[UP]
[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 222 bits (566), Expect = 2e-56
Identities = 108/206 (52%), Positives = 140/206 (67%), Gaps = 5/206 (2%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
WG T T+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +E
Sbjct: 259 WGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETME 318
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKG 262
SK E+YI+I GID+ P +C+QINY QRF WF +++P K ++ +PSRV N+ K
Sbjct: 319 SKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKE 378
Query: 261 VDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HY 88
TN+VNAFAIMCATTGMH GKCI+HF+W ++G++SF +GMG + H+
Sbjct: 379 ATVTNYVNAFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHH 438
Query: 87 GETRVFSIYDNSYSIPFEFGSFAGPV 10
GE + +S ++PFEFGSFAGPV
Sbjct: 439 GEFHLGGPLSSSLAVPFEFGSFAGPV 464
[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 222 bits (566), Expect = 2e-56
Identities = 108/206 (52%), Positives = 140/206 (67%), Gaps = 5/206 (2%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
WG T T+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +E
Sbjct: 1069 WGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETME 1128
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKG 262
SK E+YI+I GID+ P +C+QINY QRF WF +++P K ++ +PSRV N+ K
Sbjct: 1129 SKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKE 1188
Query: 261 VDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HY 88
TN+VNAFAIMCATTGMH GKCI+HF+W ++G++SF +GMG + H+
Sbjct: 1189 ATVTNYVNAFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHH 1248
Query: 87 GETRVFSIYDNSYSIPFEFGSFAGPV 10
GE + +S ++PFEFGSFAGPV
Sbjct: 1249 GEFHLGGPLSSSLAVPFEFGSFAGPV 1274
[3][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 217 bits (552), Expect = 7e-55
Identities = 102/203 (50%), Positives = 135/203 (66%), Gaps = 2/203 (0%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE
Sbjct: 258 WGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVE 317
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGV 259
+ E+YI+I GI++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V
Sbjct: 318 TGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHV 377
Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGET 79
TNFVNA AI+CATTGMH G C +HF+W W H E K G L F GMG + H G+T
Sbjct: 378 KVTNFVNALAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDT 436
Query: 78 RVFSIYDNSYSIPFEFGSFAGPV 10
++ N++S+PF+FGSFAGP+
Sbjct: 437 MCYNSLSNTHSVPFQFGSFAGPI 459
[4][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 217 bits (552), Expect = 7e-55
Identities = 102/203 (50%), Positives = 135/203 (66%), Gaps = 2/203 (0%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE
Sbjct: 1095 WGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVE 1154
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGV 259
+ E+YI+I GI++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V
Sbjct: 1155 TGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHV 1214
Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGET 79
TNFVNA AI+CATTGMH G C +HF+W W H E K G L F GMG + H G+T
Sbjct: 1215 KVTNFVNALAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDT 1273
Query: 78 RVFSIYDNSYSIPFEFGSFAGPV 10
++ N++S+PF+FGSFAGP+
Sbjct: 1274 MCYNSLSNTHSVPFQFGSFAGPI 1296
[5][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 215 bits (548), Expect = 2e-54
Identities = 103/178 (57%), Positives = 127/178 (71%), Gaps = 4/178 (2%)
Frame = -2
Query: 531 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQR 352
IQ+ +TANFG GA+FW++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINYKQR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343
Query: 351 FGWFMVKP-EGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFT 175
FGWFM+ P + T E +PSR+ N+ +K C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403
Query: 174 WAWKHNIEASKMKGNLS---FGTGMGTKDVHYGETRVFSIYDNSYSIPFEFGSFAGPV 10
W+W N EA K +S + + + G R +YDN+YSIPFEFGSFAGPV
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILG-IRGILVYDNAYSIPFEFGSFAGPV 460
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 206 bits (523), Expect = 2e-51
Identities = 96/205 (46%), Positives = 135/205 (65%), Gaps = 4/205 (1%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E
