AV526879 ( APZ23f03R )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV526879  APZ23f03R
         (244 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q9S7M0 Lhcb3 chlorophyll a/b binding protein n=1 Tax=A...   139   1e-31
UniRef100_Q42016 CHLOROPHYLL A-B BINDING PROTEIN (Fragment) n=1 ...   139   1e-31
UniRef100_Q42203 Complex II type III chlorophyll a/b binding pro...   136   8e-31
UniRef100_Q39339 LHC II Type III chlorophyll a /b binding protei...   130   5e-29
UniRef100_Q39340 LHC II Type III chlorophyll a/b binding protein...   122   9e-27
UniRef100_A7P1F1 Chromosome chr19 scaffold_4, whole genome shotg...   105   2e-21
UniRef100_Q9XQB1 LHCII type III chlorophyll a/b binding protein ...   103   8e-21
UniRef100_A6H5B7 Putative LHCII type III chlorophyll a/b binding...   101   3e-20
UniRef100_B9SID9 Chlorophyll A/B binding protein, putative n=1 T...   100   4e-20
UniRef100_A5BEB1 Putative uncharacterized protein n=1 Tax=Vitis ...    99   1e-19
UniRef100_Q9SDT2 Chlorophyll a/b-binding protein n=1 Tax=Daucus ...    99   1e-19
UniRef100_C6TKW2 Putative uncharacterized protein n=1 Tax=Glycin...    99   1e-19
UniRef100_A7QYH5 Chromosome undetermined scaffold_247, whole gen...    97   4e-19
UniRef100_Q5I8X1 Light-harvesting chlorophyll-a/b binding protei...    97   4e-19
UniRef100_C6T868 Putative uncharacterized protein n=1 Tax=Glycin...    97   4e-19
UniRef100_A5BW14 Putative uncharacterized protein n=1 Tax=Vitis ...    97   7e-19
UniRef100_B9I013 Light-harvesting complex II protein Lhcb3 n=1 T...    96   9e-19
UniRef100_Q04918 Chlorophyll a/b-binding protein n=1 Tax=Pisum s...    96   2e-18
UniRef100_P27489 Chlorophyll a-b binding protein 13, chloroplast...    95   3e-18
UniRef100_B9N576 Light-harvesting complex II protein Lhcb3 n=1 T...    94   6e-18
UniRef100_B1P0S0 Chloroplast chlorophyll-a/b binding protein n=1...    93   8e-18
UniRef100_C5XBK1 Putative uncharacterized protein Sb02g036380 n=...    85   2e-15
UniRef100_C5G6D5 Chloroplast chlorophyll a/b binding protein n=1...    85   2e-15
UniRef100_C5G6D4 Chloroplast chlorophyll a/b binding protein n=1...    85   2e-15
UniRef100_B7SAW4 Chloroplast chlorophyll a/b binding protein cab...    85   3e-15
UniRef100_B7SAW3 Chloroplast chlorophyll a/b binding protein cab...    85   3e-15
UniRef100_P27523 Chlorophyll a-b binding protein of LHCII type I...    85   3e-15
UniRef100_B6SUM9 Chlorophyll a-b binding protein of LHCII type I...    78   3e-13
UniRef100_A2YMN1 Putative uncharacterized protein n=1 Tax=Oryza ...    73   1e-11
UniRef100_Q6ZF30 Os07g0562700 protein n=1 Tax=Oryza sativa Japon...    72   2e-11
UniRef100_O22542 Chlorophyll a-b binding protein n=1 Tax=Oryza s...    70   9e-11
UniRef100_A9PJV4 Putative uncharacterized protein n=1 Tax=Populu...    59   2e-07
UniRef100_B9RN67 Chlorophyll A/B binding protein, putative n=1 T...    57   5e-07
UniRef100_Q3LFQ5 Chlorophyll a/b binding protein n=1 Tax=Panax g...    57   6e-07
