BB940096 ( RCC13802 )

[UP]


[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI0000163D16
          Length = 514

 Score =  222 bits (566), Expect = 2e-56
 Identities = 108/206 (52%), Positives = 140/206 (67%), Gaps = 5/206 (2%)
 Frame = -2

Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
           WG T T+ Q  QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +E
Sbjct: 259 WGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETME 318

Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKG 262
           SK E+YI+I GID+ P +C+QINY QRF WF +++P      K  ++ +PSRV N+  K 
Sbjct: 319 SKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKE 378

Query: 261 VDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HY 88
              TN+VNAFAIMCATTGMH GKCI+HF+W          ++G++SF +GMG   +  H+
Sbjct: 379 ATVTNYVNAFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHH 438

Query: 87  GETRVFSIYDNSYSIPFEFGSFAGPV 10
           GE  +     +S ++PFEFGSFAGPV
Sbjct: 439 GEFHLGGPLSSSLAVPFEFGSFAGPV 464

[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
          Length = 1324

 Score =  222 bits (566), Expect = 2e-56
 Identities = 108/206 (52%), Positives = 140/206 (67%), Gaps = 5/206 (2%)
 Frame = -2

Query: 612  WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
            WG T T+ Q  QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +E
Sbjct: 1069 WGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETME 1128

Query: 432  SKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKG 262
            SK E+YI+I GID+ P +C+QINY QRF WF +++P      K  ++ +PSRV N+  K 
Sbjct: 1129 SKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKE 1188

Query: 261  VDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HY 88
               TN+VNAFAIMCATTGMH GKCI+HF+W          ++G++SF +GMG   +  H+
Sbjct: 1189 ATVTNYVNAFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHH 1248

Query: 87   GETRVFSIYDNSYSIPFEFGSFAGPV 10
            GE  +     +S ++PFEFGSFAGPV
Sbjct: 1249 GEFHLGGPLSSSLAVPFEFGSFAGPV 1274

[3][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
          Length = 520

 Score =  217 bits (552), Expect = 7e-55
 Identities = 102/203 (50%), Positives = 135/203 (66%), Gaps = 2/203 (0%)
 Frame = -2

Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
           WGT P   Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE
Sbjct: 258 WGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVE 317

Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGV 259
           +  E+YI+I GI++ P LC++INYKQRF W +++     K    ++ +PSR+ NL  K V
Sbjct: 318 TGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHV 377

Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGET 79
             TNFVNA AI+CATTGMH G C +HF+W W H  E  K  G L F  GMG  + H G+T
Sbjct: 378 KVTNFVNALAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDT 436

Query: 78  RVFSIYDNSYSIPFEFGSFAGPV 10
             ++   N++S+PF+FGSFAGP+
Sbjct: 437 MCYNSLSNTHSVPFQFGSFAGPI 459

[4][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
          Length = 1357

 Score =  217 bits (552), Expect = 7e-55
 Identities = 102/203 (50%), Positives = 135/203 (66%), Gaps = 2/203 (0%)
 Frame = -2

Query: 612  WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
            WGT P   Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE
Sbjct: 1095 WGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVE 1154

Query: 432  SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGV 259
            +  E+YI+I GI++ P LC++INYKQRF W +++     K    ++ +PSR+ NL  K V
Sbjct: 1155 TGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHV 1214

Query: 258  DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGET 79
              TNFVNA AI+CATTGMH G C +HF+W W H  E  K  G L F  GMG  + H G+T
Sbjct: 1215 KVTNFVNALAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDT 1273

Query: 78   RVFSIYDNSYSIPFEFGSFAGPV 10
              ++   N++S+PF+FGSFAGP+
Sbjct: 1274 MCYNSLSNTHSVPFQFGSFAGPI 1296

[5][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
           RepID=Q64959_9SECO
          Length = 510

 Score =  215 bits (548), Expect = 2e-54
 Identities = 103/178 (57%), Positives = 127/178 (71%), Gaps = 4/178 (2%)
 Frame = -2

Query: 531 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQR 352
           IQ+   +TANFG  GA+FW++PLS+P AP+ VE+KFEFYIRI GID  PDLC+QINYKQR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343

Query: 351 FGWFMVKP-EGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFT 175
           FGWFM+ P + T  E    +PSR+ N+ +K   C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403

Query: 174 WAWKHNIEASKMKGNLS---FGTGMGTKDVHYGETRVFSIYDNSYSIPFEFGSFAGPV 10
           W+W  N EA K    +S       +  + +  G  R   +YDN+YSIPFEFGSFAGPV
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILG-IRGILVYDNAYSIPFEFGSFAGPV 460

[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
          Length = 1344

 Score =  206 bits (523), Expect = 2e-51
 Identities = 96/205 (46%), Positives = 135/205 (65%), Gaps = 4/205 (1%)
 Frame = -2

