[UP]
BLASTX 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AV541767 RZ171a04F
(556 letters)
Database: uniref100
9,526,577 sequences; 3,332,566,763 total letters
Searching..................................................done
significant alignments:[graphical|details]
UniRef100_Q9S7E6 Putative small nuclear ribonucleoprotein Sm D3;... 184 3e-45
UniRef100_B9GQ12 Predicted protein n=1 Tax=Populus trichocarpa R... 148 2e-34
UniRef100_B9H5H6 Predicted protein n=1 Tax=Populus trichocarpa R... 145 2e-33
UniRef100_UPI000198513C PREDICTED: hypothetical protein n=1 Tax=... 144 3e-33
UniRef100_B9R8N0 Small nuclear ribonucleoprotein, putative n=1 T... 144 4e-33
UniRef100_Q9LM92 F2D10.7 n=1 Tax=Arabidopsis thaliana RepID=Q9LM... 143 8e-33
UniRef100_Q8LC48 Small nuclear ribonucleoprotein, putative n=1 T... 141 3e-32
UniRef100_C6SWW8 Putative uncharacterized protein n=1 Tax=Glycin... 140 8e-32
UniRef100_A7QPB5 Chromosome chr18 scaffold_137, whole genome sho... 139 2e-31
UniRef100_UPI0001982F13 PREDICTED: hypothetical protein n=1 Tax=... 138 2e-31
UniRef100_B4FKA5 Putative uncharacterized protein n=1 Tax=Zea ma... 135 2e-30
UniRef100_C5WRK4 Putative uncharacterized protein Sb01g041430 n=... 135 2e-30
UniRef100_B6UG34 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Z... 135 2e-30
UniRef100_B6UGP6 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Z... 134 4e-30
UniRef100_B4FNH4 Putative uncharacterized protein n=1 Tax=Zea ma... 134 4e-30
UniRef100_Q10PA9 Os03g0240800 protein n=1 Tax=Oryza sativa Japon... 134 6e-30
UniRef100_Q6YU78 Os02g0102700 protein n=2 Tax=Oryza sativa RepID... 134 6e-30
UniRef100_UPI0001983856 PREDICTED: hypothetical protein n=1 Tax=... 130 7e-29
UniRef100_A5ALZ4 Putative uncharacterized protein n=1 Tax=Vitis ... 130 7e-29
UniRef100_A9NMM7 Putative uncharacterized protein n=1 Tax=Picea ... 130 9e-29
UniRef100_A3AFY2 Putative uncharacterized protein n=2 Tax=Oryza ... 128 3e-28
UniRef100_B8LQI0 Putative uncharacterized protein n=1 Tax=Picea ... 128 3e-28
UniRef100_A9RWN4 Predicted protein n=1 Tax=Physcomitrella patens... 127 7e-28
UniRef100_A7PSI3 Chromosome chr6 scaffold_28, whole genome shotg... 125 3e-27
UniRef100_Q9LMW6 F5M15.9 n=1 Tax=Arabidopsis thaliana RepID=Q9LM... 122 2e-26
UniRef100_B6UDW2 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Z... 121 3e-26
UniRef100_C0PDC0 Putative uncharacterized protein n=1 Tax=Zea ma... 119 2e-25
UniRef100_A5C078 Putative uncharacterized protein n=1 Tax=Vitis ... 114 6e-24
UniRef100_A8STG5 Small nuclear ribonucleoprotein (Fragment) n=1 ... 103 1e-20
UniRef100_Q7ZVB5 Small nuclear ribonucleoprotein D3 polypeptide,... 102 2e-20
UniRef100_C1FG12 Predicted protein n=1 Tax=Micromonas sp. RCC299... 101 4e-20
