BB939255 ( RCC12639 )

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[1][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T7E3_SOYBN
          Length = 291

 Score =  297 bits (761), Expect = 3e-79
 Identities = 154/187 (82%), Positives = 167/187 (89%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+DAVKQHVEDKVG+ +QKHS+LVREVDVRLS RGGGEFGRGPRTRRCEVTL+TKRHGVV
Sbjct: 81  LTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVV 140

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK  E +  LP   EED
Sbjct: 141 RAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVEQLPV--EED 198

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           EI ++PQ  +EEE I+EVVRTKYFDMPPLTV EAI+QLE VDHDFY FRNEETGEINIVY
Sbjct: 199 EI-LSPQ--EEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVY 255

Query: 29  KRKEGGY 9
           KRKEGGY
Sbjct: 256 KRKEGGY 262

[2][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001984F94
          Length = 298

 Score =  270 bits (691), Expect = 4e-71
 Identities = 135/187 (72%), Positives = 159/187 (85%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVV
Sbjct: 89  LTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELGKGPKIRRCEVTLFTKKHGVV 147

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK  +   PL     E+
Sbjct: 148 RAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPL----VEE 203

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E ++ PQK+D  +LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI+Y
Sbjct: 204 EADVVPQKED-GDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILY 262

Query: 29  KRKEGGY 9
           KRK GGY
Sbjct: 263 KRKAGGY 269

[3][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
          Length = 306

 Score =  270 bits (691), Expect = 4e-71
 Identities = 141/187 (75%), Positives = 156/187 (83%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D VK+HVEDKVG+ +QKHS+LVREVDVRLS RGG E G+GPR RRCEVTL+T RHGVV
Sbjct: 97  LTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGG-ELGKGPRIRRCEVTLFTNRHGVV 155

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AET Y SIDLVSSIIQRKLRKIKEKE+DHGRHMKG NRLK  E   P+P   E D
Sbjct: 156 RAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVRE---PVPQVVEGD 212

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
             E++ Q  + E+ IEEVVRTK+FDMPPLTV EAI+QLE VDHDFY FRNEETGEINIVY
Sbjct: 213 ADEVSQQ--EVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVY 270

Query: 29  KRKEGGY 9
           KRK GGY
Sbjct: 271 KRKAGGY 277

[4][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7QEV5_VITVI
          Length = 230

 Score =  270 bits (691), Expect = 4e-71
 Identities = 135/187 (72%), Positives = 159/187 (85%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVV
Sbjct: 21  LTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELGKGPKIRRCEVTLFTKKHGVV 79

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK  +   PL     E+
Sbjct: 80  RAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPL----VEE 135

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E ++ PQK+D  +LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI+Y
Sbjct: 136 EADVVPQKED-GDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILY 194

Query: 29  KRKEGGY 9
           KRK GGY
Sbjct: 195 KRKAGGY 201

[5][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
           Tax=Ricinus communis RepID=B9SEK8_RICCO
          Length = 311

 Score =  270 bits (690), Expect = 6e-71
 Identities = 136/187 (72%), Positives = 159/187 (85%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D VK+HVEDKVG+ +QKHS+LVREVDVRLS RGG EFG+GP+ RRCEVTL+TK+HGV+
Sbjct: 99  LTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGG-EFGKGPKIRRCEVTLFTKKHGVI 157

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AET Y SIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK  E +   P +D+ D
Sbjct: 158 RAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVAE-PVKDDTD 216

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E++     D++E+ I+EVVRTKYFDMPPLTV EAI+QL+ VDHDFY FRNEETGEINI+Y
Sbjct: 217 EVD-GVLGDEDEDYIDEVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRNEETGEINIIY 275

Query: 29  KRKEGGY 9
           KRK GGY
Sbjct: 276 KRKAGGY 282

[6][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
           thaliana RepID=Q9FLV3_ARATH
          Length = 365

 Score =  268 bits (684), Expect = 3e-70
 Identities = 132/188 (70%), Positives = 161/188 (85%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           LS+ +KQHVE+KVG+ +QKHS+LVREVDVRLS RGG EFG+GPR RRCEVTL+TK+HGVV
Sbjct: 150 LSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGG-EFGKGPRIRRCEVTLFTKKHGVV 208

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AET Y  IDLVS+IIQRKLRKIKEK++DHGRHMKG NRLK  E ++    ED ED
Sbjct: 209 RAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVED 268

Query: 209 EIEIT-PQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
             + +  ++++E++LI+E+VRTK F+MPPLTV EA++QLE+V HDFY F+NEETGEINIV
Sbjct: 269 STDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINIV 328

Query: 32  YKRKEGGY 9
           YKRKEGGY
Sbjct: 329 YKRKEGGY 336

[7][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
          Length = 231

 Score =  264 bits (674), Expect = 4e-69
 Identities = 135/187 (72%), Positives = 155/187 (82%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           LSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G+GPR RRCEVTL+TKRHGVV
Sbjct: 21  LSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELGKGPRIRRCEVTLFTKRHGVV 79

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK  E +  +  ED+ D
Sbjct: 80  RAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDDAD 139

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E+     + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI+Y
Sbjct: 140 EV----SQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINIIY 195

Query: 29  KRKEGGY 9
           KRK GGY
Sbjct: 196 KRKAGGY 202

[8][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PHY3_POPTR
          Length = 306

 Score =  264 bits (674), Expect = 4e-69
 Identities = 135/187 (72%), Positives = 155/187 (82%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           LSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G+GPR RRCEVTL+TKRHGVV
Sbjct: 96  LSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELGKGPRIRRCEVTLFTKRHGVV 154

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK  E +  +  ED+ D
Sbjct: 155 RAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDDAD 214

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E+     + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI+Y
Sbjct: 215 EV----SQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINIIY 270

Query: 29  KRKEGGY 9
           KRK GGY
Sbjct: 271 KRKAGGY 277

[9][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
           RepID=RR30_SPIOL
          Length = 302

 Score =  251 bits (641), Expect = 3e-65
 Identities = 128/190 (67%), Positives = 152/190 (80%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +SD V+ HVEDKVG+ + KHS+LVREVDVRLS RGG +  +GP+ RRCEVTL+TKRHGV+
Sbjct: 86  VSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGG-DLSKGPKLRRCEVTLFTKRHGVI 144

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE---VILPLPSED 219
           RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHMKG NR K  +   V +      
Sbjct: 145 RAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDPEPVRITREEVL 204

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           EE E    P   ++++ IEEVVRTKYFDMPPLT+ EA++QLE VDHDFYAFRNEETG+IN
Sbjct: 205 EEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDIN 264

Query: 38  IVYKRKEGGY 9
           I+YKRKEGGY
Sbjct: 265 ILYKRKEGGY 274

[10][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
           RepID=C9EFD1_SOLTU
          Length = 280

 Score =  248 bits (633), Expect = 2e-64
 Identities = 127/192 (66%), Positives = 154/192 (80%), Gaps = 5/192 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E G+GP+ RRCEVTL+TK+HGV+
Sbjct: 68  LTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPKIRRCEVTLFTKKHGVI 126

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED--- 219
           RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHMKG +RLK  +  + L  ED   
Sbjct: 127 RAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVLLVQEDLET 186

Query: 218 --EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 45
             +E+E+E     D  +  + EVVR K FDMPPL+V EAI+QLE VDHDFY FRNEETGE
Sbjct: 187 LPQEEEVE---DDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGE 243

Query: 44  INIVYKRKEGGY 9
           INIVY+RKEGGY
Sbjct: 244 INIVYRRKEGGY 255

[11][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
           RepID=Q672Q2_SOLLC
          Length = 311

 Score =  242 bits (618), Expect = 1e-62
 Identities = 125/192 (65%), Positives = 151/192 (78%), Gaps = 5/192 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E G+GP+ RRCEVTL+TK+HGV+
Sbjct: 96  LTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPKIRRCEVTLFTKKHGVI 154

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED--- 219
           RAEE  E+ YGSID+VSSIIQRKLRKIKEK++D GRHMKG +RLK  +    L  ED   
Sbjct: 155 RAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPEALLVQEDLET 214

Query: 218 --EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 45
             +E+E+E     D  +  + EVVR K FDMPPL+V EAI+QLE VDHDFY FRNEETGE
Sbjct: 215 LSQEEEVE----DDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGE 270

Query: 44  INIVYKRKEGGY 9
           INIVY+RKEGGY
Sbjct: 271 INIVYRRKEGGY 282

[12][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
           RepID=B6TYP8_MAIZE
          Length = 309

 Score =  221 bits (564), Expect = 2e-56
 Identities = 114/189 (60%), Positives = 146/189 (77%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           LS+ +K+H+EDKVGR + KH +LVREVDVRLS RGG E GRGP+T RCE+TL+TKRHGV+
Sbjct: 83  LSEKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGG-ELGRGPKTSRCEITLFTKRHGVL 141

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP--LPSEDE 216
           RAEE AE+TY SIDL ++I++RKLRKIKEKET+  R   G +     + I P  L    E
Sbjct: 142 RAEEDAESTYASIDLAAAIVKRKLRKIKEKETEVRR---GGDADGVWDEIPPADLLPPAE 198

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
            D++E     +DEE ++ +VVRTK F+MPPLTV EA++QLE VDHDFY FR+E TG++NI
Sbjct: 199 ADDLEAAVGAEDEETVLAKVVRTKVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQVNI 258

Query: 35  VYKRKEGGY 9
           +Y+RKEGGY
Sbjct: 259 LYRRKEGGY 267

[13][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
           bicolor RepID=C5WRX8_SORBI
          Length = 310

 Score =  221 bits (562), Expect = 4e-56
 Identities = 113/189 (59%), Positives = 146/189 (77%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           LSD +K+H+EDKVGR + KH +LVREVDVRLS RGG E GRGP+T RCE+TL++KRHGV+
Sbjct: 83  LSDKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGG-ELGRGPKTSRCEITLFSKRHGVL 141

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED--E 216
           RAEE AE+TY SIDL ++II+RKLRKIKEKET+  R   G     + E  LPL  +D  E
Sbjct: 142 RAEEDAESTYASIDLAAAIIKRKLRKIKEKETEVRRDGDGGAGGAWEEE-LPLLDDDLVE 200

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
            DE+      +DE+ ++ +VVRTK F+MPPLTV EA++QL+ V H+FY FR+E TG++NI
Sbjct: 201 ADELAAAVGAEDEQTVVAKVVRTKVFEMPPLTVEEALEQLDNVGHNFYCFRDEATGQVNI 260

Query: 35  VYKRKEGGY 9
           +Y+RKEGGY
Sbjct: 261 LYRRKEGGY 269

[14][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=B8LMC5_PICSI
          Length = 321

 Score =  216 bits (551), Expect = 7e-55
 Identities = 114/195 (58%), Positives = 146/195 (74%), Gaps = 8/195 (4%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+DAVK ++E+KVG  +QKH+ LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVV
Sbjct: 99  LTDAVKAYIEEKVGIAVQKHANLVREVDVRLSIRGG-EVGKGPKIRRCEVTLFTKKHGVV 157

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AET Y SID+VS II+RKLRKIKEK+  HGR  K   + K  E++  +  + +E 
Sbjct: 158 RAEEEAETIYASIDIVSDIIRRKLRKIKEKDGGHGRPSKMRKQPKLGELLSTVVMDVKET 217

Query: 209 -EIEITPQKDDEE-------ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54
            + E+    D EE       +L +EVVRTKYF+MPP++  EA++QL  VDHDFYAFRN E
Sbjct: 218 RDKELDDLADVEEMRYEKIDDLSDEVVRTKYFEMPPMSPEEALEQLMNVDHDFYAFRNME 277

Query: 53  TGEINIVYKRKEGGY 9
           +GE+N++YKRK GGY
Sbjct: 278 SGEVNVLYKRKHGGY 292

[15][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
          Length = 309

 Score =  213 bits (542), Expect = 8e-54
 Identities = 111/192 (57%), Positives = 147/192 (76%), Gaps = 5/192 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L++ VK+H+E+K GR + KHS LV+EVDVRLS RGG E  RGP+  RCE+TL+TKRHGV+
Sbjct: 92  LNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELSRGPKICRCEITLFTKRHGVI 150

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSEDE 216
           RAEE AE+TY SIDL SSII+RKLRKIKEKETD  RH+KG  P    +   +L    +D 
Sbjct: 151 RAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKGTKPPVSDWPPSLLDNNDDDA 209

Query: 215 E---DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 45
           +    ++E     +DE+ ++ +VVRTK F+MPPL+V EA++QL  VDH+FYAFR+E+TGE
Sbjct: 210 QAQLKDLEEAVGAEDEDTVLTKVVRTKVFEMPPLSVEEAMEQLVNVDHNFYAFRDEKTGE 269

Query: 44  INIVYKRKEGGY 9
           +N++YKRKEGG+
Sbjct: 270 MNVLYKRKEGGF 281

[16][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RWK9_PHYPA
          Length = 221

 Score =  199 bits (505), Expect = 2e-49
 Identities = 106/187 (56%), Positives = 135/187 (72%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+DA+KQ+VE+KVG  +   S LV+EVDVR+S RGG E GRG + +RCEVTL+TK+HGVV
Sbjct: 21  LTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETGRGGKLQRCEVTLFTKKHGVV 79

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AE+ Y SID VS +I RKLRKIKEK+  HGR  K  +  +  EV+    S++  D
Sbjct: 80  RAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKSRHSPRIGEVL----SDEVVD 135

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
              I  +K D  +L +E+VRTKYF+M P+   EA++QL  V HDFYAFRN E+GEINI+Y
Sbjct: 136 LDPILGRKPD--DLPDEIVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILY 193

Query: 29  KRKEGGY 9
           KR  GGY
Sbjct: 194 KRTHGGY 200

[17][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TA00_PHYPA
          Length = 297

 Score =  197 bits (500), Expect = 6e-49
 Identities = 109/187 (58%), Positives = 134/187 (71%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+DA+KQ+VE+KVG  +   S LV+EVDVR+S RGG E GRG R +RCEVTL+TK+HGVV
Sbjct: 99  LTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETGRGERLQRCEVTLFTKKHGVV 157

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AE+ Y SID VS +I RKLRKIKEK+  HGR  K   R+   EV+    S +  D
Sbjct: 158 RAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPAKYSPRI--GEVL----SNEVVD 211

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
              I  +K D  +L +EVVRTKYF+M P+   EA++QL  V HDFYAFRN E+GEINI+Y
Sbjct: 212 LDPILERKPD--DLPDEVVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILY 269

Query: 29  KRKEGGY 9
           KR  GGY
Sbjct: 270 KRTHGGY 276

[18][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6TFU4_SOYBN
          Length = 208

 Score =  188 bits (478), Expect = 2e-46
 Identities = 97/130 (74%), Positives = 111/130 (85%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+DAVK+HVEDKVG+ +QKHS+LVREVDVRLS RGGGEFGRGPRTRRCEVTL+TKRHGVV
Sbjct: 81  LTDAVKRHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVV 140

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK      P       D
Sbjct: 141 RAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKLGS---PWSITYGRD 197

Query: 209 EIEITPQKDD 180
           EI ++P++++
Sbjct: 198 EI-LSPREEE 206

[19][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJW3_9ROSI
          Length = 268

 Score =  178 bits (451), Expect = 3e-43
 Identities = 96/138 (69%), Positives = 110/138 (79%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           LSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G+GPR RRCEVTL+TKRHGVV
Sbjct: 96  LSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELGKGPRIRRCEVTLFTKRHGVV 154

