AV534709 ( FB084f07F )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV534709  FB084f07F
         (590 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q39194 Photosystem II reaction center W protein, chlor...   259   1e-67
UniRef100_A1YMY4 Component of 6.1 kDa polypeptide of photosystem...   243   6e-63
UniRef100_Q41908 Photosystem II 7kD protein n=1 Tax=Arabidopsis ...   241   4e-62
UniRef100_C6SWM3 Putative uncharacterized protein n=1 Tax=Glycin...   162   2e-38
UniRef100_C6SYI0 Putative uncharacterized protein n=1 Tax=Glycin...   159   2e-37
UniRef100_C6T2W3 Putative uncharacterized protein n=1 Tax=Glycin...   156   1e-36
UniRef100_C6SWZ8 Putative uncharacterized protein n=1 Tax=Glycin...   154   4e-36
UniRef100_Q41387 Photosystem II reaction center W protein, chlor...   150   9e-35
UniRef100_A7QVP6 Chromosome chr14 scaffold_190, whole genome sho...   149   2e-34
UniRef100_A7PUM2 Chromosome chr7 scaffold_31, whole genome shotg...   149   2e-34
UniRef100_A9PEP9 Putative uncharacterized protein n=1 Tax=Populu...   147   5e-34
UniRef100_B9GS65 Putative uncharacterized protein n=1 Tax=Populu...   145   3e-33
UniRef100_A9PJA9 Putative uncharacterized protein n=1 Tax=Populu...   143   9e-33
UniRef100_B7FHC2 Putative uncharacterized protein n=1 Tax=Medica...   140   6e-32
UniRef100_Q8W536 Photosystem II reaction center (Fragment) n=1 T...   137   5e-31
UniRef100_B9S4T1 Photosystem II reaction center W protein, chlor...   136   1e-30
UniRef100_C5XLL1 Putative uncharacterized protein Sb03g036090 n=...   129   1e-28
UniRef100_B9SZ65 Photosystem II reaction center W protein, chlor...   127   5e-28
UniRef100_B4FUI4 Photosystem II reaction center W protein n=1 Ta...   124   4e-27
UniRef100_B6TM37 Photosystem II reaction center W protein n=1 Ta...   124   7e-27
UniRef100_B6T2W4 Photosystem II reaction center W protein n=1 Ta...   124   7e-27
UniRef100_B6SMK2 Photosystem II reaction center W protein n=1 Ta...   121   4e-26
UniRef100_Q5ZBY9 Photosystem II reaction center W protein, chlor...   120   1e-25
UniRef100_A5C3A9 Putative uncharacterized protein n=1 Tax=Vitis ...   115   3e-24
UniRef100_B9ET99 Putative uncharacterized protein n=1 Tax=Oryza ...   111   4e-23
UniRef100_B6TMB3 Photosystem II reaction center W protein n=1 Ta...   108   4e-22
UniRef100_A9NL01 Putative uncharacterized protein n=1 Tax=Picea ...    96   2e-18
UniRef100_A9NLC2 Putative uncharacterized protein n=1 Tax=Picea ...    96   3e-18
UniRef100_C0PQQ7 Putative uncharacterized protein n=1 Tax=Picea ...    94   6e-18
UniRef100_A9SEQ6 Predicted protein (Fragment) n=1 Tax=Physcomitr...    93   2e-17
UniRef100_Q9AXN8 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitr...    79   3e-13
UniRef100_Q9AXP0 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitr...    77   8e-13
UniRef100_Q9AXN9 PSII subunit PsbW (Fragment) n=2 Tax=Physcomitr...    76   2e-12
UniRef100_A9SEQ5 Predicted protein n=1 Tax=Physcomitrella patens...    74   9e-12
UniRef100_A2SY30 Photosystem II reaction center W protein n=1 Ta...    69   2e-10
UniRef100_Q9SPI9 Photosystem II reaction center W protein, chlor...    69   2e-10
UniRef100_Q7XYI4 Photosystem II protein PsbW n=1 Tax=Bigelowiell...    58   6e-07
UniRef100_B5A4J5 Photosystem II reaction center W protein n=1 Ta...    58   6e-07
graphical overview:
alignment
UniRef100_Q39194 UniRef100_Q39194 UniRef100_A1YMY4 UniRef100_A1YMY4 UniRef100_Q41908 UniRef100_Q41908 UniRef100_C6SWM3 UniRef100_C6SWM3 UniRef100_C6SYI0 UniRef100_C6SYI0 UniRef100_C6T2W3 UniRef100_C6T2W3 UniRef100_C6SWZ8 UniRef100_C6SWZ8 UniRef100_Q41387 UniRef100_Q41387 UniRef100_A7QVP6 UniRef100_A7QVP6 UniRef100_A7PUM2 UniRef100_A7PUM2 UniRef100_A9PEP9 UniRef100_A9PEP9 UniRef100_B9GS65 UniRef100_B9GS65 UniRef100_A9PJA9 UniRef100_A9PJA9 UniRef100_B7FHC2 UniRef100_B7FHC2 UniRef100_Q8W536 UniRef100_Q8W536 UniRef100_B9S4T1 UniRef100_B9S4T1 UniRef100_C5XLL1 UniRef100_C5XLL1 UniRef100_B9SZ65 UniRef100_B9SZ65 UniRef100_B4FUI4 UniRef100_B4FUI4 UniRef100_B6TM37 UniRef100_B6TM37 UniRef100_B6T2W4 UniRef100_B6T2W4 UniRef100_B6SMK2 UniRef100_B6SMK2 UniRef100_Q5ZBY9 UniRef100_Q5ZBY9 UniRef100_A5C3A9 UniRef100_A5C3A9 UniRef100_B9ET99 UniRef100_B9ET99 UniRef100_B6TMB3 UniRef100_B6TMB3 UniRef100_A9NL01 UniRef100_A9NL01 UniRef100_A9NLC2 UniRef100_A9NLC2 UniRef100_C0PQQ7 UniRef100_C0PQQ7 UniRef100_A9SEQ6 UniRef100_A9SEQ6 UniRef100_Q9AXN8 UniRef100_Q9AXN8 UniRef100_Q9AXP0 UniRef100_Q9AXP0 UniRef100_Q9AXN9 UniRef100_Q9AXN9 UniRef100_A9SEQ5 UniRef100_A9SEQ5 UniRef100_A2SY30 UniRef100_A2SY30 UniRef100_Q9SPI9 UniRef100_Q9SPI9 UniRef100_Q7XYI4 UniRef100_Q7XYI4