Query: 612  WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
            WGT PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E
Sbjct: 1091 WGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETME 1150

Query: 432  SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGV 259
            + F++YI IHGI+++  LC++INY Q F WFM++     T     + +P+R++NL  K V
Sbjct: 1151 TGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEV 1210

Query: 258  DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYG 85
              TNFVNA AIMCATTGMH+GKC +HF+W W +  + +   G +S  TGMG   V  H+G
Sbjct: 1211 QVTNFVNALAIMCATTGMHFGKCTLHFSWGW-YRGKLADQSGAVSLQTGMGRAAVAEHFG 1269

Query: 84   ETRVFSIYDNSYSIPFEFGSFAGPV 10
                F     S+S+PF+FGSFAGP+
Sbjct: 1270 GKHNFCYPATSFSLPFQFGSFAGPI 1294

[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
          Length = 511

 Score =  202 bits (513), Expect = 2e-50
 Identities = 95/205 (46%), Positives = 133/205 (64%), Gaps = 4/205 (1%)
 Frame = -2

Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
           WGT PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E
Sbjct: 258 WGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETME 317

Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGV 259
           + F++YI IHGI  + +LC++INY Q F WFM++     T     + +P+R++NL  K V
Sbjct: 318 TGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEV 377

Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYG 85
             TNFVNA AIMCATTGMH+GKC +HF+W W    + +   G  S  TGMG   V  H+G
Sbjct: 378 QITNFVNALAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFG 436

Query: 84  ETRVFSIYDNSYSIPFEFGSFAGPV 10
               F+    ++S+PF+FGSFAGP+
Sbjct: 437 GRHSFNYPATNFSLPFQFGSFAGPI 461

[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
          Length = 1343

 Score =  202 bits (513), Expect = 2e-50
 Identities = 95/205 (46%), Positives = 133/205 (64%), Gaps = 4/205 (1%)
 Frame = -2

Query: 612  WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
            WGT PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E
Sbjct: 1090 WGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETME 1149

Query: 432  SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGV 259
            + F++YI IHGI  + +LC++INY Q F WFM++     T     + +P+R++NL  K V
Sbjct: 1150 TGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEV 1209

Query: 258  DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYG 85
              TNFVNA AIMCATTGMH+GKC +HF+W W    + +   G  S  TGMG   V  H+G
Sbjct: 1210 QITNFVNALAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFG 1268

Query: 84   ETRVFSIYDNSYSIPFEFGSFAGPV 10
                F+    ++S+PF+FGSFAGP+
Sbjct: 1269 GRHSFNYPATNFSLPFQFGSFAGPI 1293

[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
           virus RepID=Q6XPY1_9SECO
          Length = 330

 Score =  186 bits (473), Expect = 1e-45
 Identities = 97/203 (47%), Positives = 127/203 (62%), Gaps = 2/203 (0%)
 Frame = -2

Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
           WG   T+ Q  QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +E
Sbjct: 83  WGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIE 142

Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVD 256
           S  E+YI+I GI++   LC+ INYKQ FGWF +V+   T+KE  + +PSR++N+  K  +
Sbjct: 143 SALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAE 202

Query: 255 CTNFVNAFAIMCATTGMHWGK-CIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGET 79
             N VNAF+IMCATTGM WG    +H      H  +A   K   S   G+ T+  H G+ 
Sbjct: 203 VINHVNAFSIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDI 257

Query: 78  RVFSIYDNSYSIPFEFGSFAGPV 10
           ++  +   S  IPFE GSFAGPV
Sbjct: 258 KMCGVLATSQVIPFEIGSFAGPV 280

[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
            RepID=Q6JX06_9SECO
          Length = 1350

 Score =  186 bits (473), Expect = 1e-45
 Identities = 97/203 (47%), Positives = 127/203 (62%), Gaps = 2/203 (0%)
 Frame = -2

Query: 612  WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
            WG   T+ Q  QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +E
Sbjct: 1103 WGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIE 1162

Query: 432  SKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVD 256
            S  E+YI+I GI++   LC+ INYKQ FGWF +V+   T+KE  + +PSR++N+  K  +
Sbjct: 1163 SALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAE 1222

Query: 255  CTNFVNAFAIMCATTGMHWGK-CIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGET 79
              N VNAF+IMCATTGM WG    +H      H  +A   K   S   G+ T+  H G+ 
Sbjct: 1223 VINHVNAFSIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDI 1277

Query: 78   RVFSIYDNSYSIPFEFGSFAGPV 10
            ++  +   S  IPFE GSFAGPV
Sbjct: 1278 KMCGVLATSQVIPFEIGSFAGPV 1300

[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
           RepID=Q1T7B1_CNSV
          Length = 569