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE AET Y SIDL SSIIQRKLRKIK+KE+DHGRHMKG NRLK  E   P+    E+D
Sbjct: 155 RAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMKGFNRLKVRE---PMHQVVEDD 211

Query: 209 EIEITPQKDDEEELIEEV 156
             E++ Q+D  E+ IEEV
Sbjct: 212 ADEVSQQED--EDYIEEV 227

[20][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
           RepID=C6YXL0_ORYSJ
          Length = 321

 Score =  173 bits (439), Expect = 7e-42
 Identities = 101/192 (52%), Positives = 133/192 (69%), Gaps = 6/192 (3%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L++ VK+H+E+K GR + KHS LV+EVDVRLS RGG E  RGP+  RCE+TL+TKRHGV+
Sbjct: 92  LNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELSRGPKICRCEITLFTKRHGVI 150

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSEDE 216
           RAEE AE+TY SIDL SSII+RKLRKIKEKETD  RH+KG  P    +   +L    +D 
Sbjct: 151 RAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKGTKPPVSDWPPSLLDNNDDDA 209

Query: 215 E---DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF-RNEETG 48
           +    ++E     +DE+ ++  VVRTK F+MPPL+  EA++QL   DH F+A  R +  G
Sbjct: 210 QAQLKDLEEAVGAEDEDTVLTRVVRTKVFEMPPLSGEEAMEQLGNGDHTFHALPRRKNGG 269

Query: 47  EINIVYKRKEGG 12
           +   V  +KEGG
Sbjct: 270 DEPPV--QKEGG 279

[21][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
          Length = 209

 Score =  144 bits (362), Expect = 6e-33
 Identities = 88/191 (46%), Positives = 115/191 (60%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
           ++DA++ +V+ K+ +       L  E+DV LS        R PR    +  EVT+YT   
Sbjct: 12  ITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSV------ARNPRINPKQTAEVTIYTNG- 64

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGPNRLKFSEVILPLPSE 222
            V+RAEE +E  Y SIDLVS  I R+LRK KE+  D H R  + P       V +PL ++
Sbjct: 65  SVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP------VVSVPLVTD 118

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
              D    TP      EL EEVVRTKYF MPP+T+ EA++QLE+VDHDFY FRN ETGEI
Sbjct: 119 LTGDR---TP------ELPEEVVRTKYFAMPPMTLREALEQLELVDHDFYMFRNAETGEI 169

Query: 41  NIVYKRKEGGY 9
           N++Y+R  GGY
Sbjct: 170 NVIYERNHGGY 180

[22][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
           expressed n=1 Tax=Oryza sativa Japonica Group
           RepID=Q10AC8_ORYSJ
          Length = 241

 Score =  140 bits (352), Expect = 9e-32
 Identities = 70/100 (70%), Positives = 84/100 (84%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L++ VK+H+E+K GR + KHS LV+EVDVRLS RGG E  RGP+  RCE+TL+TKRHGV+
Sbjct: 92  LNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELSRGPKICRCEITLFTKRHGVI 150

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 270
           RAEE AE+TY SIDL SSII+RKLRKIKEKETD  RH+KG
Sbjct: 151 RAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG 189

[23][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
          Length = 127

 Score =  140 bits (352), Expect = 9e-32
 Identities = 80/146 (54%), Positives = 97/146 (66%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D VK+HVEDKVG+ +QK S+LVREVD RLS R GGE G+GPR R+C       RHGVV
Sbjct: 3   LTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVR-GGELGKGPRIRKC-------RHGVV 54

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE +ET Y +IDLV SIIQ KLRK+KE E+DHGRHMKG NRLK              D
Sbjct: 55  RAEEDSETIYATIDLVLSIIQSKLRKMKE-ESDHGRHMKGLNRLKI------------RD 101

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDM 132
           + +   +K+D++ L E V    Y  M
Sbjct: 102 DADAVSRKEDDDYLDELVSVASYHQM 127

[24][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
          Length = 213

 Score =  137 bits (346), Expect = 4e-31
 Identities = 82/190 (43%), Positives = 113/190 (59%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRRC-EVTLYTKRH 399
           ++DA++++V  K+ + +     +  EVDV LS        R PR  TR+  EVT+Y    
Sbjct: 12  ITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQAAEVTIYANG- 64

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            V+RAEE +E  Y SIDLV+  I R+LRK KE++ D     +    L  +E I+P     
Sbjct: 65  SVIRAEESSENLYASIDLVADKISRQLRKYKERKQD-----QKTQALPTTETIVP----- 114

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
             + +      D   EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N ETGEIN
Sbjct: 115 --ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEIN 172

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 173 VIYERNHGGY 182

[25][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
           RepID=Q8YSA5_ANASP
          Length = 213

 Score =  136 bits (342), Expect = 1e-30
 Identities = 81/190 (42%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRRC-EVTLYTKRH 399
           ++DA++++V  K+ + +     +  EVDV LS        R PR  TR+  EVT+Y    
Sbjct: 12  ITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQAAEVTIYANG- 64

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            V+RAEE +E  Y SIDLV+  I R+LRK KE++ D     +       +E I+P     
Sbjct: 65  SVIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQAQPT-----TETIVP----- 114

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
             + +      D   EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N ETGEIN
Sbjct: 115 --ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEIN 172

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 173 VIYERNHGGY 182

[26][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
           punctiforme PCC 73102 RepID=B2IVM1_NOSP7
          Length = 214

 Score =  135 bits (341), Expect = 2e-30
 Identities = 82/190 (43%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRRC-EVTLYTKRH 399
           ++DA++++V  K+ +       +  EVDV LS        R PR  TR+  EVT+Y    
Sbjct: 12  ITDAIREYVHQKIEKAASHFQSITNEVDVHLSV------ARNPRINTRQAAEVTIYANG- 64

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            V+RAEE +E  Y SIDLV+  I R+LRK KE+  D  +    P  +  +E ++P    D
Sbjct: 65  SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDQ-KTQSQPTEVVVAESVVPDLIGD 123

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
                  TP      EL  EVVRTKYF MPP+T+ EA++QL++V HDFY FRN ETGEIN
Sbjct: 124 R------TP------ELPNEVVRTKYFSMPPMTLAEALEQLQLVGHDFYMFRNSETGEIN 171

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 172 VIYERNHGGY 181

[27][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
           RepID=Q8DKM6_THEEB
          Length = 209

 Score =  135 bits (340), Expect = 2e-30
 Identities = 81/187 (43%), Positives = 109/187 (58%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++D ++ ++  K+ R       ++ EVDV LS          P+ +  EVT++     V+
Sbjct: 12  ITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRS--TAPK-QTAEVTVFVNG-SVI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE +E  Y SIDLV+  I RKLRK+KEK  D  R  K  N +   EV+  L  +    
Sbjct: 68  RAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR-AKDTNSVVEPEVVTDLVGDR--- 123

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
               TPQ      L E+VVR KYF MPP+T+ EA++ LEMVDHDFY FRN +TGEIN+VY
Sbjct: 124 ----TPQ------LPEQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFRNRDTGEINVVY 173

Query: 29  KRKEGGY 9
           +R  GGY
Sbjct: 174 ERNHGGY 180

[28][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           JA-3-3Ab RepID=Q2JS19_SYNJA
          Length = 191

 Score =  135 bits (339), Expect = 3e-30
 Identities = 83/191 (43%), Positives = 111/191 (58%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRRCEVTLYTKRH 399
           ++DA++ +V++K+ R ++  + +  EVDV LS        R PR    +  EVT+Y    
Sbjct: 13  ITDAIRSYVQEKIERAVKHFAQITSEVDVNLSV------ARNPRISANQSAEVTVYANGT 66

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKFSEVILPLPSE 222
            V+RAEE +E  Y SID V+  + RKLRK KE+   H  RH       K S  +   P  
Sbjct: 67  -VIRAEESSENLYASIDRVADKLARKLRKYKERNGVHRIRHSP-----KTSVAVAQQPLT 120

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
           D  +        + + EL  EVVRTKYF MPP+TV EA+ QLE+VDHDFY FRN E GEI
Sbjct: 121 DPLNT-------ERQAELPPEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEI 173

Query: 41  NIVYKRKEGGY 9
           N++Y RK GGY
Sbjct: 174 NVIYVRKHGGY 184

[29][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
           RepID=B0CDL4_ACAM1
          Length = 212

 Score =  135 bits (339), Expect = 3e-30
 Identities = 78/191 (40%), Positives = 116/191 (60%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
           ++DA++++V  K+ +    +  L  E+DV LS        R PR    +  EVTL+    
Sbjct: 12  ITDAIREYVHQKIEKAANHYQNLTTEIDVHLSV------ARNPRITTKQTAEVTLFVNG- 64

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            V+RAEE +E  Y SIDLV+  I R+LRK KEK     R  KGPN+       + L + +
Sbjct: 65  SVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNKGSNRSKAVALQTPE 119

Query: 218 EEDEI-EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
           E+  I ++T  +D   EL EEVVR KYF + P++V +A++QL++VDHDFY F N +TG++
Sbjct: 120 EQPLIGDLT--RDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDFYVFENADTGQL 177

Query: 41  NIVYKRKEGGY 9
           N++Y+R  GGY
Sbjct: 178 NVIYERNHGGY 188

[30][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
          Length = 190

 Score =  133 bits (334), Expect = 1e-29
 Identities = 82/191 (42%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRRCEVTLYTKRH 399
           ++DA++ +V++K+ R +   + +  EVDV LS        R PR   ++  EVT+Y    
Sbjct: 13  ITDAIRSYVQEKIERAVSHFAQITSEVDVNLSV------ARNPRISASQSAEVTVYANGT 66

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKFSEVILPLPSE 222
            V+RAEE +E  Y SID V+  + RKLRK KE+   H  RH       K S  +   P  
Sbjct: 67  -VIRAEESSENLYASIDRVADKLARKLRKYKERNGIHRVRHTP-----KTSVAVAQQPVT 120

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
           D  +        + + EL  EVVRTKYF MPP+TV EA+ QLE+VDHDFY FRN E GEI
Sbjct: 121 DPLNT-------ERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEI 173

Query: 41  NIVYKRKEGGY 9
           N++Y R  GGY
Sbjct: 174 NVIYVRNHGGY 184

[31][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
           azollae' 0708 RepID=B9YPU1_ANAAZ
          Length = 214

 Score =  132 bits (333), Expect = 1e-29
 Identities = 80/190 (42%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
           ++DA++++V  K+ R +     +  EV+V LS        R PR    +  EVT+Y    
Sbjct: 12  ITDAIREYVHQKIERAVNHFQSITNEVNVHLSV------ARNPRISTKQAAEVTIYANG- 64

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            V+RAEE +E  Y SIDLV+  I R+LRK KE+  DH       N    +E +      D
Sbjct: 65  SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVVAEPVADSLIGD 124

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
                  TP      EL  EVVRTKYF MPP+T+ EA +QL++V HDFY FRN ETGEIN
Sbjct: 125 R------TP------ELPGEVVRTKYFPMPPMTLAEAQEQLQLVGHDFYMFRNAETGEIN 172

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 173 VIYERNHGGY 182

[32][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
          Length = 213

 Score =  132 bits (331), Expect = 2e-29
 Identities = 78/190 (41%), Positives = 108/190 (56%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
           ++DA++++V  K+ + +     +  EVDV LS        R PR    +  EVT++    
Sbjct: 12  ITDAIREYVHQKIEKAVSHFQNITNEVDVHLSV------ARNPRITTKQAAEVTIFANG- 64

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            V+RAEE +E  Y SIDLV+  I R+LRK KE+  D   +    N     +V++P P   
Sbjct: 65  SVIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTN-----QVLVPEP--- 116

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
               +      D   EL  EVVRTKYF MPP+TV EA +QL++V HDFY F N ETGEIN
Sbjct: 117 ----VAADLIGDRTPELPNEVVRTKYFSMPPMTVAEATEQLQLVGHDFYMFHNAETGEIN 172

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 173 VIYERNHGGY 182

[33][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
           RepID=A8YEZ8_MICAE
          Length = 199

 Score =  130 bits (328), Expect = 5e-29
 Identities = 76/187 (40%), Positives = 111/187 (59%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A+  +VE K+ + ++  + +  +VDV LS        R P   + EVT+Y     V+
Sbjct: 12  VTEAIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHKAEVTVYANGT-VI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RA+E +E  Y SIDLVS  I R+LRK KE+  DH  H    + +K SEV+   P +D   
Sbjct: 68  RAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTH----STVKTSEVVQEKPLDDNLI 123

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                   D   EL  EVVR KYF MPP+T+ EA+ QL++VDHDF+ F N++T EIN++Y
Sbjct: 124 G-------DRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFFMFCNKDTNEINVIY 176

Query: 29  KRKEGGY 9
           +R  GG+
Sbjct: 177 QRNHGGF 183

[34][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Microcoleus chthonoplastes PCC 7420
           RepID=B4VJW0_9CYAN
          Length = 215

 Score =  129 bits (323), Expect = 2e-28
 Identities = 80/190 (42%), Positives = 110/190 (57%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
           ++D+++++V  K+ + +     +  EVDV LS        R PR    +  EVT+Y  + 
Sbjct: 12  ITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSV------ARNPRINTKQTAEVTIYANKT 65

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            V+RA+E +E  Y SIDLV+  IQR+LRK KEK+       K   + K   VI   P   
Sbjct: 66  -VIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ-----QKKTQTQPKTGAVIHEAPVV- 118

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
            ED I      D   EL  EVVR KYF MPP+T+ EA +QL++VDHDFY FRN +T EIN
Sbjct: 119 -EDLIG-----DRTPELPTEVVRMKYFAMPPMTIEEATEQLQLVDHDFYMFRNAKTDEIN 172

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 173 VIYERNHGGY 182

[35][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
           RepID=A0YIH4_9CYAN
          Length = 212

 Score =  129 bits (323), Expect = 2e-28
 Identities = 80/191 (41%), Positives = 114/191 (59%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
           +++A+ ++V  K+ + +  +  L  EVDV LS        R PR    +  EVT+Y    
Sbjct: 12  ITEAIHEYVHQKITKAVSHYQQLTNEVDVHLS------IARNPRINPKQTAEVTIYANGT 65

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            V+RA+E +E  Y SIDLV+  I R+LRK K+K    G+H+  P   K +EV+   P   
Sbjct: 66  -VIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP---KLAEVVENQPVI- 118

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
            ED I      D + EL  EVVRTKYF MPP+ + +A++QL++VDHDFY F N +TGE+N
Sbjct: 119 -EDLIG-----DRQPELPPEVVRTKYFAMPPMNLQDALEQLQLVDHDFYVFCNADTGELN 172

Query: 38  IVYKR-KEGGY 9
           ++YKR   GGY
Sbjct: 173 VIYKRVNHGGY 183

[36][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
          Length = 212

 Score =  128 bits (322), Expect = 3e-28
 Identities = 80/191 (41%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
           ++DA+ ++V+ K+ + +     L  EVDV LS        R PR    +  EVT+Y    
Sbjct: 12  ITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSV------ARNPRINPRQTAEVTIYANGT 65

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            V+RA+E +E  Y SIDLV+  I R+LRK KEK     R  K     K  EV+   P  D
Sbjct: 66  -VIRAQESSENLYASIDLVADKIARQLRKYKEK-----RMAKQYQLPKTGEVVAQKPIVD 119