Sbjct: 1091 WGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETME 1150
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGV 259
+ F++YI IHGI+++ LC++INY Q F WFM++ T + +P+R++NL K V
Sbjct: 1151 TGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEV 1210
Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYG 85
TNFVNA AIMCATTGMH+GKC +HF+W W + + + G +S TGMG V H+G
Sbjct: 1211 QVTNFVNALAIMCATTGMHFGKCTLHFSWGW-YRGKLADQSGAVSLQTGMGRAAVAEHFG 1269
Query: 84 ETRVFSIYDNSYSIPFEFGSFAGPV 10
F S+S+PF+FGSFAGP+
Sbjct: 1270 GKHNFCYPATSFSLPFQFGSFAGPI 1294
[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 202 bits (513), Expect = 2e-50
Identities = 95/205 (46%), Positives = 133/205 (64%), Gaps = 4/205 (1%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E
Sbjct: 258 WGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETME 317
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGV 259
+ F++YI IHGI + +LC++INY Q F WFM++ T + +P+R++NL K V
Sbjct: 318 TGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEV 377
Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYG 85
TNFVNA AIMCATTGMH+GKC +HF+W W + + G S TGMG V H+G
Sbjct: 378 QITNFVNALAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFG 436
Query: 84 ETRVFSIYDNSYSIPFEFGSFAGPV 10
F+ ++S+PF+FGSFAGP+
Sbjct: 437 GRHSFNYPATNFSLPFQFGSFAGPI 461
[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 202 bits (513), Expect = 2e-50
Identities = 95/205 (46%), Positives = 133/205 (64%), Gaps = 4/205 (1%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E
Sbjct: 1090 WGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETME 1149
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGV 259
+ F++YI IHGI + +LC++INY Q F WFM++ T + +P+R++NL K V
Sbjct: 1150 TGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEV 1209
Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYG 85
TNFVNA AIMCATTGMH+GKC +HF+W W + + G S TGMG V H+G
Sbjct: 1210 QITNFVNALAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFG 1268
Query: 84 ETRVFSIYDNSYSIPFEFGSFAGPV 10
F+ ++S+PF+FGSFAGP+
Sbjct: 1269 GRHSFNYPATNFSLPFQFGSFAGPI 1293
[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 186 bits (473), Expect = 1e-45
Identities = 97/203 (47%), Positives = 127/203 (62%), Gaps = 2/203 (0%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +E
Sbjct: 83 WGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIE 142
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVD 256
S E+YI+I GI++ LC+ INYKQ FGWF +V+ T+KE + +PSR++N+ K +
Sbjct: 143 SALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAE 202
Query: 255 CTNFVNAFAIMCATTGMHWGK-CIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGET 79
N VNAF+IMCATTGM WG +H H +A K S G+ T+ H G+
Sbjct: 203 VINHVNAFSIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDI 257
Query: 78 RVFSIYDNSYSIPFEFGSFAGPV 10
++ + S IPFE GSFAGPV
Sbjct: 258 KMCGVLATSQVIPFEIGSFAGPV 280
[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 186 bits (473), Expect = 1e-45
Identities = 97/203 (47%), Positives = 127/203 (62%), Gaps = 2/203 (0%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +E
Sbjct: 1103 WGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIE 1162
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVD 256
S E+YI+I GI++ LC+ INYKQ FGWF +V+ T+KE + +PSR++N+ K +
Sbjct: 1163 SALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAE 1222
Query: 255 CTNFVNAFAIMCATTGMHWGK-CIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGET 79
N VNAF+IMCATTGM WG +H H +A K S G+ T+ H G+
Sbjct: 1223 VINHVNAFSIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDI 1277
Query: 78 RVFSIYDNSYSIPFEFGSFAGPV 10
++ + S IPFE GSFAGPV
Sbjct: 1278 KMCGVLATSQVIPFEIGSFAGPV 1300
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 126 bits (316), Expect = 2e-27
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 2/204 (0%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
W + H D G + +L I+ FY+++ +G GA + L SPM+P ++
Sbjct: 270 WSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIK 329
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
+ F+ +I G +C+ IN+ QRFGWF V+P + ++ + ++L + +
Sbjct: 330 APFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKV 389
Query: 252 TNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GET 79