 Score =  126 bits (316), Expect = 2e-27
 Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 2/204 (0%)
 Frame = -2

Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
           W     +       H D   G + +L I+  FY+++ +G  GA   +  L SPM+P  ++
Sbjct: 270 WSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIK 329

Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
           + F+   +I G      +C+ IN+ QRFGWF V+P  +    ++ +    ++L  + +  
Sbjct: 330 APFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKV 389

Query: 252 TNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GET 79
           T + NAF  MC T+ MH+G  I+HF+W  +     A+   G ++   G G ++ ++ G  
Sbjct: 390 TGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHC 449

Query: 78  RVFSIYDNSYSIPFEFGSFAGPVP 7
           R FSIY+   ++P E G+FAGP P
Sbjct: 450 RNFSIYEGKATVPLELGTFAGPTP 473

[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI0000164A26
          Length = 564

 Score =  124 bits (310), Expect = 8e-27
 Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 2/204 (0%)
 Frame = -2

Query: 612 WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
           W     I       H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  ++
Sbjct: 258 WSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIK 317

Query: 432 SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
           + F+   +I G      +C+ IN+ QRFGWF V+P  +    ++ +    ++L  + +  
Sbjct: 318 APFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKV 377

Query: 252 TNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GET 79
           T + NAF  MC T+ MH+G  I+HF+W  +     A+   G ++   G G ++ ++ G  
Sbjct: 378 TGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHC 437

Query: 78  RVFSIYDNSYSIPFEFGSFAGPVP 7
           R  SIY+   ++P E G+FAGP P
Sbjct: 438 RNLSIYEGRATVPLELGTFAGPTP 461

[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
          Length = 1240

 Score =  124 bits (310), Expect = 8e-27
 Identities = 64/204 (31%), Positives = 106/204 (51%), Gaps = 2/204 (0%)
 Frame = -2

Query: 612  WGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVE 433
            W     I       H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  ++
Sbjct: 941  WSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIK 1000

Query: 432  SKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
            + F+   +I G      +C+ IN+ QRFGWF V+P  +    ++ +    ++L  + +  
Sbjct: 1001 APFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKV 1060

Query: 252  TNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GET 79
            T + NAF  MC T+ MH+G  I+HF+W  +     A+   G ++   G G ++ ++ G  
Sbjct: 1061 TGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHC 1120

Query: 78   RVFSIYDNSYSIPFEFGSFAGPVP 7
            R  SIY+   ++P E G+FAGP P
Sbjct: 1121 RNLSIYEGRATVPLELGTFAGPTP 1144

[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
          Length = 515

 Score = 70.9 bits (172), Expect = 8e-11
 Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 5/203 (2%)
 Frame = -2

Query: 600 PTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 421
           PT+ Q    PH  +   G  E+ I++ F+S A       +  ++PLS P+AP+     +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332

Query: 420 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
           F + I+    DSQ  P +         F    +KP+         +P  + +   K    
Sbjct: 333 FIVHINTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 392

Query: 252 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETR 76
           T   N  + + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+ R
Sbjct: 393 TLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 450

Query: 75  VFSIYDNSYSIPFEFGSFAGPVP 7
           ++ +      IP   GS+AG  P
Sbjct: 451 IYDLRRTEAEIPIFLGSYAGATP 473

[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
          Length = 515

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 5/205 (2%)
 Frame = -2

Query: 606 TTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESK 427
           T PT+ Q    PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     
Sbjct: 271 TPPTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGS 330

Query: 426 FEFYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGV 259
           +EF + I     DSQ  P +         F    +KP+         +P  + +   K  
Sbjct: 331 YEFIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDA 390

Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GE 82
             T   N  + + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+
Sbjct: 391 TVTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQ 448

Query: 81  TRVFSIYDNSYSIPFEFGSFAGPVP 7
            R++ +      IP   GS+AG  P
Sbjct: 449 ARIYDLRRTEAEIPIFLGSYAGATP 473

[16][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
          Length = 515

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
 Frame = -2

Query: 600 PTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 421
           PT+ Q    PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332

Query: 420 FYIRIH--GIDSQPDLCKQINYKQRFGWFM---VKPEGTDKEFQMFVPSRVSNLVIKGVD 256
           F + I+    DSQ       +  + + WF    +KP+         +P  + +   K   
Sbjct: 333 FIVHINTWRPDSQVH-PPMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDAT 391

Query: 255 CTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GET 79
            T   N  + + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+ 
Sbjct: 392 VTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQA 449

Query: 78  RVFSIYDNSYSIPFEFGSFAGPVP 7
           R++ +      IP   GS+AG  P
Sbjct: 450 RIYDLRRTEAEIPIFLGSYAGATP 473

[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
          Length = 513

 Score = 67.4 bits (163), Expect = 9e-10
 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
 Frame = -2