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           +          D   +L EEVVRTKYF MPP+++ EA++QL+++DHDFY FRN ET EIN
Sbjct: 120 DLIG-------DRTVKLPEEVVRTKYFAMPPMSIQEALEQLQLIDHDFYMFRNAETDEIN 172

Query: 38  IVYKRK-EGGY 9
           ++Y+R   GGY
Sbjct: 173 VIYQRSHHGGY 183

[37][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8J8B2_CHLRE
          Length = 286

 Score =  128 bits (322), Expect = 3e-28
 Identities = 82/206 (39%), Positives = 113/206 (54%), Gaps = 19/206 (9%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA+K +VE+KV + +   S+ ++EVDV LS RGG     G + ++ EVT+YT R+GVV
Sbjct: 81  VTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVV 140

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R E+     Y +IDLV   I+ KL+KIKEK    G     P R        P    DEED
Sbjct: 141 RVEDAENNLYAAIDLVCDKIRAKLQKIKEKAISRG---AWPGRAG------PKEDVDEED 191

Query: 209 ------EIEITPQKDDEEELIE------------EVVRTKYFDM-PPLTVFEAIDQLEMV 87
                 E+++  Q  D+EE ++             V+R+K   +  P+TV EAID LE V
Sbjct: 192 FQEYLKEVKMDTQLFDKEEQLQRQFAELNRIYPANVMRSKTVVLADPITVEEAIDALEAV 251

Query: 86  DHDFYAFRNEETGEINIVYKRKEGGY 9
            H FY FR   T  + IVYKR+ GGY
Sbjct: 252 GHSFYVFREMTTDTVQIVYKRESGGY 277

[38][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Cyanothece RepID=C7QW97_CYAP0
          Length = 205

 Score =  127 bits (320), Expect = 5e-28
 Identities = 75/187 (40%), Positives = 109/187 (58%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++++  +V++K+ + ++    +  +VDV LS        R     + EVT+Y     V+
Sbjct: 19  VTESIHDYVQEKLEKAVKHFQSITTKVDVHLSVARNA---RITNKHKAEVTVYANGT-VI 74

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RA+E +E+ Y SIDLVS  I R+LRK KEK  +     K PN +K  EV      E +  
Sbjct: 75  RAQEGSESLYASIDLVSDKIARQLRKYKEKLNNK----KAPNPVKVGEVTTATAIEGDLI 130

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                   D   EL  EV+R KYF MPP+T+ EA+ QLE+VDHDFY FRN++T EIN++Y
Sbjct: 131 G-------DRTPELPAEVIRMKYFAMPPMTIDEALHQLELVDHDFYMFRNKDTDEINVIY 183

Query: 29  KRKEGGY 9
           +R  GGY
Sbjct: 184 QRNHGGY 190

[39][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
           NIES-843 RepID=B0JSS1_MICAN
          Length = 199

 Score =  127 bits (319), Expect = 6e-28
 Identities = 75/187 (40%), Positives = 111/187 (59%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++ +  +VE K+ + ++  + +  +VDV LS        R P   R EVT+Y     V+
Sbjct: 12  VTEPIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHRAEVTVYANGT-VI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RA+E +E  Y SIDLVS  I R+LRK KE+  DH  +      +K SEV+       +E 
Sbjct: 68  RAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTNAP----VKTSEVV-------QEK 116

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            ++ +   D   EL  EVVR KYF MPP+T+ EA+ QL++VDHDFY F N++T EIN++Y
Sbjct: 117 PLDGSLIGDRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFYMFCNKDTNEINVIY 176

Query: 29  KRKEGGY 9
           +R  GG+
Sbjct: 177 QRNHGGF 183

[40][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
           6803 RepID=LRTA_SYNY3
          Length = 191

 Score =  127 bits (319), Expect = 6e-28
 Identities = 75/187 (40%), Positives = 109/187 (58%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A+  +VE+KV R ++    L  +VDV LS        R     + EVT+Y     V+
Sbjct: 12  VTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSVARNA---RITNKHKAEVTVYANGT-VI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RA+E +E  Y SIDLV+  I R+LRK KE+  D     K    +K SE++       E+ 
Sbjct: 68  RAQEGSENLYASIDLVADKIARQLRKYKERIQD-----KQHGNVKTSEIV-------EDK 115

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            +E     D   EL  EV+R KYF MPP+ + +A++QL++VDHDFY FRN++T EIN++Y
Sbjct: 116 PVEENLIGDRAPELPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFRNKDTDEINVIY 175

Query: 29  KRKEGGY 9
            R  GGY
Sbjct: 176 IRNHGGY 182

[41][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
          Length = 199

 Score =  127 bits (318), Expect = 8e-28
 Identities = 72/187 (38%), Positives = 112/187 (59%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A+  +V+ K+ + ++    L  +VDV LS     +  R     + EVT+Y     V+
Sbjct: 12  VTEAIHDYVQQKLEKAVKHFQTLTTKVDVHLSV---AKNARIQNKHKAEVTVYANGT-VI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RA+E +E  Y SIDLVS  I R+LRK KE++ +   H    + +K  EV+       +++
Sbjct: 68  RAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH----SPVKAGEVV-------QQE 116

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            IE     D + EL  EVVR KYF MPP+++ EA++QL++VDHDF+ FRN +T EIN++Y
Sbjct: 117 TIEENLIGDRQPELPPEVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFRNRDTNEINVIY 176

Query: 29  KRKEGGY 9
            R  GG+
Sbjct: 177 IRNHGGF 183

[42][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
           RepID=B1WZE1_CYAA5
          Length = 201

 Score =  125 bits (314), Expect = 2e-27
 Identities = 76/187 (40%), Positives = 109/187 (58%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++++  +V  K+ + ++ +  L  +VDV LS     +  R     + EVT+Y     V+
Sbjct: 14  VTESINDYVTQKLEKAVKHYQTLTTKVDVHLSV---AKNARITNKHKAEVTVYANGT-VI 69

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RA+E +E  Y SIDLVS  I R+LRK KEK  +H    K  + +K  EV+        E 
Sbjct: 70  RAQEGSENLYASIDLVSDKIARQLRKYKEKINNH----KPQSSVKNPEVL-------PER 118

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           EIE     D E  L  EV+R KYF MPP+++ EA  QLE+VDHDFY FRN++T EIN++Y
Sbjct: 119 EIEKDLIGDREAALPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEINVIY 178

Query: 29  KRKEGGY 9
            R  GG+
Sbjct: 179 MRNHGGF 185

[43][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
          Length = 284

 Score =  124 bits (311), Expect = 5e-27
 Identities = 72/191 (37%), Positives = 117/191 (61%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGR-GPRTRRCEVTLYTKRHG 396
           ++D+++++ E+K+ + +     + VREVDVR S+RGG +    G   ++ EVT+YT R+G
Sbjct: 91  ITDSIREYAEEKINKAVAHFDQHDVREVDVRCSSRGGADKKTPGGALQKTEVTVYT-RNG 149

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRLKFSEVILPLPSED 219
           ++R+EE A+  Y SID VS  ++RKLRK+KEK+ +   +H K   + +   ++  + + D
Sbjct: 150 IIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKAQTDAIVEEMQAAD 209

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG-EI 42
           E           DE    +EVVR K+  +   TV+EA +++E + H F+AFRN   G E+
Sbjct: 210 E--------ALADESMDYDEVVREKFHPVRKCTVYEAAEEMENLGHTFFAFRNVAQGNEV 261

Query: 41  NIVYKRKEGGY 9
           N+VYKR  GGY
Sbjct: 262 NVVYKRDAGGY 272

[44][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
          Length = 199

 Score =  123 bits (309), Expect = 8e-27
 Identities = 71/187 (37%), Positives = 110/187 (58%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A+  +V++K+ + ++    +  +VDV LS     + GR     + EVT+Y     V+
Sbjct: 12  VTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSV---AKNGRVQNKHKAEVTVYANG-AVI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RA+E +E  Y SIDLVS  I R+LRK KE+  +     K  + +K  +V+       ++ 
Sbjct: 68  RAQEGSENLYASIDLVSDKIARQLRKYKERRLEQ----KAYSPVKTGDVV-------QDQ 116

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            +E     D + EL  EVVR KYF MP +++ EA++QL++VDHDFY FRN  T EIN++Y
Sbjct: 117 PVEGNLIGDRQPELPPEVVRMKYFAMPLMSIEEALEQLQLVDHDFYMFRNRNTNEINVIY 176

Query: 29  KRKEGGY 9
            R  GGY
Sbjct: 177 IRNHGGY 183

[45][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
          Length = 199

 Score =  122 bits (307), Expect = 1e-26
 Identities = 73/187 (39%), Positives = 111/187 (59%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++++  +V+ K+ + ++ +     +VDV LS     +  R     + EVT+Y     V+
Sbjct: 12  VTESINDYVKQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAEVTVYANGT-VI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RA+E +E  Y SIDLVS  I R+LRK KEK ++H    K  +  K  EV   LP ++  +
Sbjct: 68  RAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH----KPQSSAKLPEV---LPEKEVSE 120

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           ++      D + EL  EV+R KYF MP +++ EA  QLE+VDHDFY FRN+ET EIN++Y
Sbjct: 121 DLI----GDRQAELPPEVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFRNQETEEINVIY 176

Query: 29  KRKEGGY 9
            R  GG+
Sbjct: 177 MRNHGGF 183

[46][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
           RepID=A3IRI7_9CHRO
          Length = 199

 Score =  122 bits (307), Expect = 1e-26
 Identities = 76/189 (40%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++++  +V  K+ + ++ +     +VDV LS     +  R     + EVT+Y     V+
Sbjct: 12  VTESINDYVTQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAEVTVYANGT-VI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH--MKGPNRLKFSEVILPLPSEDE 216
           RA+E +E  Y SIDLVS  I R+LRK KEK  +H     +K P+ L  +EV        +
Sbjct: 68  RAQEGSENLYASIDLVSDKIARQLRKYKEKINNHKPQSSVKSPDVLPETEV--------K 119

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
           ED I      D E EL  EV+R KYF MPP+++ EA  QLE+VDHDFY FRN++T EIN+
Sbjct: 120 EDLIG-----DREVELPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEINV 174

Query: 35  VYKRKEGGY 9
           +Y R  GG+
Sbjct: 175 IYMRNHGGF 183

[47][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
          Length = 215

 Score =  122 bits (306), Expect = 2e-26
 Identities = 76/191 (39%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
           ++D++ ++V  K+ + +     L  EVDV LS        R PR    +  EVT+Y    
Sbjct: 12  ITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSV------ARNPRINPKQTAEVTIYANGT 65

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            V+RA+E +E  Y SIDLV+  I R+LRK KEK        K  + ++   V+  L    
Sbjct: 66  -VIRAQESSENLYASIDLVADKIARQLRKYKEKRQSKVNKTKTVDLIESQPVVENLIG-- 122

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
                      D + EL  EVVRTKYF MP +TV EA++QL+++DHDFY F N  TGEIN
Sbjct: 123 -----------DRQAELPSEVVRTKYFPMPSMTVEEALEQLQLIDHDFYMFSNGVTGEIN 171

Query: 38  IVYKR-KEGGY 9
           ++YKR   GGY
Sbjct: 172 VIYKRYHHGGY 182

[48][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
          Length = 224

 Score =  121 bits (304), Expect = 3e-26
 Identities = 72/188 (38%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ HV  K+ +       L+ +VDV LS +        P+ +  EVT++   + VV
Sbjct: 12  ITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQNNPRIA--PK-QTAEVTVFLN-NVVV 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED-EE 213
           RAEE +E+ Y SID+V+  + R+LRK KEK  D       P     ++V   + + D   
Sbjct: 68  RAEESSESLYASIDMVTDKLTRQLRKYKEKRRDQDHATVRP-----TDVDATINAPDITS 122

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              +I+   + + +L + VVR+KYF MPP+TV  A++ LE+V HDFY FRN ETGEIN++
Sbjct: 123 HNADISEVLNHQPKLPDTVVRSKYFAMPPMTVQTALENLELVGHDFYMFRNVETGEINVI 182

Query: 32  YKRKEGGY 9
           Y+R   GY
Sbjct: 183 YERNHKGY 190

[49][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GUZ2_SYNR3
          Length = 187

 Score =  121 bits (303), Expect = 4e-26
 Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           ++ A++ + E K+ R +   + +V+E DV LS        R PR   +  EVTL+     
Sbjct: 12  VTPALRDYTETKLSRAVSHFNGMVQEADVHLSV------ARNPRVPQQTAEVTLFASGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RA+E ++  Y SIDLV+  + R+L++ K++   HG H                   D 
Sbjct: 65  VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH------------------SDL 106

Query: 215 EDEIEITPQKDD-----EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEET 51
           + E E+ P + D       EL   VVR KYF MPP++V EAI QLE++DHDFY FRN + 
Sbjct: 107 QAEPEVMPLQGDMLQGRHAELPAPVVRRKYFAMPPMSVEEAIHQLEVIDHDFYVFRNADN 166

Query: 50  GEINIVYKRKEGGY 9
           GE+ +VY+R  GGY
Sbjct: 167 GELQVVYQRNHGGY 180

[50][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
           RepID=LRTA_SYNP2
          Length = 193

 Score =  120 bits (301), Expect = 7e-26
 Identities = 74/187 (39%), Positives = 104/187 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++++  +VE K+ +  +       +VDV LS        R     + EVT+Y     V+
Sbjct: 12  VTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNA---RITDKHKAEVTVYANGT-VI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RA+E +E  Y SIDLVS  I R+LRK KEK      H++     K SEV+        ED
Sbjct: 68  RAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQE----KTSEVL-------PED 116

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            +      D   EL  EVVR KYF MPP+T+ EA++QL++VDHDFY F N++T  IN++Y
Sbjct: 117 PVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIY 176

Query: 29  KRKEGGY 9
            R  GGY
Sbjct: 177 IRNHGGY 183

[51][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
          Length = 207

 Score =  118 bits (295), Expect = 4e-25
 Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 1/185 (0%)
 Frame = -2

Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381
           A+  +V+ K+ + +  +   + E+DV LS     +  +    +  EVT+Y     V+RAE
Sbjct: 15  AIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAEVTIYANGT-VIRAE 70

Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIE 201
           E  E  Y SIDLVS  I R+L+K KEK  D     KG  +L  +E      ++   D   
Sbjct: 71  ECNENLYASIDLVSDKITRQLKKYKEKLRDR----KG--QLSTAET-----ADQLSDGAL 119

Query: 200 ITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24
           +T   +  + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN  TGEIN++Y+R
Sbjct: 120 VTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEINVIYER 179

Query: 23  KEGGY 9
             GGY
Sbjct: 180 NHGGY 184

[52][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           CC9311 RepID=Q0ICJ8_SYNS3
          Length = 191

 Score =  117 bits (294), Expect = 5e-25
 Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           ++ A++++ E K+ R I     LV+E DV LS        R PR   +  EVT++     
Sbjct: 12  VTPALREYTETKLERAIHHFDDLVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DHG H   P       ++   P+ED 
Sbjct: 65  VIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG-HRTTPTAAN-DVLLTERPTEDS 122

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
             E         E +L    VR KYF MP +++ EA  QLE++DHDFY FR++E+GE+ +
Sbjct: 123 LLE-------GKEAQLPSPGVRRKYFAMPAMSLEEARHQLELIDHDFYLFRDKESGELQV 175

