AV441960 ( APD29e08_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV441960  APD29e08_r
         (270 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q9SS44 Transcription initiation factor IIB-2 n=2 Tax=A...   124   4e-27
UniRef100_B9II90 Predicted protein n=1 Tax=Populus trichocarpa R...   122   1e-26
UniRef100_P48513 Transcription initiation factor IIB n=1 Tax=Gly...   120   4e-26
UniRef100_B9T8A1 Transcription initiation factor iib, putative n...   118   2e-25
UniRef100_A7QJY1 Chromosome undetermined scaffold_109, whole gen...   117   3e-25
UniRef100_A7PWI7 Chromosome chr8 scaffold_34, whole genome shotg...   117   3e-25
UniRef100_B9H9K1 Predicted protein n=1 Tax=Populus trichocarpa R...   115   1e-24
UniRef100_Q8W0W3 Transcription initiation factor IIB n=3 Tax=Ory...   113   8e-24
UniRef100_B9RIF2 Transcription initiation factor iib, putative n...   112   2e-23
UniRef100_B6THD9 Transcription initiation factor IIB n=1 Tax=Zea...   112   2e-23
UniRef100_C0PDB7 Putative uncharacterized protein n=1 Tax=Zea ma...   110   4e-23
UniRef100_B4FHS1 Putative uncharacterized protein n=1 Tax=Zea ma...   110   4e-23
UniRef100_B4FE88 Putative uncharacterized protein n=1 Tax=Zea ma...   110   4e-23
UniRef100_C5X694 Putative uncharacterized protein Sb02g031020 n=...   110   6e-23
UniRef100_A7PQV4 Chromosome chr6 scaffold_25, whole genome shotg...   106   7e-22
UniRef100_P48512 Transcription initiation factor IIB-1 n=2 Tax=A...   106   9e-22
UniRef100_B9IEI3 Predicted protein n=1 Tax=Populus trichocarpa R...   105   1e-21
UniRef100_B8LMH3 Putative uncharacterized protein n=1 Tax=Picea ...   103   6e-21
UniRef100_A2Y747 Putative uncharacterized protein n=1 Tax=Oryza ...    82   2e-14
UniRef100_Q5KQD1 Os05g0548200 protein n=1 Tax=Oryza sativa Japon...    80   5e-14
UniRef100_B9FLG0 Putative uncharacterized protein n=1 Tax=Oryza ...    80   5e-14
UniRef100_C5YUY2 Putative uncharacterized protein Sb09g027310 n=...    79   2e-13
UniRef100_A9T0Q7 Predicted protein n=1 Tax=Physcomitrella patens...    79   2e-13
UniRef100_B9IK69 Predicted protein (Fragment) n=1 Tax=Populus tr...    77   5e-13
UniRef100_Q9LIA6 Transcription initiation factor IIB (TFIIB)-lik...    76   1e-12
UniRef100_Q6S7A3 Mutant TFIIB3 (Fragment) n=1 Tax=Arabidopsis th...    76   1e-12
UniRef100_A3AF21 Putative uncharacterized protein n=1 Tax=Oryza ...    71   4e-11
UniRef100_Q8H7W1 Putative transcription initiation factor IIB n=...    71   4e-11
UniRef100_A4S6Z8 Predicted protein n=1 Tax=Ostreococcus lucimari...    70   6e-11
UniRef100_A9RXM3 Predicted protein n=1 Tax=Physcomitrella patens...    69   1e-10
UniRef100_Q00VJ4 Transcription initiation factor IIB [Oryza sati...    67   5e-10
UniRef100_C1MZY4 Transcription initiation factor n=1 Tax=Micromo...    65   3e-09
UniRef100_C1EIY3 Predicted protein n=1 Tax=Micromonas sp. RCC299...    65   3e-09
UniRef100_B9R917 Transcription initiation factor iib, putative n...    62   3e-08