UniRef100_A8I0E2 Small nuclear ribonucleoprotein n=1 Tax=Chlamyd... 100 7e-20
UniRef100_A7RM92 Predicted protein n=1 Tax=Nematostella vectensi... 100 7e-20
UniRef100_B5XBB1 Small nuclear ribonucleoprotein Sm D3 n=2 Tax=S... 100 1e-19
UniRef100_B5X939 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=S... 100 1e-19
UniRef100_B5X7Z0 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=S... 100 1e-19
UniRef100_C1MJN3 Predicted protein n=1 Tax=Micromonas pusilla CC... 100 1e-19
UniRef100_UPI00015B5B9F PREDICTED: similar to MGC52856 protein n... 99 2e-19
UniRef100_UPI0001927408 PREDICTED: similar to Small nuclear ribo... 99 3e-19
UniRef100_C1BJM5 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=O... 99 3e-19
UniRef100_Q8AVZ5 MGC52856 protein n=1 Tax=Xenopus laevis RepID=Q... 98 4e-19
UniRef100_P62318 Small nuclear ribonucleoprotein Sm D3 n=7 Tax=T... 98 4e-19
UniRef100_C1BY76 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=E... 98 5e-19
UniRef100_B5X738 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=S... 98 5e-19
UniRef100_B0V1I0 Small nuclear ribonucleoprotein D3 polypeptide ... 98 5e-19
UniRef100_B4LNH9 GJ19907 n=1 Tax=Drosophila virilis RepID=B4LNH9... 97 6e-19
UniRef100_B4J4M9 GH19718 n=2 Tax=Drosophila RepID=B4J4M9_DROGR 97 6e-19
UniRef100_Q6IQ56 Small nuclear ribonucleoprotein D3 polypeptide ... 97 8e-19
UniRef100_Q4T029 Chromosome undetermined SCAF11373, whole genome... 97 8e-19
UniRef100_UPI00004C19BB PREDICTED: similar to small nuclear ribo... 97 1e-18
UniRef100_Q91VM2 Small nuclear ribonucleoprotein D3 n=1 Tax=Mus ... 96 1e-18
UniRef100_B4NMW9 GK23009 n=1 Tax=Drosophila willistoni RepID=B4N... 96 1e-18
UniRef100_B5E133 GA24604 n=2 Tax=pseudoobscura subgroup RepID=B5... 96 1e-18
UniRef100_B3MH21 GF12297 n=1 Tax=Drosophila ananassae RepID=B3MH... 96 1e-18
UniRef100_O44437 Small nuclear ribonucleoprotein Sm D3 n=5 Tax=m... 96 1e-18
UniRef100_UPI0000DB7292 PREDICTED: similar to small nuclear ribo... 95 4e-18
UniRef100_C3XQV0 Putative uncharacterized protein n=1 Tax=Branch... 95 4e-18
UniRef100_C9JQC3 Putative uncharacterized protein SNRPD3 n=1 Tax... 95 4e-18
UniRef100_UPI000186DCC7 Small nuclear ribonucleoprotein SM D3, p... 94 5e-18
UniRef100_Q7Q0C0 AGAP012380-PA n=1 Tax=Anopheles gambiae RepID=Q... 94 7e-18
UniRef100_A8NMU3 Small nuclear ribonucleoprotein Sm D3, putative... 93 2e-17
UniRef100_UPI0000D56456 PREDICTED: similar to AGAP012380-PA n=1 ... 92 3e-17
UniRef100_Q2KIS8 Small nuclear ribonucleoprotein D3 polypeptide ... 92 3e-17
UniRef100_Q16Q31 Small nuclear ribonucleoprotein sm d3 n=1 Tax=A... 91 4e-17
UniRef100_B7Q5H5 Small nuclear ribonucleoprotein Sm D3, putative... 91 4e-17
UniRef100_B5X5P3 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=S... 91 8e-17