Query: 35  VYKRKEGGY 9
           +Y R  GG+
Sbjct: 176 IYHRNHGGF 184

[53][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
           RepID=A5GJ89_SYNPW
          Length = 195

 Score =  117 bits (292), Expect = 8e-25
 Identities = 71/190 (37%), Positives = 109/190 (57%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           ++ A++ + E K+ R I     LV+E DV LS        R PR   +  EVT++     
Sbjct: 12  VTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RA+E +E  Y SIDLV+S + R+LR+ K++ +DH  H  G    + SE   P      
Sbjct: 65  VIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH-HHSHGH---RASET--PTTESVL 118

Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           +DE  +    D +E +L    VR KYF MPP+T+ +A  QL+++DHDFY FR+  +G++ 
Sbjct: 119 DDEAIVESLLDGKEVQLPSPGVRRKYFSMPPMTLEQARQQLDLIDHDFYLFRDSASGDLQ 178

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 179 VIYRRNHGGY 188

[54][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
           PCC 6301 RepID=Q5N179_SYNP6
          Length = 207

 Score =  116 bits (291), Expect = 1e-24
 Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 1/185 (0%)
 Frame = -2

Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381
           A+  +V+ K+ + +  +   + E+DV LS     +  +    +  EVT+Y     V+RAE
Sbjct: 15  AIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAEVTIYANGT-VIRAE 70

Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIE 201
           E  E  Y SIDLVS  I R+L+K KE+  D     KG  +L  +E      ++   D   
Sbjct: 71  ECNENLYASIDLVSDKITRQLKKYKEELRDR----KG--QLSTAET-----ADQLSDGAL 119

Query: 200 ITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24
           +T   +  + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN  TGEIN++Y+R
Sbjct: 120 VTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEINVIYER 179

Query: 23  KEGGY 9
             GGY
Sbjct: 180 NHGGY 184

[55][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
           RepID=A4CWK2_SYNPV
          Length = 195

 Score =  116 bits (291), Expect = 1e-24
 Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           ++ A++ + E K+ R I     LV+E DV LS        R PR   +  EVT++     
Sbjct: 12  VTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RA+E +E  Y SIDLV+S + R+LR+ K++ +DH  H  G    K SE   P      
Sbjct: 65  VIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH-HHSHGH---KASET--PTTEAVL 118

Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           ++E  +    D +E +L    VR KYF MPP+T+ +A  QL+++DHDFY FR+ ++GE+ 
Sbjct: 119 DNEAVVESLLDGKEVQLPSPGVRRKYFAMPPMTLEQARQQLDLIDHDFYVFRDSDSGELQ 178

Query: 38  IVYKRKEGGY 9
           ++Y R  GGY
Sbjct: 179 VIYHRNHGGY 188

[56][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
          Length = 195

 Score =  115 bits (289), Expect = 2e-24
 Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           ++ A++++   K+ R        +RE DV LS        R PR   +  EVT++     
Sbjct: 12  ITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE-D 219
           V+RA+E +E  Y SIDLV   + R+LRK KE+  DH  H  G      S  + P   E  
Sbjct: 65  VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HSASLTPSTEEVS 118

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           +E  +E +     E +L E  VR KYF MPP+T+ +A  QL+++DHDFY FR+ +TG++ 
Sbjct: 119 DESAVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFRDSKTGDLQ 178

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 179 VIYRRNHGGY 188

[57][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
           RepID=B5IMZ9_9CHRO
          Length = 195

 Score =  115 bits (289), Expect = 2e-24
 Identities = 73/193 (37%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR--CEVTLYTKRHG 396
           ++ A++++ E K+ R I     +V+E DV LS        R PR  +   EVT++     
Sbjct: 12  VTPAIREYTETKLTRAITHFEGMVKEADVHLSV------ARNPRVPQQIAEVTMFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE----VILPLP 228
           V+RA+EH++  Y SIDLV+S + R+L + KE+   H RH    +R    E      LP P
Sbjct: 65  VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRSARDEEAGAASLPPP 122

Query: 227 SEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 48
                D          E EL    VR KYF MPP+++ EA+ QLE++DHDFY FR  E+G
Sbjct: 123 GSSLTD--------GKEPELPSRGVRRKYFAMPPMSLDEALHQLELIDHDFYVFREAESG 174

Query: 47  EINIVYKRKEGGY 9
           +I +VY R  GG+
Sbjct: 175 QIQVVYHRNHGGF 187

[58][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
           AS9601 RepID=A2BPM8_PROMS
          Length = 194

 Score =  115 bits (287), Expect = 3e-24
 Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A+K++ E K+ +    +  +V+E D+ LS        + PR   +  EVT++     
Sbjct: 12  LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222
           V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L       P+ S 
Sbjct: 65  VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL-------PIESM 117

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
           +     +   ++  E  L E  ++ KYF+M P++  EA  QL+++DHDFY FRN++  E+
Sbjct: 118 ESNFLDKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNEL 177

Query: 41  NIVYKRKEGGY 9
            ++YKR  GGY
Sbjct: 178 QVIYKRNHGGY 188

[59][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
           RS9917 RepID=A3ZA02_9SYNE
          Length = 195

 Score =  115 bits (287), Expect = 3e-24
 Identities = 68/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A++ + + K+ R +Q    +V+E DV LS        R PR   +  EVT++     
Sbjct: 12  LTPALRDYTQSKLERAVQHFDDMVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH  H    +R   +    P  +  +
Sbjct: 65  VIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH--HHSNGHRASETP---PTDAIAD 119

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
              I+ +     E +L +  VR KYF MPP+++ EA  QL+++DHDFY FR+  TG++ +
Sbjct: 120 AAPIDGSLLDGKEVQLPDPGVRRKYFAMPPMSLEEARHQLDVIDHDFYLFRDASTGDLQV 179

Query: 35  VYKRKEGGY 9
           +Y+R  GGY
Sbjct: 180 IYRRNHGGY 188

[60][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9301 RepID=A3PBB8_PROM0
          Length = 194

 Score =  114 bits (286), Expect = 4e-24
 Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A+K++ E K+ +    +  +V+E D+ LS        + PR   +  EVT++     
Sbjct: 12  LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222
           V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L       P+ S 
Sbjct: 65  VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL-------PIESM 117

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
           +     +   ++  E  L E  ++ KYF+M P++  EA  QL+++DHDFY FRN++  E+
Sbjct: 118 ESNFLDKAFFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNEL 177

Query: 41  NIVYKRKEGGY 9
            ++YKR  GGY
Sbjct: 178 QVIYKRNHGGY 188

[61][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9303 RepID=A2CBL6_PROM3
          Length = 195

 Score =  114 bits (286), Expect = 4e-24
 Identities = 69/191 (36%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A++++ + K+ R IQ    +V+E DV LS        R P    +  EVT++     
Sbjct: 12  LTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSE 222
           V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH  H  G   +    +E ++     
Sbjct: 65  VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTEAVI----- 118

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
            +E  I+ +     E  L    VR KYF MPP++V +A  QL+++DHDFY FR +E+G++
Sbjct: 119 -DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARHQLDLIDHDFYLFREQESGQL 177

Query: 41  NIVYKRKEGGY 9
            ++Y+R  GGY
Sbjct: 178 QVIYRRNHGGY 188

[62][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9515 RepID=A2BV60_PROM5
          Length = 194

 Score =  114 bits (285), Expect = 5e-24
 Identities = 67/190 (35%), Positives = 108/190 (56%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A+K++ E K+ +    +  +V+E D+ LS        + PR   +  EVT++     
Sbjct: 12  LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRLSYQTAEVTIFASGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           ++RAEE  E  Y SIDLVS+ + RKLRK KE+   +  +    N+  F+       + + 
Sbjct: 65  IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHYKNLNYNLEKNKHSFTN------TNEH 118

Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
            D I+     D  E +L E  ++ KYF+M P+++ EA  QL+++DHDFY FRN++  E+ 
Sbjct: 119 LDSIDKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFYVFRNKKNNELQ 178

Query: 38  IVYKRKEGGY 9
           ++YKRK GGY
Sbjct: 179 VIYKRKHGGY 188

[63][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
           str. MIT 9313 RepID=Q7V8W0_PROMM
          Length = 195

 Score =  114 bits (284), Expect = 7e-24
 Identities = 69/191 (36%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A++++ + K+ R IQ    +V+E DV LS        R P    +  EVT++     
Sbjct: 12  LTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSE 222
           V+RA+E +E  Y SIDLV+S + R+LR+ KE+ +DH  H  G   +    +E ++     
Sbjct: 65  VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTEAVI----- 118

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
            +E  I+ +     E  L    VR KYF MPP++V +A  QL+++DHDFY FR +E+G++
Sbjct: 119 -DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARYQLDLIDHDFYLFREQESGQL 177

Query: 41  NIVYKRKEGGY 9
            ++Y+R  GGY
Sbjct: 178 QVIYRRNHGGY 188

[64][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
           marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
          Length = 194

 Score =  113 bits (282), Expect = 1e-23
 Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 6/193 (3%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A+K++ E K+ +    +  +V+E D+ LS        + PR   +  EVT++     
Sbjct: 12  LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222
           V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H    K  N+  F       PSE
Sbjct: 65  VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK--NKESF-------PSE 115

Query: 221 DEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 48
           + E     E   +   E  L E  ++ KYF+M P++  EA  QL+++DHDFY FRN++  
Sbjct: 116 NTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNN 175

Query: 47  EINIVYKRKEGGY 9
           ++ ++YKR  GGY
Sbjct: 176 QLQVIYKRNHGGY 188

[65][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
          Length = 187

 Score =  112 bits (281), Expect = 1e-23
 Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR---CEVTLYTKRH 399
           +++ ++ +V  K+ +V      L   VDV LS        R PR  R    EVT+     
Sbjct: 12  VTEPIRDYVSSKLDKVFAHFDQLTMGVDVYLSV------ARNPRISRSHSAEVTVQASGT 65

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            ++RAEE  E  Y SIDLV+  + R++RK KE+     +   G      ++  + LP+ D
Sbjct: 66  -IIRAEEETENLYASIDLVADKLHRQMRKYKERMQKKPKPKTG--LAVANQAPISLPNGD 122

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           E+              L +EVVRTKYF MPP++  EA+D L +VDHDF+ FRN E+GEIN
Sbjct: 123 EK-----------ATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFFVFRNAESGEIN 171

Query: 38  IVYKRKEGGY 9
           ++Y R  GGY
Sbjct: 172 VLYARNHGGY 181

[66][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
          Length = 195

 Score =  112 bits (280), Expect = 2e-23
 Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           ++ A++++   K+ R        +RE DV LS        R PR   +  EVT++     
Sbjct: 12  ITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE-D 219
           V+RA+E +E  Y SIDLV   + R+LRK KE+  DH  H  G      S  + P   E  
Sbjct: 65  VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HSASLTPSTEEVS 118

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           +E  +E +     E +L E  VR KYF MPP+T+ +A  QL+++DHDFY F++  TG + 
Sbjct: 119 DESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFKDSATGALQ 178

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 179 VIYRRNHGGY 188

[67][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
           RepID=Q05SE1_9SYNE
          Length = 195

 Score =  112 bits (280), Expect = 2e-23
 Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
 Frame = -2

Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHGVVR 387
           A++++ E K+ R +Q +  +V E DV LS        R PR   +  EVT++     V+R
Sbjct: 15  ALREYTESKLERAVQHYDEMVVEADVHLSV------ARNPRVPQQTAEVTVFANGT-VIR 67

Query: 386 AEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSEDEED 210
           A+E +E  Y SIDLV++ + R+LR+ KE+ +DH   H    +    +E +L      ++ 
Sbjct: 68  AQERSENLYASIDLVANKLSRQLRRYKERHSDHHHSHGHRASTTPTTEAVL------DDS 121

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            ++ +     E  L +  VR KYF MPP++V EA  QL+++DHDF+ FR+  + E+ ++Y
Sbjct: 122 AVDGSLLDGKEAHLPDPGVRRKYFPMPPMSVEEARHQLDLIDHDFFLFRDASSKELQVIY 181

Query: 29  KRKEGGY 9
           +R  GGY
Sbjct: 182 RRNHGGY 188

[68][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N7A9_9CHLO
          Length = 245

 Score =  112 bits (279), Expect = 3e-23
 Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           +++A++ + E K+ + +     + VREVDV  S R   E  +G   +  +VT+YT R+GV
Sbjct: 57  ITEAIRDYCEQKINKAVSHFDMHDVREVDVTCSARS--EKQQGGDLQMTQVTVYT-RNGV 113

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH--GRHMKGPNRLKFSEVILPLPSED 219
           VR+EE A+  Y SID VS  I+RKLRKIKEK+     G+    P + + ++++      D
Sbjct: 114 VRSEEEADNLYASIDAVSDKIERKLRKIKEKKNSKKAGKTKANP-KAQTADIVAAAAEAD 172

Query: 218 E--EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEET-G 48
           E   DEIE            EE V  KY  +   T  EA +++E + H FYAF+N+   G
Sbjct: 173 EARADEIE-----------FEETVGVKYMAVKTSTAMEAAEEMESLGHVFYAFKNKANGG 221

Query: 47  EINIVYKRKEGGY 9
           E+N+VYKR  GGY
Sbjct: 222 EVNVVYKRDAGGY 234

[69][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
           Prochlorococcus marinus clone ASNC2259
           RepID=Q1PKX8_PROMA
          Length = 194

 Score =  111 bits (278), Expect = 3e-23
 Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A+K++ E K+ +    +  +V+E D+ LS        + PR   +  EVT++     
Sbjct: 12  LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222
           V+RAEE  E  Y SIDLVS+ + RKLRK KE+  +T H +  K  + L       P+ S 
Sbjct: 65  VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL-------PIESM 117

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
           +     +    +  E  L +  ++ KYF+M P++  EA  QL+++DHDFY FRN++  E+
Sbjct: 118 ESNFLDKAFFIEGTEASLPKPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNEL 177

Query: 41  NIVYKRKEGGY 9
            ++YKR  GGY
Sbjct: 178 QVIYKRNHGGY 188

[70][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
           MIT 9215 RepID=A8G3B2_PROM2
          Length = 194

 Score =  111 bits (277), Expect = 4e-23
 Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A+K++ E K+ +    +  +V+E D+ LS        + PR   +  EVT++     
Sbjct: 12  LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RAEE  E  Y SIDLVS+ + RKLRK KE+      + +  N+  F      L ++ E
Sbjct: 65  VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF------LIADTE 118

Query: 215 EDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
              ++    KD  E  L E  ++ KYF+M P++  EA  QL+++DHDFY FRN +  E+ 
Sbjct: 119 SRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNNKNNELQ 178

Query: 38  IVYKRKEGGY 9
           ++YKR  GGY
Sbjct: 179 VIYKRNHGGY 188

[71][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
           9202 RepID=B9P0E9_PROMA
          Length = 194

 Score =  111 bits (277), Expect = 4e-23
 Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A+K++ E K+ +    +  +V+E D+ LS        + PR   +  EVT++     
Sbjct: 12  LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RAEE  E  Y SIDLVS+ + RKLRK KE+      + +  N+  F     P+   + 
Sbjct: 65  VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF-----PIADTES 119

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
               E   +   E  L E  ++ KYF+M P++  EA  QL+++DHDFY FRN +  E+ +
Sbjct: 120 RFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNSKNNELQV 179