Query: 600 PTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 421
           PT+ Q    PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +E
Sbjct: 271 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 330

Query: 420 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
           F + I     DSQ  P +         F    +KP+         +P  + +   K    
Sbjct: 331 FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 390

Query: 252 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETR 76
           T   N  + + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+ R
Sbjct: 391 TLASNPLSWLVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 448

Query: 75  VFSIYDNSYSIPFEFGSFAGPVP 7
           ++ +      IP   GS+AG  P
Sbjct: 449 IYDLRRTEAEIPIFLGSYAGATP 471

[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
          Length = 1101

 Score = 67.4 bits (163), Expect = 9e-10
 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
 Frame = -2

Query: 600  PTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 421
            PT+ Q    PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +E
Sbjct: 859  PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 918

Query: 420  FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDC 253
            F + I     DSQ  P +         F    +KP+         +P  + +   K    
Sbjct: 919  FIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 978

Query: 252  TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETR 76
            T   N  + + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+ R
Sbjct: 979  TLASNPLSWLVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQAR 1036

Query: 75   VFSIYDNSYSIPFEFGSFAGPVP 7
            ++ +      IP   GS+AG  P
Sbjct: 1037 IYDLRRTEAEIPIFLGSYAGATP 1059

[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q5L492_TRSV
          Length = 515

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 5/205 (2%)
 Frame = -2

Query: 606 TTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESK 427
           T PT+ Q    PH  +   G  E+  ++  +S++       +  ++PLS P+AP+     
Sbjct: 271 TPPTLRQVLWGPHQIMHGDGQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGS 330

Query: 426 FEFYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGV 259
           +EF + I     DSQ  P +         F    +KP+         +P  + +   K  
Sbjct: 331 YEFIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDA 390

Query: 258 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GE 82
             T   N  + + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+
Sbjct: 391 TVTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQ 448

Query: 81  TRVFSIYDNSYSIPFEFGSFAGPVP 7
            R++ +      IP   GS+AG  P
Sbjct: 449 ARIYDLRRTEAEIPIFLGSYAGATP 473

[20][TOP]
>UniRef100_Q9IV56 Polyprotein n=1 Tax=Olive latent ringspot virus RepID=Q9IV56_9SECO
          Length = 1145

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 11/194 (5%)
 Frame = -2

Query: 570  HCDIVEGGSGELRIQSPF------YSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYI- 412
            H  +  GG+    + SPF      Y +    S G + +V  +  P+AP    +K E+++ 
Sbjct: 908  HITLEGGGNFSFPLDSPFSSAPTRYVSTADSSSGCELYVDTICGPIAPADSVTKLEYFLH 967

Query: 411  --RIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFV- 241
              R+ G  + P+L  +I      G    +     KE  + +P R     I   DCT  + 
Sbjct: 968  FDRLEGTMTAPNLVAEI------GSLWCRVTSFLKE-DVDIPIRARIYDIAAKDCTLELA 1020

Query: 240  -NAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSI 64
             N F+ M A TG   G+  V  + +W  N+EASK+KG++ F        V Y    V S 
Sbjct: 1021 TNPFSKMIAATGFLEGQ--VTLSVSWSTNVEASKIKGHIIF--------VVYDADLVNSF 1070

Query: 63   YDNSYSIPFEFGSF 22
               S  +P   GSF
Sbjct: 1071 DGASTVVPMAKGSF 1084

[21][TOP]
>UniRef100_Q9QRA5 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
           RepID=Q9QRA5_9SECO
          Length = 562

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
 Frame = -2

Query: 606 TTPTIAQTGQMPHCDIVEG-GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVES 430
           T  ++ +  Q PH  + +G G+  L I +PF + A+F  +  +  +  ++ P +P   ++
Sbjct: 269 TDISLEEALQRPHFILKDGQGAFSLPISTPF-AAASFLEDMLRLEIFAIAGPFSPRDNKA 327

Query: 429 KFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCT 250
           KF F      I+    + + I  +Q F W + +    D +++   P+R+ +++    D  
Sbjct: 328 KFHFMCYFDHIELDEQVPRTIAGEQLFNWCVFQNFKID-DWRYEWPARLPDILDDKSDVL 386

Query: 249 NFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLS--FGTGMGTKDVHYGETR 76
              +  +++ ++TG   G+    F + W  N  A  MKG+ S     G G +++    T 
Sbjct: 387 LRQHPLSLLISSTGFFTGR--ASFVFQWGLNANAGNMKGSFSARLAFGKGVEEIEQTSTV 444

Query: 75  VFSIYDNSYSIPFEFGSFAG 16
              +      IP EF +F G
Sbjct: 445 HPLVGACEARIPVEFKTFTG 464