UniRef100_B0WEA6 Small nuclear ribonucleoprotein SM D3 n=1 Tax=C... 91 8e-17
UniRef100_B4DJP7 cDNA FLJ51872, highly similar to Small nuclear ... 91 8e-17
UniRef100_B2B6V4 Predicted CDS Pa_2_9040 n=1 Tax=Podospora anser... 91 8e-17
UniRef100_B0CS79 Predicted protein n=1 Tax=Laccaria bicolor S238... 91 8e-17
UniRef100_Q86L45 LSM domain-containing protein n=1 Tax=Dictyoste... 90 1e-16
UniRef100_C4WUG2 ACYPI009639 protein n=1 Tax=Acyrthosiphon pisum... 90 1e-16
UniRef100_B2W6T3 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=P... 90 1e-16
UniRef100_C1BVQ5 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=L... 90 1e-16
UniRef100_Q9C2A8 Probable small nuclear ribonucleoprotein SM D3 ... 90 1e-16
UniRef100_Q2HBC2 Putative uncharacterized protein n=1 Tax=Chaeto... 90 1e-16
UniRef100_A4R510 Putative uncharacterized protein n=1 Tax=Magnap... 89 2e-16
UniRef100_A6SEY6 Putative uncharacterized protein n=1 Tax=Botryo... 89 2e-16
UniRef100_UPI000023D237 hypothetical protein FG05965.1 n=1 Tax=G... 89 3e-16
UniRef100_C7YUP2 Putative uncharacterized protein n=1 Tax=Nectri... 89 3e-16
UniRef100_UPI000179DC31 hypothetical protein LOC617823 n=1 Tax=B... 88 4e-16
UniRef100_Q0UDD6 Putative uncharacterized protein n=1 Tax=Phaeos... 88 4e-16
UniRef100_A9RJD3 Predicted protein n=1 Tax=Physcomitrella patens... 87 1e-15
UniRef100_A8WN24 C. briggsae CBR-SNR-1 protein n=1 Tax=Caenorhab... 86 2e-15
UniRef100_C1G4Y3 Small nuclear ribonucleoprotein Sm D3 n=3 Tax=P... 86 2e-15
UniRef100_C0NY06 Small nuclear ribonucleoprotein Sm D3 n=3 Tax=A... 86 2e-15
UniRef100_C4JQH1 Small nuclear ribonucleoprotein SM D3 n=3 Tax=O... 85 3e-15
UniRef100_Q0D029 Small nuclear ribonucleoprotein Sm D3 n=3 Tax=A... 85 3e-15
UniRef100_A8N5H9 Putative uncharacterized protein n=1 Tax=Coprin... 85 3e-15
UniRef100_A9V0R2 Predicted protein n=1 Tax=Monosiga brevicollis ... 85 4e-15
UniRef100_C8VLD5 Small nuclear ribonucleoprotein SmD3, putative ... 85 4e-15
UniRef100_C5FR86 Small nuclear ribonucleoprotein SM D3 n=1 Tax=M... 84 5e-15
UniRef100_B6QI77 Small nuclear ribonucleoprotein SmD3, putative ... 84 7e-15
UniRef100_B6QI76 Small nuclear ribonucleoprotein SmD3, putative ... 84 7e-15
UniRef100_A2QJD5 Complex: the major small nuclear ribonucleoprot... 84 7e-15
UniRef100_Q17348 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=C... 84 7e-15
UniRef100_B6HRX7 Pc22g12590 protein n=1 Tax=Penicillium chrysoge... 83 1e-14
UniRef100_B6KA43 Small nuclear ribonucleoprotein, putative n=3 T... 82 2e-14
UniRef100_C9SNY3 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=V... 82 3e-14
UniRef100_UPI000180D201 PREDICTED: similar to Small nuclear ribo... 82 4e-14
UniRef100_B6K0A8 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=S... 82 4e-14