Query: 35  VYKRKEGGY 9
           +YKR  GGY
Sbjct: 180 IYKRNHGGY 188

[72][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
           subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
          Length = 194

 Score =  110 bits (274), Expect = 1e-22
 Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+  +K++ E K+ +    +  +V+E D+ LS        + PR   +  EVT++     
Sbjct: 12  LTGPLKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           ++RAEE  E  Y SIDLVS+ + RKLRK KE+      +    N+  +S  I      +E
Sbjct: 65  IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKNSYSNAI------EE 118

Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
            D I+     ++ E  L E  ++ KYF+M P+++ EA  QL+ +DHDFY FRN+   E+ 
Sbjct: 119 SDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFYLFRNKLNNELQ 178

Query: 38  IVYKRKEGGY 9
           ++YKR  GGY
Sbjct: 179 VIYKRNHGGY 188

[73][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
           RepID=Q7U8F3_SYNPX
          Length = 195

 Score =  109 bits (272), Expect = 2e-22
 Identities = 63/190 (33%), Positives = 108/190 (56%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           ++ A++ + + K+ R        VRE DV LS        R PR   +  EVT++     
Sbjct: 12  ITPALRDYTQTKLERATHHFGNAVREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSED 219
           V+RA+E +E  Y SIDL +S + R+LR+ KE+ +DH   H    +    +E +       
Sbjct: 65  VIRAQERSENLYASIDLAASKLARQLRRWKERHSDHHHSHGHSASTTPATEAVT------ 118

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           ++ +++ +  +  E EL +  VR KYF MPP+++ EA  QL+++DHDFY FR++++ ++ 
Sbjct: 119 DDSQVDGSLLQGREAELPDPGVRRKYFAMPPMSLEEARRQLDLIDHDFYLFRDKDSDQLQ 178

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 179 VIYRRNHGGY 188

[74][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Prochlorococcus marinus str. MIT 9312
           RepID=Q31CD8_PROM9
          Length = 194

 Score =  109 bits (272), Expect = 2e-22
 Identities = 65/187 (34%), Positives = 101/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+ A+K++ + K+ +    +  +V+E D+ LS     E       +  EVT++     V+
Sbjct: 12  LTGALKEYTQAKIEKATHHYKDIVKEADIHLSI----EKNPSVSLQTAEVTIFANGT-VI 66

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  E  Y SIDLVS+ + RKLRK KE+        +  N   F     P+ S D   
Sbjct: 67  RAEEKTENLYSSIDLVSNKLCRKLRKYKERNYKTNYINQFKNNESF-----PIESADSNV 121

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
             +   ++  E  L E  ++ KYF+M P++  EA  QL+++DHDFY FRN++  E+ ++Y
Sbjct: 122 LDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNNELQVIY 181

Query: 29  KRKEGGY 9
           KR  GGY
Sbjct: 182 KRNHGGY 188

[75][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
           5701 RepID=A3YVD7_9SYNE
          Length = 195

 Score =  108 bits (271), Expect = 2e-22
 Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 6/193 (3%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR--CEVTLYTKRHG 396
           ++ A++ + E K+GR I  +  LV+E DV LS        R PR  +   EVT++     
Sbjct: 12  VTPAIRDYTEAKLGRAINHYEGLVKEADVHLSV------ARNPRVAQQTAEVTVFANGV- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RA+E +E  Y SID+V+  + R+LR+ K++ ++H       N          +  + E
Sbjct: 65  VIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNHHGAGSPAN----------VGDDTE 114

Query: 215 EDEIE-ITPQK---DDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 48
           +  +E + P     D E  L    VR KYF MP +++ +A+ QLE++DHDFY FR E +G
Sbjct: 115 QPSLEGVLPNDLIGDREPALPVPAVRRKYFSMPAMSLDQALHQLELIDHDFYVFREESSG 174

Query: 47  EINIVYKRKEGGY 9
            + +VY+R  GG+
Sbjct: 175 GLQVVYRRNHGGF 187

[76][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
          Length = 195

 Score =  108 bits (270), Expect = 3e-22
 Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           ++ A++ + + K+ R        VRE DV LS        R PR   +  EVT++     
Sbjct: 12  ITPALRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSED 219
           V+RA+E +E  Y SIDL +  + R+LR+ KE+ +DH   H    +    ++V+      +
Sbjct: 65  VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDVV------N 118

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           +   +E +  +  E EL +  VR KYF MPP+ + EA  QL+++DHDFY FR +E+ ++ 
Sbjct: 119 DASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFYLFREKESDQLQ 178

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 179 VIYRRNHGGY 188

[77][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. NATL1A RepID=A2C0K6_PROM1
          Length = 194

 Score =  107 bits (268), Expect = 5e-22
 Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ +++ + + K+ +       +V+E DV LS        R PR   +  EVT++     
Sbjct: 12  LTPSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RA+E +E  Y SIDLV++ + R+LRK KE+   H  H     +   +E I    S D 
Sbjct: 65  VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHNNQSTKSVQNEKIENFSSSDH 124

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
                 +  +  E  L    VR KYF+M P+T+ +A  QL+++DHDFY FR EE   + +
Sbjct: 125 ------SLIEGKEPHLPNPGVRRKYFEMDPMTIEQARVQLDLIDHDFYLFREEEGSALRV 178

Query: 35  VYKRKEGGY 9
           +Y+R  GGY
Sbjct: 179 IYRRNHGGY 187

[78][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Prochlorococcus marinus str. NATL2A
           RepID=Q46H11_PROMT
          Length = 194

 Score =  107 bits (266), Expect = 8e-22
 Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ +++ + + K+ +       +V+E DV LS        R PR   +  EVT++     
Sbjct: 12  LTQSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RA+E +E  Y SIDLV++ + R+LRK KE+   H  H     +   +E      S D 
Sbjct: 65  VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHHNQSTKSVQNEDTQNFSSSDH 124

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
                +T  K  E  L    VR KYF+M P+ + +A  QL+++DHDFY FR EE   + +
Sbjct: 125 S----LTEGK--EPHLPSPGVRRKYFEMTPMNIEQARVQLDLIDHDFYLFREEEGSALRV 178

Query: 35  VYKRKEGGY 9
           +YKR  GGY
Sbjct: 179 IYKRNHGGY 187

[79][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
           DSM 15829 RepID=C2D8Z3_9ACTN
          Length = 192

 Score =  107 bits (266), Expect = 8e-22
 Identities = 67/187 (35%), Positives = 93/187 (49%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +SDA++ HV+ KVG  ++         DV L           P  + CEVT+Y  R+ VV
Sbjct: 13  VSDALRDHVQHKVGDALKVFDITPMSCDVVLRVDKNHS---NPDRKTCEVTVYV-RNNVV 68

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R E  +E  Y +ID  S  + R+LRK K +  D  +  + P          P PS+D  D
Sbjct: 69  RVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP---------APAPSKDLSD 119

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            I+     D        +VR KY D+ P+T  EA+ Q +++ HDFY F N  TG IN+VY
Sbjct: 120 LIDEVADDD-------MLVREKYIDLHPMTEEEALVQTDLIGHDFYVFENATTGLINVVY 172

Query: 29  KRKEGGY 9
            R  GGY
Sbjct: 173 HRHNGGY 179

[80][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
           RepID=Q7VDH9_PROMA
          Length = 195

 Score =  106 bits (265), Expect = 1e-21
 Identities = 65/190 (34%), Positives = 109/190 (57%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           L+ A++++ + K+ + I     +V+E DV LS        + PR   +  EVT++     
Sbjct: 12  LTPALREYTKSKLEKAIHHFGDMVKEADVHLSV------AKNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RA+E ++  Y SIDLVS+ + R+LR+ KE+ +DH  H    +R      I P   E  
Sbjct: 65  VIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH--HHSPGHRAS----ITPTTEEVL 118

Query: 215 EDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           ED+ I  +  +  E +L +  +R KYF M P+ + +A  QL+++DHDFY F+  E+ ++ 
Sbjct: 119 EDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFYLFKEAESEQLQ 178

Query: 38  IVYKRKEGGY 9
           ++Y+RK GGY
Sbjct: 179 VIYRRKNGGY 188

[81][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
           RepID=D0CH01_9SYNE
          Length = 195

 Score =  105 bits (263), Expect = 2e-21
 Identities = 62/190 (32%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
           ++ +++ + + K+ R        VRE DV LS        R PR   +  EVT++     
Sbjct: 12  ITPSLRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSED 219
           V+RA+E +E  Y SIDL +  + R+LR+ KE+ +DH   H    +    ++V+      +
Sbjct: 65  VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDVV------N 118

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           +   +E +  +  E EL +  VR KYF MPP+ + +A  QL+++DHDFY FR +E+ ++ 
Sbjct: 119 DASPVESSLLQGREAELPDPGVRRKYFAMPPMGLEDARRQLDLIDHDFYLFREKESDQLQ 178

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 179 VIYRRNHGGY 188

[82][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
           marinus str. MIT 9211 RepID=A9BE19_PROM4
          Length = 197

 Score =  103 bits (257), Expect = 9e-21
 Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR--CEVTLYTKRHG 396
           L+ +++++ + K+ + I     +V+E DV LS        + P   +   EVT++     
Sbjct: 12  LTPSLREYTQSKLEKAIHHFDGIVQEADVHLS------IAKNPSVPQQIAEVTVFANGT- 64

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RA+E ++  Y SIDLV++ + R+LRK KE+ +DH  H  G      S  + P      
Sbjct: 65  VIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH-HHSHG-----HSASLTPTTEAVV 118

Query: 215 EDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           ED+ I+ +  +  E  L    +R KYF MPP++  +A  QL+++DHDFY F+  ET ++ 
Sbjct: 119 EDKAIDSSLIQGKEAHLPTPGIRRKYFSMPPMSTEQARHQLDLIDHDFYMFKEIETQQLQ 178

Query: 38  IVYKRKEGGY 9
           ++Y+R  GGY
Sbjct: 179 VIYRRTHGGY 188

[83][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
          Length = 196

 Score =  102 bits (253), Expect = 3e-20
 Identities = 64/187 (34%), Positives = 97/187 (51%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +S+A++ HV+ K+G  ++         DV L           P  +  EVT++  R+ VV
Sbjct: 13  ISEALRAHVDQKIGDALKVFDITPMSCDVVLRVDKNPS---NPDRKTTEVTVFV-RNNVV 68

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R    ++  Y +ID  +  + R+LRK K K  +   HMK       SE  + L  ED  +
Sbjct: 69  RVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMK-------SERGIALTQEDLAN 121

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            IEI       E+L +++VR KY D+ P+T  EA+ Q +++ HDFY F N  TG  N++Y
Sbjct: 122 LIEIPA-----EDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVFVNSSTGLTNVIY 176

Query: 29  KRKEGGY 9
            RK GGY
Sbjct: 177 HRKNGGY 183

[84][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Deinococcus geothermalis DSM 11300
           RepID=Q1IYK5_DEIGD
          Length = 186

 Score =  101 bits (251), Expect = 5e-20
 Identities = 64/187 (34%), Positives = 101/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ +VE+K+ R + + S  + +  V L+ R   + GR     R EV L    +G++
Sbjct: 13  VTDAMRDYVEEKLTR-LDRFSDQITDARVVLTVRDVRDAGR---RNRVEVQLNVP-NGII 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEEH    Y +ID  S +++R+LRK K K   H +    P          P P   E D
Sbjct: 68  RAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP----------PQPGLAEAD 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                    D+ E   E+VRTK FD+ P++  +A+ Q+E + HDFY F+N +TG   +VY
Sbjct: 118 ----VNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVFKNMDTGGCAVVY 173

Query: 29  KRKEGGY 9
           +R++G Y
Sbjct: 174 RRRDGHY 180

[85][TOP]
>UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV
          Length = 188

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 63/187 (33%), Positives = 102/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +SDA++ +V++K+ R + +++  + +  V L+ R   + GR     R EV L    +G++
Sbjct: 13  VSDAMRDYVQEKLTR-LDRYNDQITDARVTLTVRDVRDAGR---RNRVEVQLNVP-NGII 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEEH    Y +ID  S +++R+LRK K       R+MK     +   V  P P   E D
Sbjct: 68  RAEEHHSDMYAAIDKASDVLERQLRKFKT------RYMKQ----RHETVPQPGPGPAEAD 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
              +    DD  E + E+VR K FDM P++  +A+ Q+E + HDFY F N  +    +VY
Sbjct: 118 ---VNAGLDDVSEFMPEIVRQKRFDMRPMSPEDAVTQMEALGHDFYVFMNMGSNACGVVY 174

Query: 29  KRKEGGY 9
           +R++G Y
Sbjct: 175 RRRDGHY 181

[86][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
           16795 RepID=B0A7Y1_9CLOT
          Length = 187

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 67/187 (35%), Positives = 102/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D +K  VEDK+ + + ++ +   EV V +S R   +        + EVT+      ++
Sbjct: 18  LTDGIKGAVEDKLSK-LDRYLHEDTEVKVTVSARKAKQ--------KIEVTIIPINGPII 68

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+  E  Y +ID+V   + ++LR+ K K       +KG  + K  E I     ED   
Sbjct: 69  RAEDSEENLYAAIDVVYDKLNKQLRRYKNK-------LKGKYQSKGQESIRFQNIEDNAA 121

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E      KD E +++ E  R K FDM P++  EA+ Q+E+V HDFY FRN +T EI+IVY
Sbjct: 122 E-----DKDGEFDIVIE--RHKKFDMKPMSPEEAVLQMELVGHDFYMFRNIDTDEISIVY 174

Query: 29  KRKEGGY 9
           +R+ GGY
Sbjct: 175 RRETGGY 181

[87][TOP]
>UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN
          Length = 191

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 61/189 (32%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
           ++DA++++ E+K+G  ++      LV E+ + +           PR   CEVTL TK H 
Sbjct: 12  VTDALREYAEEKIGNSMKVMDIDPLVAEIVLFVEKNPAN-----PRPAVCEVTLRTKGH- 65

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           ++R EEH E  Y +ID+ ++ + R+LRK K K  D  R ++  +     E I   PS   
Sbjct: 66  IIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVD--RKLRAAD-----ETIRIEPSAAG 118

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
           E +++   Q+  ++E    VVR K  +  PLT  EA+ +++++ HDF+A+ + ++G +N+
Sbjct: 119 ELDVDGLMQELSDDE----VVRVKTIEFEPLTEEEALVKIDLLGHDFFAYTDRDSGLVNV 174

Query: 35  VYKRKEGGY 9
           +Y+R +GGY
Sbjct: 175 LYRRDDGGY 183

[88][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
           13275 RepID=B6FVY1_9CLOT
          Length = 194

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+  +K ++E K+ ++     Y+  + DV+++     + GR     + EVT+  K   V+
Sbjct: 20  LTQGIKDNIESKLSKL---DKYISPDTDVKVTV--SAKKGR----HKIEVTIAPKNGHVI 70

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP--NRLKFSEVILPLPSEDE 216
           RAEE  E  Y +IDLV   ++ +L+K K+K     +  K    +  + ++ IL    ED 
Sbjct: 71  RAEESQENLYPAIDLVVDKLKIQLKKYKDKMQKRHQENKSIRFDSPEINDSILEEDLEDF 130

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
           EDE+ I             + R K  ++ P++  EA+ Q+E+V HDFY FRN+ET EI +
Sbjct: 131 EDELFI-------------IKRRKRINIKPMSEEEAVLQMELVGHDFYIFRNDETDEIAL 177