UniRef100_C5LAR8 Transcription initiation factor IIB, putative (...    60   8e-08
UniRef100_C5K7J2 Transcription initiation factor IIB, putative n...    60   8e-08
UniRef100_C5L7B7 Transcription initiation factor IIB, putative n...    59   2e-07
UniRef100_C5L7B6 Transcription initiation factor IIB, putative n...    59   2e-07
UniRef100_B3RPB4 Putative uncharacterized protein n=1 Tax=Tricho...    59   2e-07
UniRef100_A9BL15 TfIIB n=1 Tax=Cryptophyta RepID=A9BL15_9CRYP          57   5e-07
UniRef100_A7SH79 Predicted protein n=1 Tax=Nematostella vectensi...    57   5e-07
UniRef100_A4RNY3 Putative uncharacterized protein n=1 Tax=Magnap...    57   5e-07
UniRef100_UPI000023CFAA hypothetical protein FG00597.1 n=1 Tax=G...    56   1e-06
UniRef100_Q7QG89 AGAP009558-PA n=1 Tax=Anopheles gambiae RepID=Q...    56   1e-06
UniRef100_A8P2D9 Putative uncharacterized protein n=1 Tax=Coprin...    56   1e-06
UniRef100_C7NY62 Transcription factor TFIIB cyclin-related n=1 T...    56   1e-06
UniRef100_Q4P519 Putative uncharacterized protein n=1 Tax=Ustila...    56   1e-06
UniRef100_UPI000194CD4A PREDICTED: hypothetical protein n=1 Tax=...    55   2e-06
UniRef100_UPI000186D9D8 transcription initiation factor iib, put...    55   2e-06
UniRef100_UPI00017936E7 PREDICTED: similar to Transcription init...    55   2e-06
UniRef100_UPI00015B5246 PREDICTED: similar to Transcription init...    55   2e-06
UniRef100_UPI0000E80A74 PREDICTED: similar to IIB protein n=1 Ta...    55   2e-06
UniRef100_UPI0000ECB339 Transcription initiation factor IIB (Gen...    55   2e-06
UniRef100_Q7SX98 General transcription factor IIB n=1 Tax=Danio ...    55   2e-06
UniRef100_B5DHX4 GA27746 n=1 Tax=Drosophila pseudoobscura pseudo...    55   2e-06
UniRef100_B4NZP8 GE18945 n=1 Tax=Drosophila yakuba RepID=B4NZP8_...    55   2e-06
UniRef100_B4KHS4 GI20422 n=2 Tax=Drosophila RepID=B4KHS4_DROMO         55   2e-06
UniRef100_B4JPZ0 GH13607 n=1 Tax=Drosophila grimshawi RepID=B4JP...    55   2e-06
UniRef100_B4HWP7 GM18405 n=1 Tax=Drosophila sechellia RepID=B4HW...    55   2e-06
UniRef100_A8NYV2 Putative uncharacterized protein n=1 Tax=Coprin...    55   2e-06
UniRef100_P29052 Transcription initiation factor IIB n=6 Tax=Sop...    55   2e-06
UniRef100_UPI0001758201 PREDICTED: similar to Transcription init...    55   2e-06
UniRef100_Q28G23 General transcription factor IIBgeneral transcr...    55   2e-06
UniRef100_UPI0000E479AC PREDICTED: hypothetical protein n=1 Tax=...    55   3e-06
UniRef100_A2BIH7 General transcription factor IIB n=1 Tax=Danio ...    55   3e-06
UniRef100_C3ZCP1 Putative uncharacterized protein n=1 Tax=Branch...    55   3e-06
UniRef100_UPI00003C0936 PREDICTED: similar to Transcription init...    54   4e-06
UniRef100_B5XD83 Transcription initiation factor IIB n=1 Tax=Sal...    54   4e-06
UniRef100_B5XCZ8 Transcription initiation factor IIB n=1 Tax=Sal...    54   4e-06
UniRef100_Q17AB9 Transcription initiation factor TFIIB n=1 Tax=A...    54   4e-06