T + NAF MC T+ MH+G I+HF+W + A+ G ++ G G ++ ++ G
Sbjct: 390 TGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHC 449
Query: 78 RVFSIYDNSYSIPFEFGSFAGPVP 7
R FSIY+ ++P E G+FAGP P
Sbjct: 450 RNFSIYEGKATVPLELGTFAGPTP 473
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 124 bits (310), Expect = 8e-27
Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 2/204 (0%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
W I H D G + +L I+ FY+++ +G GA V L SPM+P ++
Sbjct: 258 WSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIK 317
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
+ F+ +I G +C+ IN+ QRFGWF V+P + ++ + ++L + +
Sbjct: 318 APFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKV 377
Query: 252 TNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GET 79
T + NAF MC T+ MH+G I+HF+W + A+ G ++ G G ++ ++ G
Sbjct: 378 TGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHC 437
Query: 78 RVFSIYDNSYSIPFEFGSFAGPVP 7
R SIY+ ++P E G+FAGP P
Sbjct: 438 RNLSIYEGRATVPLELGTFAGPTP 461
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 124 bits (310), Expect = 8e-27
Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 2/204 (0%)
Frame = -2
Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
W I H D G + +L I+ FY+++ +G GA V L SPM+P ++
Sbjct: 941 WSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIK 1000
Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
+ F+ +I G +C+ IN+ QRFGWF V+P + ++ + ++L + +
Sbjct: 1001 APFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKV 1060
Query: 252 TNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GET 79
T + NAF MC T+ MH+G I+HF+W + A+ G ++ G G ++ ++ G
Sbjct: 1061 TGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHC 1120
Query: 78 RVFSIYDNSYSIPFEFGSFAGPVP 7
R SIY+ ++P E G+FAGP P
Sbjct: 1121 RNLSIYEGRATVPLELGTFAGPTP 1144
[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 70.9 bits (172), Expect = 8e-11
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 5/203 (2%)
Frame = -2
Query: 600 PTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 421
PT+ Q PH + G E+ I++ F+S A + ++PLS P+AP+ +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332
Query: 420 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
F + I+ DSQ P + F +KP+ +P + + K
Sbjct: 333 FIVHINTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 392
Query: 252 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETR 76
T N + + A TG H+G+ V +W + +A +G++S T ++ G+ R
Sbjct: 393 TLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 450
Query: 75 VFSIYDNSYSIPFEFGSFAGPVP 7
++ + IP GS+AG P
Sbjct: 451 IYDLRRTEAEIPIFLGSYAGATP 473
[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 69.3 bits (168), Expect = 2e-10
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 5/205 (2%)
Frame = -2
Query: 606 TTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESK 427
T PT+ Q PH + G E+ I++ +S A + ++PLS P+AP+
Sbjct: 271 TPPTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGS 330
Query: 426 FEFYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGV 259
+EF + I DSQ P + F +KP+ +P + + K
Sbjct: 331 YEFIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDA 390
Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GE 82
T N + + A TG H+G+ V +W + +A +G++S T ++ G+
Sbjct: 391 TVTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQ 448
Query: 81 TRVFSIYDNSYSIPFEFGSFAGPVP 7
R++ + IP GS+AG P
Sbjct: 449 ARIYDLRRTEAEIPIFLGSYAGATP 473
[16][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 68.9 bits (167), Expect = 3e-10
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Frame = -2
Query: 600 PTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 421
PT+ Q PH + G E+ I++ +S A + ++PLS P+AP+ +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332
Query: 420 FYIRIH--GIDSQPDLCKQINYKQRFGWFM---VKPEGTDKEFQMFVPSRVSNLVIKGVD 256
F + I+ DSQ + + + WF +KP+ +P + + K
Sbjct: 333 FIVHINTWRPDSQVH-PPMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDAT 391
Query: 255 CTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GET 79
T N + + A TG H+G+ V +W + +A +G++S T ++ G+
Sbjct: 392 VTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQA 449
Query: 78 RVFSIYDNSYSIPFEFGSFAGPVP 7
R++ + IP GS+AG P
Sbjct: 450 RIYDLRRTEAEIPIFLGSYAGATP 473