Query: 35  VYKRKEGGY 9
           VYKRK GGY
Sbjct: 178 VYKRKNGGY 186

[89][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
           49176 RepID=C4G2X0_ABIDE
          Length = 175

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 59/187 (31%), Positives = 100/187 (53%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++D ++  +E+K+G++     Y   + +V ++ +   +       ++ EVT+  K H ++
Sbjct: 12  VTDGLRNAIEEKLGKL---EHYFTPDTEVHVTLKVEKD------RQKVEVTVPVKGH-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  Y SIDL+  II+R+LR+ K K  D  +         F+   +         
Sbjct: 62  RAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASN-----FTSAFM--------- 107

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                 Q DD E+   +V+RTK F + P+   EA  Q+E+++H FY FRN ET E+N+VY
Sbjct: 108 ------QDDDYEDEDVKVIRTKRFAVKPMDPEEACVQMELLNHSFYVFRNAETDEVNVVY 161

Query: 29  KRKEGGY 9
           KRK G Y
Sbjct: 162 KRKNGDY 168

[90][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
           RepID=B0P2P9_9CLOT
          Length = 179

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
           +++ +K  +E+K+GR+     YLV +  V+V LS + G +        + EVT+  K H 
Sbjct: 15  VTEGIKAAIEEKLGRL---DKYLVDDTIVNVTLSVQKGRQ--------KIEVTIPMKGH- 62

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           ++RAEE +E  Y SIDLV  +I+R++R+ K +  +           K+          ++
Sbjct: 63  IIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRLMNQ----------KYDGTSFKQEFMEQ 112

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
           ED++E     DDE  +I    R+K F + P+ V EA  Q+E++ HDF+ FRN +T E+N+
Sbjct: 113 EDDVE-----DDEIRII----RSKKFAIKPMDVEEACVQMELLGHDFFVFRNADTFEVNV 163

Query: 35  VYKRKEGGY 9
           VYKRK   Y
Sbjct: 164 VYKRKGNTY 172

[91][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
           QCD-23m63 RepID=UPI00017F5F53
          Length = 183

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 58/187 (31%), Positives = 105/187 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+DA+K  +E K+ ++    +Y+  + DV+++        R  R ++ EVT+ T    ++
Sbjct: 12  LTDAIKNKIESKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIEVTIATVNGPII 62

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+  E  Y +ID+V   + ++L+K K++  D  +  K    ++F +  + L  E E+ 
Sbjct: 63  RAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDAEINLADEQED- 118

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                   D+ +EL+  + R K F + P++  EA+ Q+E++ HDFY F+N ++ EI +VY
Sbjct: 119 ------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVY 170

Query: 29  KRKEGGY 9
           KR  GGY
Sbjct: 171 KRNNGGY 177

[92][TOP]
>UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
           ATCC 25986 RepID=A4ECY7_9ACTN
          Length = 194

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 62/187 (33%), Positives = 92/187 (49%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ HV++K+G  ++        VDV L           P     EVT    R  V+
Sbjct: 12  VTDALRAHVDEKIGEALKVFDIEPMTVDVVLRYEKNPS---NPNPAIVEVTARA-RGSVI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R  EH    Y +IDL +  + R+LRK K K  D        NR   +      P E  ED
Sbjct: 68  RVAEHGADMYAAIDLSADKVTRQLRKFKTKVVD--------NRQGGASAADVAPVERVED 119

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
             ++   ++D++ L+ E    K  D+ P+T  +A+ Q +++ HDFY F N  TG IN+VY
Sbjct: 120 LADLLLPEEDDDLLVRE----KVIDVTPMTEEQALVQTDLLGHDFYVFENATTGLINVVY 175

Query: 29  KRKEGGY 9
            RK GGY
Sbjct: 176 HRKNGGY 182

[93][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
           RepID=Q18CN1_CLOD6
          Length = 183

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 58/187 (31%), Positives = 105/187 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+DA+K  +E K+ ++    +Y+  + DV+++        R  R ++ EVT+ T    ++
Sbjct: 12  LTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIEVTIATVNGPII 62

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+  E  Y +ID+V   + ++L+K K++  D  +  K    ++F +  + L  E E+ 
Sbjct: 63  RAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDAEINLADEQED- 118

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                   D+ +EL+  + R K F + P++  EA+ Q+E++ HDFY F+N ++ EI +VY
Sbjct: 119 ------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVY 170

Query: 29  KRKEGGY 9
           KR  GGY
Sbjct: 171 KRNNGGY 177

[94][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
           43531 RepID=C4V4X1_9FIRM
          Length = 181

 Score = 94.0 bits (232), Expect = 7e-18
 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++ +VE +VG+ I K+   V E+ V LS  G        +  + EVT    R  ++
Sbjct: 13  VTPALRDYVEKRVGK-ITKYFDNVGEIAVLLSVEG--------KHHKVEVTAPVARGILL 63

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSEDEE 213
           R EEH+E  Y SIDLV   ++R++RK K K     R  +G  + +  E    P+P EDE 
Sbjct: 64  RGEEHSEDMYSSIDLVIEKLERQIRKQKTKLAR--RFRQGGFKAEAVETFAQPIPEEDE- 120

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
                          +  VV+TK F + P+ V EAI Q+ +++H F+ FRN E+ E+NIV
Sbjct: 121 ---------------LYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFRNAESEEVNIV 165

Query: 32  YKRKEGGY 9
           Y R +G Y
Sbjct: 166 YGRHDGKY 173

[95][TOP]
>UniRef100_B9CNR8 Light-repressed protein n=1 Tax=Atopobium rimae ATCC 49626
           RepID=B9CNR8_9ACTN
          Length = 195

 Score = 93.6 bits (231), Expect = 9e-18
 Identities = 61/187 (32%), Positives = 95/187 (50%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +SDA++ HVE+K+G  ++         DV L              +  EVT++  R+ VV
Sbjct: 13  VSDALRSHVEEKIGDALKVFDIQPMTCDVVLRVDKNPS---NLERKSVEVTVFV-RNSVV 68

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R     +  YG+ID  +  + R+LRK K +  D   H +       S+       E+  +
Sbjct: 69  RVVSSGDDMYGAIDEAAEKVTRQLRKYKTRIVDKHHHAQNTRGRALSQ-------EELAN 121

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            IE TP +D +++L+ E    KY D+ P+T  EA+ Q +++ HDFY F N  TG  N++Y
Sbjct: 122 LIE-TPAEDLDDQLVRE----KYIDLLPMTEEEALVQTDLLGHDFYVFVNSTTGLTNVIY 176

Query: 29  KRKEGGY 9
            RK GGY
Sbjct: 177 HRKNGGY 183

[96][TOP]
>UniRef100_B9I261 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I261_POPTR
          Length = 118

 Score = 93.6 bits (231), Expect = 9e-18
 Identities = 50/90 (55%), Positives = 62/90 (68%)
 Frame = -2

Query: 323 KLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTK 144
           KLRKIK+KE+DHGRHMKG N+LK  E   P+  E E     ++ +KDD+   ++E V TK
Sbjct: 28  KLRKIKDKESDHGRHMKGFNKLKVRE---PMSQEVENVADTVSQRKDDDN--LDEAVHTK 82

Query: 143 YFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54
           YFDMPPLTV EAI +L  VDH FY F + E
Sbjct: 83  YFDMPPLTVHEAIVRLGNVDHAFYGFGHAE 112

[97][TOP]
>UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335
           RepID=B8BRE6_THAPS
          Length = 198

 Score = 93.6 bits (231), Expect = 9e-18
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT--LYTKRHG 396
           L+ A+  +V  K+ + + K    V   DV L+        + P+ +       + T +  
Sbjct: 16  LTPALSDYVNSKIEKTVGKLPLAVSHCDVYLTVN------KNPKVKDAHTAEVVTTLKGT 69

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSEVILPLPSE 222
             R  E +   Y SIDLV++ + RKLRK KE+  D  HG    G N    +EV+  +  +
Sbjct: 70  TFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGEN---IAEVLNAIEVD 126

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
           + ED  E     D ++ ++ +V  T      P+++ EAI  L+ +DHDFY FR+EET E+
Sbjct: 127 ESEDGAEEESYIDPDQAVVTKVKST------PISIKEAIFALDYIDHDFYVFRDEETNEV 180

Query: 41  NIVYKRKEGG 12
           ++VYKR  GG
Sbjct: 181 SVVYKRNAGG 190

[98][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
           ATCC 43255 RepID=UPI00017F5ACC
          Length = 185

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 62/187 (33%), Positives = 102/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D +K +V+ K+ R+     YL  E +V+++     +       ++ EVT+      ++
Sbjct: 12  LTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVEVTIIPINGQII 62

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F      L   D   
Sbjct: 63  RAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN----LDFIDNSS 115

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E +    ++DE  +IE   R K F++ P++  EAI Q+E+V H+FY FRN++  EINIVY
Sbjct: 116 EFDDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVY 172

Query: 29  KRKEGGY 9
           KRK GGY
Sbjct: 173 KRKAGGY 179

[99][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
           RepID=C9XIR4_CLODI
          Length = 183

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 58/187 (31%), Positives = 105/187 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+DA+K  +E K+ ++    +Y+  + DV+++        R  R ++ EVT+ T    ++
Sbjct: 12  LTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIEVTIATVNGPII 62

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+  E  Y +ID+V   + ++L+K K++  D  +  K    ++F +  + L  E E+ 
Sbjct: 63  RAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDSEINLADEQED- 118

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                   D+ +EL+  + R K F + P++  EA+ Q+E++ HDFY F+N ++ EI +VY
Sbjct: 119 ------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVY 170

Query: 29  KRKEGGY 9
           KR  GGY
Sbjct: 171 KRNNGGY 177

[100][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
           RepID=C9XLM7_CLODI
          Length = 187

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 61/187 (32%), Positives = 104/187 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D +K +V+ K+ R+     YL  E +V+++     +       ++ EVT+      ++
Sbjct: 12  LTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVEVTIIPINGQII 62

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F  +   + +  E D
Sbjct: 63  RAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENLDF-IDNSSEFD 118

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           + +     DDEE+    + R K F++ P++  EAI Q+E+V H+FY FRN++  EINIVY
Sbjct: 119 DYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVY 174

Query: 29  KRKEGGY 9
           KRK GGY
Sbjct: 175 KRKAGGY 181

[101][TOP]
>UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis
           DSM 13280 RepID=C4FCG3_9ACTN
          Length = 194

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 60/187 (32%), Positives = 95/187 (50%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ HV++K+G  ++         DV L           P     EVT+   R  V+
Sbjct: 12  VTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVEVTVRA-RGSVI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R  EH    Y +IDL +  + R+LRK K +  D+ +       L  +EV    P E   D
Sbjct: 68  RVAEHGADMYAAIDLAAEKVTRQLRKFKTRVVDNRQQ-----GLSAAEVA---PVEPVAD 119

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
             ++   +D++++L    VR K  ++ P+T  EA+ Q +++ HDFY F N  TG +N+VY
Sbjct: 120 LADLLLPEDEDDQL----VRVKEVELTPMTDEEALVQTDLIGHDFYVFENSVTGLVNVVY 175

Query: 29  KRKEGGY 9
            RK GGY
Sbjct: 176 HRKNGGY 182

[102][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
          Length = 178

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 62/187 (33%), Positives = 98/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++ +K  + +K+G+ ++K+     E+ V LS     +        + EVT+  K + +V
Sbjct: 12  VTEGLKSAIYEKIGK-LEKYFNPEAEIHVTLSVEKDRQ--------KIEVTIPMKGN-IV 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ +   Y SIDLV  +I+R+L+K K K  D  +     N   F +V   L  + +E+
Sbjct: 62  RAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFNPSFFEDV---LNEDSDEE 118

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           +I IT              R K F M P+   EA  Q+E++ H+FY FRN ET E+N+VY
Sbjct: 119 DINIT--------------RVKRFAMKPMDAEEACVQMELLGHNFYVFRNAETDEVNVVY 164

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 165 KRKGNSY 171

[103][TOP]
>UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Roseiflexus castenholzii DSM 13941
           RepID=A7NNI5_ROSCS
          Length = 198

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 59/187 (31%), Positives = 98/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           LSD  +QH+E K+ R+ +   YL R   V +          G    R +VT+      +V
Sbjct: 17  LSDRQRQHIEQKLSRLDR---YLDRIDKVTVEHMEEMRRNEG-NVHRVQVTVVGDHGVLV 72

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE  A   Y +ID V   +QR++ + K+K    GR      R +  +++  LP  +   
Sbjct: 73  RAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGRL-----RRQGGQIVEALPEMNAA- 126

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                P   DEEE    +VRTK F + P+   EA++Q+E++ H F+ F++ +TG++N++Y
Sbjct: 127 ----APAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQDADTGKLNVLY 182

Query: 29  KRKEGGY 9
           +R++G Y
Sbjct: 183 RRQDGNY 189

[104][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
           RepID=C2KX79_9FIRM
          Length = 176

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 64/187 (34%), Positives = 98/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D +K  VE K+G+ + K        +V LST+           ++ EVT+  K   V+
Sbjct: 12  LTDGLKNGVEKKLGK-LDKFFQAETPCNVTLSTQKD--------MQKIEVTIPVKG-SVI 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE     Y SIDLV  +++R++RK K K     RH                 S+   +
Sbjct: 62  RAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQ--RHQAA--------------SDFSSE 105

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            IE  P +D+EE    ++VRTK+ D+ P+T  EA  Q+E++ H F+ F++  TG++N+VY
Sbjct: 106 FIEEKPAQDEEEI---KIVRTKHIDLKPMTAEEACLQMELLGHSFFVFQDGNTGKVNVVY 162

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 163 KRKANSY 169

[105][TOP]
>UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
           13279 RepID=B6G8G1_9ACTN
          Length = 194

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 60/187 (32%), Positives = 95/187 (50%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ HV++K+G  ++         DV L           P     EVT+   R  V+
Sbjct: 12  VTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVEVTVRA-RGSVI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R  EH    Y +IDL +  + R+LRK K +  D+ +       L  +EV    P  D  D
Sbjct: 68  RVAEHGADMYAAIDLAADKVTRQLRKFKTRVVDNRQQ-----GLSAAEVAPVEPVADLAD 122

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            +   P+++D++     +VR K  ++ P+T  +A+ Q +++ HDFY F N  TG IN+VY
Sbjct: 123 LL--IPEEEDDQ-----LVRVKEIELTPMTEEQALVQTDLLGHDFYVFENSTTGLINVVY 175

Query: 29  KRKEGGY 9
            RK GGY
Sbjct: 176 HRKNGGY 182

[106][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
           QCD-23m63 RepID=UPI00017F60C6
          Length = 185

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 62/187 (33%), Positives = 101/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D +K +V+ K+ R+     YL  E +V+++     +       ++ EVT+      ++
Sbjct: 12  LTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVEVTIIPINGQII 62

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F  V     S + +D
Sbjct: 63  RAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENVDFIDNSSEFDD 119

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                   DDEE     + R K F++ P++  EAI Q+E+V H+FY FRN++  EINIVY
Sbjct: 120 Y-------DDEEYENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVY 172

Query: 29  KRKEGGY 9
           KRK GGY
Sbjct: 173 KRKAGGY 179

[107][TOP]
>UniRef100_Q7XYJ6 Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelowiella natans
           RepID=Q7XYJ6_BIGNA
          Length = 170