UniRef100_Q16KQ1 Putative uncharacterized protein n=1 Tax=Aedes ... 80 1e-13
UniRef100_Q4JHT3 Small nuclear ribonucleoprotein SM-D3, putative... 79 2e-13
UniRef100_A4RTS7 Predicted protein (Fragment) n=1 Tax=Ostreococc... 79 3e-13
UniRef100_Q5DCE2 SJCHGC04758 protein (Fragment) n=1 Tax=Schistos... 79 3e-13
UniRef100_C5GP07 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=A... 79 3e-13
UniRef100_A8PVZ5 Putative uncharacterized protein n=1 Tax=Malass... 78 4e-13
UniRef100_Q5KLG7 Pre-mRNA splicing factor, putative n=1 Tax=Filo... 78 5e-13
UniRef100_UPI000069DC34 Small nuclear ribonucleoprotein Sm D3 (s... 77 7e-13
UniRef100_Q9UUC6 Probable small nuclear ribonucleoprotein Sm D3 ... 77 1e-12
UniRef100_Q5CSL0 Small nucealr riboprotein SMD3, SM domain (Frag... 76 1e-12
UniRef100_Q5CHU4 Aspartyl protease-like n=1 Tax=Cryptosporidium ... 76 1e-12
UniRef100_Q4P1V4 Putative uncharacterized protein n=1 Tax=Ustila... 74 6e-12
UniRef100_C8TDZ5 Small nuclear ribonucleoprotein (Snrnp),putativ... 74 7e-12
UniRef100_B3RYX6 Putative uncharacterized protein (Fragment) n=1... 74 1e-11
UniRef100_Q750U6 AGL157Cp n=1 Tax=Eremothecium gossypii RepID=Q7... 73 1e-11
UniRef100_B6AHY5 LSM domain-containing protein n=1 Tax=Cryptospo... 73 2e-11
UniRef100_A8PNM2 Small nuclear ribonucleoprotein Sm D3, putative... 73 2e-11
UniRef100_C5DMT1 KLTH0G11396p n=1 Tax=Lachancea thermotolerans C... 72 3e-11
UniRef100_A1CHW9 Small nuclear ribonucleoprotein SmD3, putative ... 72 3e-11
UniRef100_UPI00005082E5 PREDICTED: similar to small nuclear ribo... 72 4e-11
UniRef100_UPI000050236F UPI000050236F related cluster n=1 Tax=Ra... 71 5e-11
UniRef100_Q6CGI5 YALI0A19030p n=1 Tax=Yarrowia lipolytica RepID=... 70 1e-10
UniRef100_A7ATD6 Small nuclear ribonucleoprotein (SnRNP), putati... 67 9e-10
UniRef100_A7TEN7 Putative uncharacterized protein n=1 Tax=Vander... 67 9e-10
UniRef100_C5DYM4 ZYRO0F14212p n=1 Tax=Zygosaccharomyces rouxii C... 67 1e-09
UniRef100_UPI00006CA838 Sm protein n=1 Tax=Tetrahymena thermophi... 66 2e-09
UniRef100_C4M3V1 Small nuclear ribonucleoprotein, putative n=1 T... 66 2e-09
UniRef100_B0E8Y9 Small nuclear ribonucleoprotein Sm D3, putative... 66 2e-09
UniRef100_C5KT85 Small nuclear ribonucleoprotein Sm D3, putative... 65 3e-09
UniRef100_Q6FJP5 Similar to uniprot|P43321 Saccharomyces cerevis... 65 4e-09
UniRef100_C4QYZ9 Core Sm protein Sm D3 n=1 Tax=Pichia pastoris G... 64 6e-09
UniRef100_C5LM67 Small nuclear ribonucleoprotein Sm D3, putative... 64 8e-09
UniRef100_Q6CQH0 KLLA0D17160p n=1 Tax=Kluyveromyces lactis RepID... 64 1e-08
UniRef100_UPI0000086245 small nuclear ribonucleoprotein (snRNP) ... 63 1e-08
UniRef100_C0H529 Small nuclear ribonucleoprotein (SnRNP), putati... 63 1e-08