UniRef100_Q17AB8 Transcription initiation factor TFIIB n=1 Tax=A...    54   4e-06
UniRef100_B0WI57 Transcription initiation factor TFIIB n=1 Tax=C...    54   4e-06
UniRef100_C9SNA0 Transcription initiation factor IIB n=1 Tax=Ver...    54   4e-06
UniRef100_P29054 Transcription initiation factor IIB n=1 Tax=Xen...    54   4e-06
UniRef100_UPI000187D884 hypothetical protein MPER_07136 n=1 Tax=...    54   5e-06
UniRef100_UPI000155D43D PREDICTED: similar to general transcript...    54   5e-06
UniRef100_UPI0000F2BACE PREDICTED: similar to alpha initiation f...    54   5e-06
UniRef100_Q00403 Transcription initiation factor IIB n=5 Tax=Eut...    54   5e-06
UniRef100_UPI0000D99A17 PREDICTED: general transcription factor ...    54   5e-06
UniRef100_UPI00005A11DE PREDICTED: similar to general transcript...    54   5e-06
UniRef100_Q3UZJ3 Putative uncharacterized protein n=1 Tax=Mus mu...    54   5e-06
UniRef100_Q3UNY0 Putative uncharacterized protein n=1 Tax=Mus mu...    54   5e-06
UniRef100_C9JCC3 Putative uncharacterized protein GTF2B (Fragmen...    54   5e-06
UniRef100_B1APE1 General transcription factor IIB (Fragment) n=1...    54   5e-06
UniRef100_B2AN49 Predicted CDS Pa_6_8980 n=1 Tax=Podospora anser...    54   5e-06
UniRef100_P62915 Transcription initiation factor IIB n=3 Tax=Mur...    54   5e-06
UniRef100_Q2KIN8 Transcription initiation factor IIB n=1 Tax=Bos...    54   5e-06
UniRef100_UPI00017B0FC9 UPI00017B0FC9 related cluster n=1 Tax=Te...    54   7e-06
UniRef100_Q6B512 General transcription factor II B n=1 Tax=Oreoc...    54   7e-06
UniRef100_Q4SSL3 Chromosome 15 SCAF14367, whole genome shotgun s...    54   7e-06
UniRef100_Q7RAJ9 Transcription initiation factor iib n=1 Tax=Pla...    54   7e-06
UniRef100_A8X282 C. briggsae CBR-TTB-1 protein n=1 Tax=Caenorhab...    54   7e-06
UniRef100_Q7S978 Putative uncharacterized protein n=1 Tax=Neuros...    54   7e-06
UniRef100_B6JY64 Transcription factor TFIIB n=1 Tax=Schizosaccha...    54   7e-06
UniRef100_O13749 Transcription initiation factor IIB n=1 Tax=Sch...    54   7e-06
UniRef100_O16991 Transcription initiation factor IIB n=1 Tax=Cae...    54   7e-06
UniRef100_A5K9R2 Transcription initiation factor TFIIB, putative...    53   9e-06
UniRef100_B0CXM4 Predicted protein n=1 Tax=Laccaria bicolor S238...    53   9e-06
graphical overview:
alignment
UniRef100_Q9SS44 UniRef100_Q9SS44 UniRef100_B9II90 UniRef100_B9II90 UniRef100_P48513 UniRef100_P48513 UniRef100_B9T8A1 UniRef100_B9T8A1 UniRef100_A7QJY1 UniRef100_A7QJY1 UniRef100_A7PWI7 UniRef100_A7PWI7 UniRef100_B9H9K1 UniRef100_B9H9K1 UniRef100_Q8W0W3 UniRef100_Q8W0W3 UniRef100_B9RIF2 UniRef100_B9RIF2 UniRef100_B6THD9 UniRef100_B6THD9 UniRef100_C0PDB7 UniRef100_C0PDB7 UniRef100_B4FHS1 UniRef100_B4FHS1 UniRef100_B4FE88 UniRef100_B4FE88 UniRef100_C5X694 UniRef100_C5X694 UniRef100_A7PQV4 UniRef100_A7PQV4 UniRef100_P48512 UniRef100_P48512 UniRef100_B9IEI3 UniRef100_B9IEI3 UniRef100_B8LMH3 