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 13/153 (8%)
 Frame = -2

Query: 431 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 252
           + EVT+Y K   V+R    + + Y SIDLV+ ++ RKLRK KE++   G+      R  +
Sbjct: 15  KIEVTVYVKDSKVIRGSVSSVSEYSSIDLVTDLVNRKLRKYKERK--EGKRTASGVRTFY 72

Query: 251 SEVILPLPSEDEEDEIEITPQKDD--EEEL---------IEEV--VRTKYFDMPPLTVFE 111
           +  I    S+  + E      +DD  +EE          +E+V  VR K F MPP+++ +
Sbjct: 73  TNDI----SDSSDVEGAAVQGQDDVQQEEYSGIPEGYAPVEDVSVVRRKKFPMPPISIED 128

Query: 110 AIDQLEMVDHDFYAFRNEETGEINIVYKRKEGG 12
           A   L+ +DHDFY FRN ET EIN+VY+R EGG
Sbjct: 129 ATLCLDYLDHDFYVFRNSETKEINVVYRRAEGG 161

[108][TOP]
>UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA
          Length = 191

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 59/187 (31%), Positives = 104/187 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++ ++++VE+K+ R + +++  + +  V L+ R   +     R  R EV L     G++
Sbjct: 13  VTEPMREYVEEKLSR-LDRYTDQITDARVTLTVR---DVRNNERRNRVEVQLNVPG-GII 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEEH    Y +ID  S +++R+LRK K       R+MK   R +     LP P+E E +
Sbjct: 68  RAEEHHADMYAAIDKASDVLERQLRKFKT------RYMK--QRQEGRPEPLPGPAEAEVN 119

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                   DD  E   E+VR K F++ P++  +A+ Q+E + HDFY F++ + G+  +VY
Sbjct: 120 AQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQDLQ-GQTGVVY 178

Query: 29  KRKEGGY 9
           +R++G Y
Sbjct: 179 RRRDGHY 185

[109][TOP]
>UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus
           RepID=Q5KV92_GEOKA
          Length = 183

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 63/187 (33%), Positives = 110/187 (58%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++++VE K+G+ ++++     +V V ++ +   + G+G    + EVT+    H ++
Sbjct: 12  VTPALREYVEKKIGK-LERYFDGTEDVHVHVNLKVYND-GQG----KIEVTI-PMPHLLL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  E  Y +IDLV+  ++R++RK K K      + K  +R K +++  P+PS     
Sbjct: 65  RAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAKLAAPVPSGASAA 119

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E       ++EEE   E+VRTK+F + P+   EAI Q+ ++ H+F+ F N ET   NIVY
Sbjct: 120 E-------NNEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 170

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 171 RRKDGKY 177

[110][TOP]
>UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus
           JCSC1435 RepID=Y2139_STAHJ
          Length = 192

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 61/188 (32%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ ++EDK+G++ +  + +   V  V++ T           T + EVT+  K +  
Sbjct: 13  ITDAIRNYIEDKIGKLERYFNDVPNAVAHVKVKTYQNS-------TTKIEVTIPLK-NVT 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE  +  Y  IDLV+S ++R++RK K +   + +H        F   +   P E+ +
Sbjct: 65  LRAEERHDDLYAGIDLVTSKLERQVRKYKTRV--NRKHKTHGEPEAFVAEVQEAPPENVD 122

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           D +   P  D E E+I    R+K F + P+   EA+ Q+E++ HDFY F + ET   +IV
Sbjct: 123 D-VNAEPTNDSEIEII----RSKQFSLKPMDSEEAVLQMELLGHDFYIFTDRETDGTSIV 177

Query: 32  YKRKEGGY 9
           YKRK+G Y
Sbjct: 178 YKRKDGKY 185

[111][TOP]
>UniRef100_C7ML59 Ribosomal subunit interface protein n=1 Tax=Cryptobacterium curtum
           DSM 15641 RepID=C7ML59_CRYCD
          Length = 188

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRG-PRTRRCEVTLYTKRH 399
           ++DA+K + E+K+G  ++      L+ EV + +      E  R   R   CEVT+  K H
Sbjct: 12  VTDALKSYAEEKIGNSMKVMDIDPLIAEVILHV------EQNRAIARPAICEVTMTAKGH 65

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
            ++R EEH E  Y +ID+ ++ + R+LRK K +  +        +        L L +  
Sbjct: 66  -IIRVEEHEEDMYAAIDVAAAKVLRQLRKFKTRVVERNTRTDAASIRSAKSAKLDLDALM 124

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           EE         DDE      VVR K  D+ PLT  EA+ +++++ HDF+A+ + +T E  
Sbjct: 125 EE-------LSDDE------VVREKSIDLQPLTEEEALVEIDLLGHDFFAYTDRDTNEFR 171

Query: 38  IVYKRKEGGY 9
           I+Y+R+ GGY
Sbjct: 172 ILYRRRNGGY 181

[112][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
           35704 RepID=B0NJJ3_EUBSP
          Length = 179

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 58/187 (31%), Positives = 102/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++  +K+ VE+K+G+ ++++     E+ V LS +           ++ EVT+  K  G++
Sbjct: 12  VTPGLKEAVENKLGK-LERYFTPDTEIHVTLSVQR--------ERQKIEVTIPVKG-GII 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+LRK K K     RH +G    K             ++
Sbjct: 62  RSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK-------------QE 106

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
             +   + +D+ E+  ++VRTK F   P+   +A  Q+E++ HDF+ F N ET E+N+VY
Sbjct: 107 FFDSGERSEDDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFFVFCNAETDEVNVVY 164

Query: 29  KRKEGGY 9
           +RK G +
Sbjct: 165 RRKNGTF 171

[113][TOP]
>UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD
          Length = 197

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 54/191 (28%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKV---GRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRH 399
           +S+  ++H+E+K+   GR +   + +  EV        G  +       R + TL  +  
Sbjct: 12  ISERQREHIEEKLAKLGRYLNGITSITVEVQHEQQRNVGEVY-------RVQTTLVAEHG 64

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSE 222
            ++RAEE A   Y +ID V  ++QR++++ K+K     R ++   N L  +E +    +E
Sbjct: 65  VILRAEERAADLYAAIDAVQEVLQRQIQRYKDKYWRRSRELRRATNGLTPAEEVAIAEAE 124

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
            E     +      E E + +V+RTK F + P+ V +AI+Q+E++ H F+ F++ ET +I
Sbjct: 125 TEAMTAPV------ETEPVAKVIRTKTFRLRPMFVDDAIEQMELLGHTFFVFQDAETMQI 178

Query: 41  NIVYKRKEGGY 9
           +++Y+R++G Y
Sbjct: 179 SVLYRRRDGNY 189

[114][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
           27755 RepID=B0G387_9FIRM
          Length = 177

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 59/187 (31%), Positives = 102/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++  +K  VE K+G+ +Q++     E+ V LS +           ++ EVT+  K + ++
Sbjct: 12  VTPGLKDAVESKLGK-LQRYFTPDTEIHVTLSVQ--------KEHQKIEVTIPVKGN-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ ++  Y SIDLV  +I+R+LRK K K     ++ +G N   FS+ +       E+D
Sbjct: 62  RSEQESDDMYVSIDLVEEVIERQLRKYKNKLV--AKNQEGNN---FSKTLFETEESIEDD 116

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E++I              VRTK F + P+   +A  Q+E++ H+F+ F N E  E+N+VY
Sbjct: 117 EVKI--------------VRTKRFGIKPMYPEDACVQMELLGHNFFVFFNAENEEVNVVY 162

Query: 29  KRKEGGY 9
           KRK+G +
Sbjct: 163 KRKDGSF 169

[115][TOP]
>UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens
           ATCC 49175 RepID=C8NDQ1_9LACT
          Length = 186

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 60/187 (32%), Positives = 104/187 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++Q+ E K+ + ++K+   V      ++ +   E     +T + EVT+    + V+
Sbjct: 19  VTEAIRQYAEKKISK-LEKYFTDVANATAYVNLKVYTE-----KTAKVEVTIPLP-YLVL 71

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE +   YGSIDLV   ++R++RK K K       +   +R K  +++LP        
Sbjct: 72  RAEETSIDLYGSIDLVVDKLERQVRKHKTK-------INRKSREKGFDIVLPT------- 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                P+  +EEE   E+VRTK  D+ P+   EA+ Q+ M+ H+F+ +++ ET E NIVY
Sbjct: 118 ----LPEAPEEEETGLEIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIYQDAETNETNIVY 173

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 174 RRKDGKY 180

[116][TOP]
>UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis
           SK119 RepID=C2LVK8_STAHO
          Length = 191

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 56/191 (29%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ ++E+K+G++ +  + +   V  V++ T             + EVT+  K +  
Sbjct: 13  ITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYQNS-------ATKIEVTIPLK-NVT 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE- 216
           +RAEE  +  Y  IDLV+S ++R++RK K +     R    P          P  +E + 
Sbjct: 65  LRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEPE---------PFIAEQQT 115

Query: 215 --EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
              +++E T +  +E E+  E++R+K F + P+   EA+ Q++++ HDFY F + ET   
Sbjct: 116 VVNEDVEATSESSNENEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDFYIFTDRETDGT 173

Query: 41  NIVYKRKEGGY 9
           +IVY+RK+G Y
Sbjct: 174 SIVYRRKDGKY 184

[117][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
           13814 RepID=A6BHR0_9FIRM
          Length = 178

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 64/187 (34%), Positives = 102/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++  +++ VE K+G+ + ++     E+ V LS + G +        + EVT+  K  G+V
Sbjct: 12  VTPGLREAVESKLGK-LGRYFTPNTEIHVTLSVQKGHQ--------KIEVTIPVKG-GLV 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+LRK K K     R  +G N   F +        D ED
Sbjct: 62  RSEQESSDMYVSIDLVEEVIERQLRKYKNKLV--AREQEGGN---FKQEFF-----DAED 111

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            IE      D+ E+  ++VRTK F   P+   +A  Q+E++ HDFY F N E+ E+N+VY
Sbjct: 112 NIE------DDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFYVFCNAESDEVNVVY 163

Query: 29  KRKEGGY 9
           +RK G +
Sbjct: 164 RRKNGTF 170

[118][TOP]
>UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus
           RepID=A9W9Y4_CHLAA
          Length = 197

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 54/191 (28%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS---TRGGGEFGRGPRTRRCEVTLYTKRH 399
           +SD  + H+E+K+ + ++++ + +  + V +     R  GE        R + TL  +  
Sbjct: 12  ISDRQRAHIEEKLSK-LERYLHGITSITVEVQHEQQRNAGE------VYRVQTTLVAEHG 64

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSE 222
            ++RAEE A   Y +ID V  ++QR++ + K+K     R  +  PN L  +E +      
Sbjct: 65  VILRAEERAPDLYAAIDEVQEVLQRQIARYKDKYWRRSREQRRAPNGLTPAEEVA---IA 121

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
           + E     TP +   E     V+RTK F + P+ V +AI+Q+E++ H+F+ F++ ET ++
Sbjct: 122 EAEAAALATPTEVGSEA---RVIRTKTFRLRPMFVDDAIEQMELLGHNFFVFQDAETMQV 178

Query: 41  NIVYKRKEGGY 9
           +++Y+R++G Y
Sbjct: 179 SVLYRRRDGNY 189

[119][TOP]
>UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
           BAA-613 RepID=A8S366_9CLOT
          Length = 187

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++  +K  VE K+G++  +H +    EV V LS +   +        + EVT+  K +  
Sbjct: 23  VTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KIEVTIPVKGN-T 71

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE +   Y SIDLV  II+R++R+ ++K  D     K    + FS+  +     +EE
Sbjct: 72  IRAEESSTDMYVSIDLVEEIIERQIRRYRKKLID-----KKQAAISFSQAFI-----EEE 121

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           DE++     DDE +    +V+TK F + P    EA  Q+EM+ H+FY F N +T ++N+V
Sbjct: 122 DEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNADTDQVNVV 172

Query: 32  YKRKEGGY 9
           YKRK G Y
Sbjct: 173 YKRKNGTY 180

[120][TOP]
>UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
           DSM 15981 RepID=C0CVD1_9CLOT
          Length = 176

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++  +K  VE K+G++  +H +    EV V LS +   +        + EVT+  K +  
Sbjct: 12  VTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KIEVTIPVKGN-T 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE +   Y SIDLV  +I+R++R+ ++K  D     K    L FS+  +    +++E
Sbjct: 61  IRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAALSFSQAFIDEEEDEQE 115

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           D+I I              V+TK F + P    EA  Q+EM+ H+FY F N +T ++N+V
Sbjct: 116 DDIRI--------------VKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNSDTDQVNVV 161

Query: 32  YKRKEGGY 9
           YKRK G Y
Sbjct: 162 YKRKNGTY 169

[121][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
           27758 RepID=C0BAM2_9FIRM
          Length = 189

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 64/187 (34%), Positives = 97/187 (51%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++  ++Q VE K+G++     Y   E D+ ++     E       ++ EVT+  K + ++
Sbjct: 23  ITPGLRQAVEQKLGKL---EKYFTPETDIIVTLSVEKE------RQKIEVTIPVKGN-II 72

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  II+R+LRK K K        +G +  +  E I    S  E D
Sbjct: 73  RSEQESSDMYVSIDLVEEIIERQLRKYKTKLI---AKQQGGHDFR-QEFIESDTSAAESD 128

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           EIEI              VRTK F + P+   +A  Q+E++ H+FY F N ET E+N+VY
Sbjct: 129 EIEI--------------VRTKRFGIKPMFPEDACIQMELLGHNFYVFSNAETDEVNVVY 174

Query: 29  KRKEGGY 9
           KRK G Y
Sbjct: 175 KRKNGTY 181

[122][TOP]
>UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB
          Length = 190

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
 Frame = -2

Query: 566 SDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
           +DA+  +++   +K+   I + +  +  ++VR             +T + EVT+    + 
Sbjct: 14  TDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEVTIPLP-YL 63

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
            +RAEE     Y ++DLVS+ + R++RK K +     R  +G   + F+E I P+PS+  
Sbjct: 64  TLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAIDPVPSDTN 122

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
           ED+      K D       V+R K   + P+ + EA+ Q+EM+DHDF+ F N +T +++I
Sbjct: 123 EDK------KID-------VIRRKNLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQLDI 169

Query: 35  VYKRKEGGY 9
           VYKR +G Y
Sbjct: 170 VYKRDDGKY 178

[123][TOP]
>UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN
          Length = 179

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + I+++     EV V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-IERYFDTFPEVKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F      LP +  +
Sbjct: 61  LRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSAKTAFI-----LPDQLGQ 114

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           +E++       E+EL  E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E NIV
Sbjct: 115 EEVQ-------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNIV 165

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 166 YGRKDGKY 173

[124][TOP]
>UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1
          Length = 193

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 58/188 (30%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +S+  +QH+E K+ R+ +   YL R   V +          G    R +VT+      +V
Sbjct: 12  ISERQRQHIEQKLSRLDR---YLDRIAQVTVEHMEEMRRNEG-NVHRVQVTVVGDHGVLV 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE  A   Y +ID V   +QR++ + K+K   H R  +G  R +  +++  LP      
Sbjct: 68  RAERRAPELYAAIDEVYDTLQRQIERYKDK---HWR--RGKLRRQGGQIVEALP------ 116