UniRef100_Q4Y7X8 Small nuclear ribonucleoprotein (SnRNP), putati... 63 2e-08
UniRef100_Q4N2J1 Small nuclear ribonucleoprotein, putative n=1 T... 62 2e-08
UniRef100_A5K6G7 Small nuclear ribonucleoprotein (SnRNP), putati... 62 2e-08
UniRef100_Q4U9V3 SnRNP protein, putative n=1 Tax=Theileria annul... 62 3e-08
UniRef100_A0CT01 Chromosome undetermined scaffold_266, whole gen... 62 4e-08
UniRef100_A0C6K6 Chromosome undetermined scaffold_152, whole gen... 62 4e-08
UniRef100_A0C2U8 Chromosome undetermined scaffold_145, whole gen... 62 4e-08
UniRef100_B3L3B0 Small nuclear ribonucleoprotein, putative n=1 T... 61 5e-08
UniRef100_Q4Z2Q6 Small nuclear ribonucleoprotein (SnRNP), putati... 61 6e-08
UniRef100_C5KZA1 Small nuclear ribonucleoprotein Sm D3, putative... 61 6e-08
UniRef100_B8CAZ8 Predicted protein n=1 Tax=Thalassiosira pseudon... 59 2e-07
UniRef100_C5JW24 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=A... 59 2e-07
UniRef100_Q59NQ6 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=C... 59 2e-07
UniRef100_B9WH25 Small nuclear ribonucleoprotein, putative (Snrn... 59 2e-07
UniRef100_A5E2I2 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=L... 58 5e-07
UniRef100_Q6Q551 YLR147C n=1 Tax=Saccharomyces cerevisiae RepID=... 57 7e-07
UniRef100_Q6CHU2 YALI0A04961p n=1 Tax=Yarrowia lipolytica RepID=... 57 7e-07
UniRef100_P43321 Small nuclear ribonucleoprotein Sm D3 n=5 Tax=S... 57 7e-07
UniRef100_UPI0001A2C732 UPI0001A2C732 related cluster n=1 Tax=Da... 55 3e-06
UniRef100_UPI00016E41C7 UPI00016E41C7 related cluster n=1 Tax=Ta... 55 3e-06
UniRef100_Q8JHH1 Small nuclear ribonucleoprotein D1 n=1 Tax=Dani... 55 3e-06
UniRef100_A4VAK3 Small nuclear ribonucleoprotein D1 (Fragment) n... 55 3e-06
UniRef100_B7FP32 Predicted protein (Fragment) n=1 Tax=Phaeodacty... 55 3e-06
UniRef100_UPI000155496A PREDICTED: similar to small nuclear ribo... 55 4e-06
UniRef100_UPI00017B0BA6 UPI00017B0BA6 related cluster n=1 Tax=Te... 55 4e-06
UniRef100_C3YFH6 Putative uncharacterized protein n=1 Tax=Branch... 55 4e-06
UniRef100_Q7Z5A3 Small nuclear ribonucleoprotein Sm D1 n=1 Tax=H... 55 4e-06
UniRef100_C5M8G1 Small nuclear ribonucleoprotein Sm D3 n=1 Tax=C... 55 4e-06
UniRef100_Q6GLH6 MGC69276 protein n=3 Tax=Xenopus RepID=Q6GLH6_X... 55 5e-06
UniRef100_A0BYZ4 Chromosome undetermined scaffold_138, whole gen... 55 5e-06
UniRef100_UPI000155ECC8 PREDICTED: similar to mCG14669 n=1 Tax=E... 54 6e-06
UniRef100_UPI000155496B PREDICTED: similar to small nuclear ribo... 54 6e-06
UniRef100_UPI0000ECCCF6 Small nuclear ribonucleoprotein Sm D1 (s... 54 6e-06
UniRef100_UPI0000583F13 PREDICTED: similar to small nuclear ribo... 54 6e-06
UniRef100_P62314 Small nuclear ribonucleoprotein Sm D1 n=7 Tax=A... 54 6e-06