UniRef100_B8LMH3 UniRef100_A2Y747 UniRef100_A2Y747 UniRef100_Q5KQD1 UniRef100_Q5KQD1 UniRef100_B9FLG0 UniRef100_B9FLG0 UniRef100_C5YUY2 UniRef100_C5YUY2 UniRef100_A9T0Q7 UniRef100_A9T0Q7 UniRef100_B9IK69 UniRef100_B9IK69 UniRef100_Q9LIA6 UniRef100_Q9LIA6 UniRef100_Q6S7A3 UniRef100_Q6S7A3 UniRef100_A3AF21 UniRef100_A3AF21 UniRef100_Q8H7W1 UniRef100_Q8H7W1 UniRef100_A4S6Z8 UniRef100_A4S6Z8 UniRef100_A9RXM3 UniRef100_A9RXM3 UniRef100_Q00VJ4 UniRef100_Q00VJ4 UniRef100_C1MZY4 UniRef100_C1MZY4 UniRef100_C1EIY3 UniRef100_C1EIY3 UniRef100_B9R917 UniRef100_B9R917 UniRef100_C5LAR8 UniRef100_C5LAR8 UniRef100_C5K7J2 UniRef100_C5K7J2 UniRef100_C5L7B7 UniRef100_C5L7B7 UniRef100_C5L7B6 UniRef100_C5L7B6 UniRef100_B3RPB4 UniRef100_B3RPB4 UniRef100_A9BL15 UniRef100_A9BL15 UniRef100_A7SH79 UniRef100_A7SH79 UniRef100_A4RNY3 UniRef100_A4RNY3 UniRef100_UPI000023CFAA UniRef100_UPI000023CFAA UniRef100_Q7QG89 UniRef100_Q7QG89 UniRef100_A8P2D9 UniRef100_A8P2D9 UniRef100_C7NY62 UniRef100_C7NY62 UniRef100_Q4P519 UniRef100_Q4P519 UniRef100_UPI000194CD4A UniRef100_UPI000194CD4A UniRef100_UPI000186D9D8 UniRef100_UPI000186D9D8 UniRef100_UPI00017936E7 UniRef100_UPI00017936E7 UniRef100_UPI00015B5246 UniRef100_UPI00015B5246 UniRef100_UPI0000E80A74 UniRef100_UPI0000E80A74 UniRef100_UPI0000ECB339 UniRef100_UPI0000ECB339 UniRef100_Q7SX98 UniRef100_Q7SX98 UniRef100_B5DHX4 UniRef100_B5DHX4 UniRef100_B4NZP8 UniRef100_B4NZP8 UniRef100_B4KHS4 UniRef100_B4KHS4 UniRef100_B4JPZ0 UniRef100_B4JPZ0 UniRef100_B4HWP7 UniRef100_B4HWP7 UniRef100_A8NYV2 UniRef100_A8NYV2 UniRef100_P29052 UniRef100_P29052 UniRef100_UPI0001758201 UniRef100_UPI0001758201 UniRef100_Q28G23 UniRef100_Q28G23 UniRef100_UPI0000E479AC UniRef100_UPI0000E479AC UniRef100_A2BIH7 UniRef100_A2BIH7 UniRef100_C3ZCP1 UniRef100_C3ZCP1 UniRef100_UPI00003C0936 UniRef100_UPI00003C0936 UniRef100_B5XD83 UniRef100_B5XD83 UniRef100_B5XCZ8 UniRef100_B5XCZ8 UniRef100_Q17AB9 UniRef100_Q17AB9 UniRef100_Q17AB8 UniRef100_Q17AB8 UniRef100_B0WI57 UniRef100_B0WI57 UniRef100_C9SNA0 UniRef100_C9SNA0 UniRef100_P29054 UniRef100_P29054 UniRef100_UPI000187D884 UniRef100_UPI000187D884 UniRef100_UPI000155D43D UniRef100_UPI000155D43D UniRef100_UPI0000F2BACE UniRef100_UPI0000F2BACE UniRef100_Q00403 UniRef100_Q00403 UniRef100_UPI0000D99A17 UniRef100_UPI0000D99A17 UniRef100_UPI00005A11DE UniRef100_UPI00005A11DE UniRef100_Q3UZJ3 UniRef100_Q3UZJ3 UniRef100_Q3UNY0 UniRef100_Q3UNY0 UniRef100_C9JCC3 UniRef100_C9JCC3 UniRef100_B1APE1 UniRef100_B1APE1 UniRef100_B2AN49 UniRef100_B2AN49 UniRef100_P62915 UniRef100_P62915 UniRef100_Q2KIN8 UniRef100_Q2KIN8 UniRef100_UPI00017B0FC9 UniRef100_UPI00017B0FC9 UniRef100_Q6B512 UniRef100_Q6B512 UniRef100_Q4SSL3 UniRef100_Q4SSL3 UniRef100_Q7RAJ9 UniRef100_Q7RAJ9 UniRef100_A8X282 UniRef100_A8X282 UniRef100_Q7S978 UniRef100_Q7S978 UniRef100_B6JY64 UniRef100_B6JY64 UniRef100_O13749 UniRef100_O13749 UniRef100_O16991 UniRef100_O16991 UniRef100_A5K9R2 UniRef100_A5K9R2