75   2e-12
UniRef100_Q9FYW5 BAC19.11 n=1 Tax=Solanum lycopersicum RepID=Q9F...    75   2e-12
UniRef100_C0IXK1 U2 snRNP auxiliary factor large subunit n=2 Tax...    75   2e-12
UniRef100_A9XLE6 Putative uncharacterized protein n=1 Tax=Capsic...    74   4e-12
UniRef100_A9XLG6 Putative uncharacterized protein n=1 Tax=Solanu...    74   5e-12
UniRef100_A9XLF0 Putative uncharacterized protein n=1 Tax=Petuni...    74   5e-12
UniRef100_A9XLF1 Putative uncharacterized protein n=1 Tax=Petuni...    72   2e-11
UniRef100_UPI0001983175 PREDICTED: hypothetical protein n=1 Tax=...    71   3e-11
UniRef100_A7PUY1 Chromosome chr4 scaffold_32, whole genome shotg...    71   3e-11
UniRef100_Q9ZR40 Splicing factor U2af large subunit B n=1 Tax=Ni...    71   3e-11
UniRef100_A5BUJ8 Putative uncharacterized protein n=1 Tax=Vitis ...    70   6e-11
UniRef100_UPI000198633E PREDICTED: hypothetical protein n=1 Tax=...    67   5e-10
UniRef100_C0P852 Putative uncharacterized protein n=1 Tax=Zea ma...    67   5e-10
UniRef100_B6UDT4 Splicing factor U2AF 65 kDa subunit n=1 Tax=Zea...    67   5e-10
UniRef100_B4FR45 Putative uncharacterized protein n=1 Tax=Zea ma...    67   5e-10
UniRef100_A7QYN5 Chromosome undetermined scaffold_252, whole gen...    67   5e-10
UniRef100_Q2QKB4 Splicing factor U2af large subunit B n=1 Tax=Tr...    67   6e-10
UniRef100_UPI0000DD9D2A Os11g0682300 n=1 Tax=Oryza sativa Japoni...    65   2e-09
UniRef100_Q2QZL4 Splicing factor U2af large subunit B n=2 Tax=Or...    65   2e-09
UniRef100_B8AJ67 Putative uncharacterized protein n=1 Tax=Oryza ...    65   2e-09
UniRef100_C3SA99 U2AF large subunit n=1 Tax=Brachypodium distach...    64   4e-09
UniRef100_Q2R0Q1 Splicing factor U2af large subunit A n=2 Tax=Or...    63   1e-08
UniRef100_B8BLH5 Putative uncharacterized protein n=1 Tax=Oryza ...    62   2e-08
UniRef100_A9SHD2 Predicted protein (Fragment) n=1 Tax=Physcomitr...    62   2e-08
UniRef100_C5Y7Z5 Putative uncharacterized protein Sb05g026740 n=...    62   2e-08
UniRef100_B9N3D4 Predicted protein n=1 Tax=Populus trichocarpa R...    62   2e-08
UniRef100_B4FD21 Putative uncharacterized protein n=1 Tax=Zea ma...    62   2e-08
UniRef100_B9H2X3 Predicted protein n=1 Tax=Populus trichocarpa R...    61   3e-08
UniRef100_A9SKG9 Predicted protein (Fragment) n=1 Tax=Physcomitr...    59   2e-07
UniRef100_A9S9L1 Predicted protein (Fragment) n=1 Tax=Physcomitr...    57   8e-07
UniRef100_A9SNH7 Predicted protein (Fragment) n=1 Tax=Physcomitr...    54   5e-06
UniRef100_A9TN58 Predicted protein n=1 Tax=Physcomitrella patens...    54   7e-06
graphical overview:
alignment
UniRef100_O23212 UniRef100_O23212 UniRef100_Q9C6C1 UniRef100_Q9C6C1 UniRef100_Q8L716 UniRef100_Q8L716 UniRef100_Q9ZR39 UniRef100_Q9ZR39 UniRef100_UPI0001760174 UniRef100_UPI0001760174 UniRef100_B9HEU4 UniRef100_B9HEU4 UniRef100_B9MXR1 UniRef100_B9MXR1 UniRef100_Q9FYW5 UniRef100_Q9FYW5 UniRef100_C0IXK1 UniRef100_C0IXK1 UniRef100_A9XLE6 UniRef100_A9XLE6 UniRef100_A9XLG6 UniRef100_A9XLG6 UniRef100_A9XLF0 UniRef100_A9XLF0 UniRef100_A9XLF1 UniRef100_A9XLF1 UniRef100_UPI0001983175 UniRef100_UPI0001983175 UniRef100_A7PUY1 UniRef100_A7PUY1 UniRef100_Q9ZR40 UniRef100_Q9ZR40 UniRef100_A5BUJ8 UniRef100_A5BUJ8 UniRef100_UPI000198633E UniRef100_UPI000198633E UniRef100_C0P852 UniRef100_C0P852 UniRef100_B6UDT4 UniRef100_B6UDT4 UniRef100_B4FR45 UniRef100_B4FR45 UniRef100_A7QYN5 UniRef100_A7QYN5 UniRef100_Q2QKB4 UniRef100_Q2QKB4 UniRef100_UPI0000DD9D2A UniRef100_UPI0000DD9D2A UniRef100_Q2QZL4 UniRef100_Q2QZL4 UniRef100_B8AJ67 UniRef100_B8AJ67 UniRef100_C3SA99 UniRef100_C3SA99 UniRef100_Q2R0Q1 UniRef100_Q2R0Q1 UniRef100_B8BLH5 UniRef100_B8BLH5 UniRef100_A9SHD2 UniRef100_A9SHD2 UniRef100_C5Y7Z5 UniRef100_C5Y7Z5 UniRef100_B9N3D4 UniRef100_B9N3D4 UniRef100_B4FD21 UniRef100_B4FD21 UniRef100_B9H2X3 UniRef100_B9H2X3 UniRef100_A9SKG9 UniRef100_A9SKG9 UniRef100_A9S9L1 UniRef100_A9S9L1 UniRef100_A9SNH7 UniRef100_A9SNH7