UniRef100_D0F1Q5 Chlorophyll A/B binding protein n=1 Tax=Jatroph...    57   6e-07
UniRef100_B9T0C1 Chlorophyll A/B binding protein, putative n=1 T...    57   6e-07
UniRef100_Q84TM7 Chlorophyll a/b binding protein n=1 Tax=Nicotia...    57   8e-07
UniRef100_O82425 Light harvesting chlorophyll A/B binding protei...    57   8e-07
UniRef100_B9IAR5 Light-harvesting complex II protein Lhcb2 n=1 T...    56   1e-06
UniRef100_A5ASG6 Chromosome chr12 scaffold_47, whole genome shot...    56   1e-06
UniRef100_Q945D1 Putative chlorophyll-A-B-binding protein (Fragm...    55   2e-06
UniRef100_Q39341 LHCII Type III chlorophyll a/b binding protein ...    55   2e-06
UniRef100_A9PJH7 Putative uncharacterized protein n=1 Tax=Populu...    55   3e-06
UniRef100_A9PFW7 Light-harvesting complex II protein Lhcb2 n=1 T...    55   3e-06
UniRef100_B6STN4 Chlorophyll a-b binding protein 2 n=1 Tax=Zea m...    54   4e-06
UniRef100_P12062 Chlorophyll a-b binding protein 37, chloroplast...    54   4e-06
UniRef100_P12329 Chlorophyll a-b binding protein 1, chloroplasti...    54   4e-06
UniRef100_B1PL36 Chloroplast photosystem II type I chlorophyll A...    54   5e-06
UniRef100_Q8LK17 A-B binding protein (Fragment) n=1 Tax=Vicia fa...    53   9e-06
UniRef100_Q38713 Chlorophyll a/b binding protein n=1 Tax=Amarant...    53   9e-06
graphical overview:
alignment
UniRef100_Q9S7M0 UniRef100_Q9S7M0 UniRef100_Q42016 UniRef100_Q42016 UniRef100_Q42203 UniRef100_Q42203 UniRef100_Q39339 UniRef100_Q39339 UniRef100_Q39340 UniRef100_Q39340 UniRef100_A7P1F1 UniRef100_A7P1F1 UniRef100_Q9XQB1 UniRef100_Q9XQB1 UniRef100_A6H5B7 UniRef100_A6H5B7 UniRef100_B9SID9 UniRef100_B9SID9 UniRef100_A5BEB1 UniRef100_A5BEB1 UniRef100_Q9SDT2 UniRef100_Q9SDT2 UniRef100_C6TKW2 UniRef100_C6TKW2 UniRef100_A7QYH5 UniRef100_A7QYH5 UniRef100_Q5I8X1 UniRef100_Q5I8X1 UniRef100_C6T868 UniRef100_C6T868 UniRef100_A5BW14 UniRef100_A5BW14 UniRef100_B9I013 UniRef100_B9I013 UniRef100_Q04918 UniRef100_Q04918 UniRef100_P27489 UniRef100_P27489 UniRef100_B9N576 UniRef100_B9N576 UniRef100_B1P0S0 UniRef100_B1P0S0 UniRef100_C5XBK1 UniRef100_C5XBK1 UniRef100_C5G6D5 UniRef100_C5G6D5 UniRef100_C5G6D4 UniRef100_C5G6D4 UniRef100_B7SAW4 UniRef100_B7SAW4 UniRef100_B7SAW3 UniRef100_B7SAW3 UniRef100_P27523 UniRef100_P27523 UniRef100_B6SUM9 UniRef100_B6SUM9 UniRef100_A2YMN1 UniRef100_A2YMN1 UniRef100_Q6ZF30 UniRef100_Q6ZF30 UniRef100_O22542 UniRef100_O22542 UniRef100_A9PJV4 UniRef100_A9PJV4 UniRef100_B9RN67 UniRef100_B9RN67 UniRef100_Q3LFQ5 UniRef100_Q3LFQ5 UniRef100_D0F1Q5 UniRef100_D0F1Q5 UniRef100_B9T0C1 UniRef100_B9T0C1 UniRef100_Q84TM7 UniRef100_Q84TM7 UniRef100_O82425 UniRef100_O82425 UniRef100_B9IAR5 UniRef100_B9IAR5 UniRef100_A5ASG6 UniRef100_A5ASG6 UniRef100_Q945D1 UniRef100_Q945D1 UniRef100_Q39341 UniRef100_Q39341 UniRef100_A9PJH7 UniRef100_A9PJH7 UniRef100_A9PFW7 UniRef100_A9PFW7 UniRef100_B6STN4 UniRef100_B6STN4 UniRef100_P12062 UniRef100_P12062 UniRef100_P12329 UniRef100_P12329 UniRef100_B1PL36 UniRef100_B1PL36 UniRef100_Q8LK17 UniRef100_Q8LK17