[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 67.4 bits (163), Expect = 9e-10
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Frame = -2
Query: 600 PTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 421
PT+ Q PH + G E+ I++ +S A + ++PLS P+AP+ +E
Sbjct: 271 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 330
Query: 420 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
F + I DSQ P + F +KP+ +P + + K
Sbjct: 331 FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 390
Query: 252 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETR 76
T N + + A TG H+G+ V +W + +A +G++S T ++ G+ R
Sbjct: 391 TLASNPLSWLVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 448
Query: 75 VFSIYDNSYSIPFEFGSFAGPVP 7
++ + IP GS+AG P
Sbjct: 449 IYDLRRTEAEIPIFLGSYAGATP 471
[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 67.4 bits (163), Expect = 9e-10
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Frame = -2
Query: 600 PTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 421
PT+ Q PH + G E+ I++ +S A + ++PLS P+AP+ +E
Sbjct: 859 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 918
Query: 420 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
F + I DSQ P + F +KP+ +P + + K
Sbjct: 919 FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 978
Query: 252 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETR 76
T N + + A TG H+G+ V +W + +A +G++S T ++ G+ R
Sbjct: 979 TLASNPLSWLVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 1036
Query: 75 VFSIYDNSYSIPFEFGSFAGPVP 7
++ + IP GS+AG P
Sbjct: 1037 IYDLRRTEAEIPIFLGSYAGATP 1059
[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 66.6 bits (161), Expect = 2e-09
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 5/205 (2%)
Frame = -2
Query: 606 TTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESK 427
T PT+ Q PH + G E+ ++ +S++ + ++PLS P+AP+
Sbjct: 271 TPPTLRQVLWGPHQIMHGDGQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGS 330
Query: 426 FEFYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGV 259
+EF + I DSQ P + F +KP+ +P + + K
Sbjct: 331 YEFIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDA 390
Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GE 82
T N + + A TG H+G+ V +W + +A +G++S T ++ G+
Sbjct: 391 TVTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQ 448
Query: 81 TRVFSIYDNSYSIPFEFGSFAGPVP 7
R++ + IP GS+AG P
Sbjct: 449 ARIYDLRRTEAEIPIFLGSYAGATP 473
[20][TOP]
>UniRef100_Q9IV56 Polyprotein n=1 Tax=Olive latent ringspot virus RepID=Q9IV56_9SECO
Length = 1145
Score = 55.1 bits (131), Expect = 5e-06
Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 11/194 (5%)
Frame = -2
Query: 570 HCDIVEGGSGELRIQSPF------YSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYI- 412
H + GG+ + SPF Y + S G + +V + P+AP +K E+++
Sbjct: 908 HITLEGGGNFSFPLDSPFSSAPTRYVSTADSSSGCELYVDTICGPIAPADSVTKLEYFLH 967
Query: 411 --RIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFV- 241
R+ G + P+L +I G + KE + +P R I DCT +
Sbjct: 968 FDRLEGTMTAPNLVAEI------GSLWCRVTSFLKE-DVDIPIRARIYDIAAKDCTLELA 1020
Query: 240 -NAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSI 64
N F+ M A TG G+ V + +W N+EASK+KG++ F V Y V S
Sbjct: 1021 TNPFSKMIAATGFLEGQ--VTLSVSWSTNVEASKIKGHIIF--------VVYDADLVNSF 1070
Query: 63 YDNSYSIPFEFGSF 22
S +P GSF
Sbjct: 1071 DGASTVVPMAKGSF 1084
[21][TOP]
>UniRef100_Q9QRA5 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA5_9SECO
Length = 562
Score = 54.7 bits (130), Expect = 6e-06
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Frame = -2
Query: 606 TTPTIAQTGQMPHCDIVEG-GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVES 430
T ++ + Q PH + +G G+ L I +PF + A+F + + + ++ P +P ++
Sbjct: 269 TDISLEEALQRPHFILKDGQGAFSLPISTPF-AAASFLEDMLRLEIFAIAGPFSPRDNKA 327
Query: 429 KFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCT 250
KF F I+ + + I +Q F W + + D +++ P+R+ +++ D
Sbjct: 328 KFHFMCYFDHIELDEQVPRTIAGEQLFNWCVFQNFKID-DWRYEWPARLPDILDDKSDVL 386
Query: 249 NFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLS--FGTGMGTKDVHYGETR 76
+ +++ ++TG G+ F + W N A MKG+ S G G +++ T
Sbjct: 387 LRQHPLSLLISSTGFFTGR--ASFVFQWGLNANAGNMKGSFSARLAFGKGVEEIEQTSTV 444
Query: 75 VFSIYDNSYSIPFEFGSFAG 16
+ IP EF +F G
Sbjct: 445 HPLVGACEARIPVEFKTFTG 464