Query: 209 EIEITPQKD-DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           E+      D  EEE    +VRTK F + P+   EA++Q+E++ H+F+ F++ +TG++N++
Sbjct: 117 ELAAPSLADTQEEEERPRIVRTKEFQVKPMYSDEAVEQMELLGHNFFIFQDADTGKLNVL 176

Query: 32  YKRKEGGY 9
           Y+R++G Y
Sbjct: 177 YRRQDGNY 184

[125][TOP]
>UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
           1_7_47FAA RepID=C5EVT1_9FIRM
          Length = 187

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++  +K  VE K+G++  +H +    EV V LS +   +        + EVT+  K +  
Sbjct: 23  VTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KIEVTIPVKGN-T 71

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE +   Y SIDLV  +I+R++R+ ++K  D     K    + FS+  +     +EE
Sbjct: 72  IRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAAISFSQAFI-----EEE 121

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           DE++     DDE +    +V+TK F + P    EA  Q+EM+ H FY F N +T ++N+V
Sbjct: 122 DEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHSFYVFLNADTDQVNVV 172

Query: 32  YKRKEGGY 9
           YKRK G Y
Sbjct: 173 YKRKNGTY 180

[126][TOP]
>UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC
           BAA-1163 RepID=A0NI00_OENOE
          Length = 190

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
 Frame = -2

Query: 566 SDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
           +DA+  +++   +K+   I + +  +  ++VR             +T + EVT+    + 
Sbjct: 14  TDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEVTIPLP-YL 63

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
            +RAEE     Y ++DLVS+ + R++RK K +     R  +G   + F+E I P+PS+  
Sbjct: 64  TLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAIDPVPSDTN 122

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
           ED+      K D       V+R K   + P+ + EA+ Q+EM+DHDF+ F N +T +++I
Sbjct: 123 EDK------KID-------VIRRKTLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQLDI 169

Query: 35  VYKRKEGGY 9
           VYKR +G Y
Sbjct: 170 VYKRDDGKY 178

[127][TOP]
>UniRef100_B9I248 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I248_POPTR
          Length = 115

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 52/105 (49%), Positives = 63/105 (60%), Gaps = 14/105 (13%)
 Frame = -2

Query: 326 RKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI---- 165
           RKLRKIK+KE+DHGRHMKG N+LK  E   P+    E D   ++ +KDD+  +EL     
Sbjct: 8   RKLRKIKDKESDHGRHMKGFNKLKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHL 64

Query: 164 --------EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54
                      V TKYFDMPPLTV EAI +L  VDH FY F + E
Sbjct: 65  VTIHSIISSNAVHTKYFDMPPLTVDEAIVRLGNVDHAFYGFGHAE 109

[128][TOP]
>UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD
          Length = 189

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
 Frame = -2

Query: 425 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKF 252
           E TL+     V++A E +E  Y SID +S  ++R++++ + ++ D  HGR       LK 
Sbjct: 59  ETTLFING-AVLKAREASEDMYASIDRMSDKLERQVKRYRGRQVDRWHGR-------LK- 109

Query: 251 SEVILPLPSEDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDF 75
                      E    E  P   +EEE IE  +VRTK F M P++  EA+ Q+E++DHDF
Sbjct: 110 ---------NHEGARAEPQPFVAEEEEDIEPRIVRTKQFQMKPMSAEEAVLQMELLDHDF 160

Query: 74  YAFRNEETGEINIVYKRKEGGY 9
           + F N +TG+IN+VY+R++G Y
Sbjct: 161 FVFTNADTGDINVVYRRRDGNY 182

[129][TOP]
>UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE
          Length = 180

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+G+ ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLGK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[130][TOP]
>UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
           13275 RepID=B6G1P8_9CLOT
          Length = 190

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 57/187 (30%), Positives = 99/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D +K + EDK+ ++     YL  + +V+++   G         ++ EV +       +
Sbjct: 20  LTDGIKGYTEDKLKKL---GKYLDEDTEVKVTVSAG------KNRQKVEVMIPNVNGHTI 70

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R EE  +  Y +IDLV   + R++ K K+K       + G   +++  +        EE 
Sbjct: 71  RVEEEQDNLYPAIDLVCDKLSRQIIKYKDK---FKTRVPGNFSIRYEGI--------EEL 119

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
             E+  + ++ E +IE   R K F++ P+++ EAI Q+ + DHDFY F++ E+ EI +VY
Sbjct: 120 AQELDYEVEEPEVVIE---RRKKFNLKPMSIEEAILQMNLTDHDFYMFKDRESFEICLVY 176

Query: 29  KRKEGGY 9
           KRKEGGY
Sbjct: 177 KRKEGGY 183

[131][TOP]
>UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1
           RepID=A6CQE4_9BACI
          Length = 189

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 59/187 (31%), Positives = 98/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++ HVE+K+G+ + ++     + DV ++ +   +     +  + EVT+    H V+
Sbjct: 13  VTPAIRDHVENKIGK-LNRYFNETPDADVHVNLKVYPD-----KKTKVEVTI-PMPHLVL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  E  Y +IDL+   ++R++RK K K     R    P     ++  L     +E  
Sbjct: 66  RAEERHEDMYAAIDLIVDKLERQIRKHKTKVNRKMREKGSPKEFFAAQEGLTTSQLNE-- 123

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                  K  E E  +EVVRTK F++ P+   EAI Q+ ++ H F+ F + ET   NIVY
Sbjct: 124 -------KARETEENDEVVRTKQFNLKPMDSEEAILQMNLLGHSFFIFTDAETNATNIVY 176

Query: 29  KRKEGGY 9
           KR++G Y
Sbjct: 177 KRRDGKY 183

[132][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
           27756 RepID=A5KKP2_9FIRM
          Length = 198

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++  +K+ +E K+G+ ++++     E+ V LS   G +        + EVT+  K   ++
Sbjct: 25  VTPGLKEAIEQKLGK-LERYFTPETEIIVTLSVEKGRQ--------KIEVTIPVKG-SII 74

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+LRK K K     +                +PS   + 
Sbjct: 75  RSEQTSSDMYVSIDLVEEVIERQLRKYKNKLVAKSQ----------GHPTAAVPSGSIKK 124

Query: 209 E-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           E IE   +  D++E+   +VRTK F + P+   +A  Q+E++ H F+ F N ET E+N+V
Sbjct: 125 EFIESDDESSDDDEI--RIVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAETDEVNVV 182

Query: 32  YKRKEGGY 9
           YKRK+G +
Sbjct: 183 YKRKDGSF 190

[133][TOP]
>UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Anaerocellum thermophilum DSM 6725
           RepID=B9MLV8_ANATD
          Length = 181

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 60/189 (31%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA+K+ +E K+ + ++++  L  +V V LS                EVT+    HG++
Sbjct: 12  VTDALKERIEKKLSK-LERYIKLNTDVHVTLSVEKISHI--------VEVTI--PFHGMI 60

Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
            RAEE +   Y +IDLV   ++R++RK K K            R K +E +  +  E EE
Sbjct: 61  LRAEERSNDMYSAIDLVVDTLERQIRKFKTKIA---------KRAKDAESLRYMTFELEE 111

Query: 212 DEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
                 P+K+ +EE  E  + +TK F + P++V EAI Q+ ++ H+F+ F N++T ++N+
Sbjct: 112 ------PEKEVQEENSEFRIAKTKRFPIKPMSVEEAILQMNLLGHNFFVFLNQDTDKVNV 165

Query: 35  VYKRKEGGY 9
           VY+R +G Y
Sbjct: 166 VYRRNDGAY 174

[134][TOP]
>UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus
           flavithermus WK1 RepID=B7GL70_ANOFW
          Length = 182

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 60/187 (32%), Positives = 98/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++++VE K+G+ ++++      V V ++ +   +     +  + EVT+   +  V+
Sbjct: 12  VTQAIREYVEKKIGK-LERYFESTEGVTVHVNLKVYND-----KQAKIEVTIPMPQI-VL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  +  Y +IDLV   ++R++RK K K     R  K  N +  +  +     E EE+
Sbjct: 65  RAEERHDDMYAAIDLVVDKLERQIRKHKTKVNRKMRE-KEANGVTLTATVPVATEEHEEE 123

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E E              VVRTK F + P+   EAI Q+ M+ H+FY F N ET   N+VY
Sbjct: 124 EFE--------------VVRTKRFSLKPMDSEEAILQMNMLGHNFYVFINAETNRTNVVY 169

Query: 29  KRKEGGY 9
           KRK+G Y
Sbjct: 170 KRKDGKY 176

[135][TOP]
>UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans
           ATCC 700633 RepID=D0BMS6_9LACT
          Length = 182

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 60/187 (32%), Positives = 103/187 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ + E K+ + ++K+   V    V ++ +   E     +T + EVT+    + V+
Sbjct: 13  VTEAIRNYAEKKLSK-LEKYFGDVANATVHVNLKVYTE-----KTAKVEVTIPLP-YLVL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE +   YGSIDLV   ++R++RK K K     R  KG     F   + P        
Sbjct: 66  RAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KG-----FDIPVAP-------- 111

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
              + P+  DE+E + E+VRTK  D+ P+   EA+ Q+ M+ H+F+ +++ ET E +IVY
Sbjct: 112 ---VVPEPVDEDESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIYQDAETNETHIVY 168

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 169 RRKDGKY 175

[136][TOP]
>UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7
           RepID=A8U6N5_9LACT
          Length = 180

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 61/186 (32%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
 Frame = -2

Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381
           A++ +VE KVG+V +K+   V E    ++ +   +     +T + EVT+    + V+RAE
Sbjct: 16  AIRSYVEKKVGKV-EKYFNDVPEATAHVNLKTYSD-----KTAKVEVTIPLP-YLVLRAE 68

Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP--LPSEDEEDE 207
           E +   YGS+DLVS  ++R++RK K K            R + S V++P  LP E++E  
Sbjct: 69  ETSPDLYGSVDLVSDKLERQMRKYKTKIN---------RRTRGSNVVVPPVLPGEEQESH 119

Query: 206 IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYK 27
                    E+E+   +VRTK   + P+   EA+ Q++M+ H+F+ F + +T   +IVY+
Sbjct: 120 ---------EDEV--NIVRTKRLSLKPMDSEEAVLQMDMLGHNFFIFEDADTNGTSIVYR 168

Query: 26  RKEGGY 9
           RK+G Y
Sbjct: 169 RKDGKY 174

[137][TOP]
>UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16
           RepID=Q5WDF7_BACSK
          Length = 184

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++ A+++++E KVG++ +        +V+V+L   G GE          EVT+   +  +
Sbjct: 12  VTPAIREYIEKKVGKLERYFDTTPTADVNVKLQVLGSGESS-------IEVTIPMPKL-L 63

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +R EE     Y +ID+V   ++R++RK K K     R  +G  +  F   + PL  E  E
Sbjct: 64  LRGEEINADMYAAIDIVVEKLERQIRKYKTKVNRKFRQ-EGSLKYMFKNELEPLRDEVAE 122

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           D+           EL  EVVRTK F++ P+   EAI Q++++ H+F+ F + E+G  N+V
Sbjct: 123 DD-----------EL--EVVRTKRFNLKPMDAEEAILQMDLLGHNFFVFSDAESGSTNVV 169

Query: 32  YKRKEGGY 9
           Y+RK+G Y
Sbjct: 170 YRRKDGKY 177

[138][TOP]
>UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
           ATCC 27560 RepID=A5Z528_9FIRM
          Length = 179

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 59/187 (31%), Positives = 99/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++ ++  VE+K+G+ + K+      VDV LS             ++ EVT+  K   ++
Sbjct: 12  VTEGIRSAVEEKIGK-LDKYFAEETRVDVTLSVN--------KNEQKVEVTIPVKGR-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE ++  Y SID+V   I+R+L K K K  D  + +K      F+E  +    EDE  
Sbjct: 62  RAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIKEA----FTETYIEADYEDE-- 115

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                    DE+++  ++ +TK F + P+   EA  ++E++ H+F+ F N ET E+N+VY
Sbjct: 116 ---------DEDQI--KIKKTKRFGIKPMDPEEACVEMELLGHNFFVFLNAETEEVNVVY 164

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 165 KRKGNTY 171

[139][TOP]
>UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305
           RepID=Y1964_STAS1
          Length = 190

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 56/188 (29%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ ++E+K+G++ +  + +      V++ T             + EVT+  K+   
Sbjct: 13  ITDAIRNYIEEKIGKLERYFNDVPNATAHVKVKTYQNS-------ATKIEVTIPLKKV-T 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE  +  Y  IDL+++ ++R++RK K +     R+ +G       E    LP E E 
Sbjct: 65  LRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN-RGEQ-----EAFASLPEEKEA 118

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
            EI+    + D E    E++R K F + P+   EA+ Q++++ HDF+ F + ET   +IV
Sbjct: 119 VEIQNDENEADNEI---EIIRAKNFSLKPMDSEEAVLQMDLLGHDFFIFTDRETDGTSIV 175

Query: 32  YKRKEGGY 9
           YKRK+G Y
Sbjct: 176 YKRKDGKY 183

[140][TOP]
>UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens
           RepID=Q8XIE9_CLOPE
          Length = 179

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 46/129 (35%), Positives = 76/129 (58%)
 Frame = -2

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           ++R EE  +  Y SIDLV   I+R++RK K + +   R+    + L+F+           
Sbjct: 60  LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH---------- 105

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
                I P +D +EE   ++V+TK FD+ P+   EA+ Q+E++ HDF+ F++ ET ++N+
Sbjct: 106 -----IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV 160

Query: 35  VYKRKEGGY 9
           VYKRK+G Y
Sbjct: 161 VYKRKDGNY 169

[141][TOP]
>UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens
           SM101 RepID=Q0SR10_CLOPS
          Length = 179

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 46/129 (35%), Positives = 76/129 (58%)
 Frame = -2

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           ++R EE  +  Y SIDLV   I+R++RK K + +   R+    + L+F+           
Sbjct: 60  LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH---------- 105

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
                I P +D +EE   ++V+TK FD+ P+   EA+ Q+E++ HDF+ F++ ET ++N+
Sbjct: 106 -----IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV 160

Query: 35  VYKRKEGGY 9
           VYKRK+G Y
Sbjct: 161 VYKRKDGNY 169

[142][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
           ATCC 33656 RepID=C4ZI34_EUBR3
          Length = 175

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 63/187 (33%), Positives = 99/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L++ +KQ VE+K+ + ++K      +V V LS     +        + EVT+  K H V+
Sbjct: 12  LTEGLKQAVEEKLSK-LEKFFKPDTDVYVTLSVEKDRQ--------KIEVTIPAKGH-VI 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+LRK + K +            K++  I       ++D
Sbjct: 62  RSEQVSNDMYVSIDLVEEVIERQLRKYRTKISAK----------KYAPAIF------QDD 105

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            +E     DD E+   ++VRTK F M P+   +A  Q+E+  HDF+ FRN E  E+N+VY
Sbjct: 106 FVEA----DDAEDEEIKIVRTKRFGMKPMYPEDACIQMELSGHDFFVFRNAENDEVNVVY 161

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 162 KRKGHTY 168

[143][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
           ATCC 27750 RepID=C4Z2Z4_EUBE2
          Length = 175

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 59/187 (31%), Positives = 97/187 (51%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++ +K  VE+K+G+ + +      EV+V LS             ++ EVT+  K + ++
Sbjct: 12  ITEGLKSAVEEKLGK-LDRFFAPETEVNVTLSVE--------KERQKIEVTIPVKGN-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+L+K K K  D     K  N   F++  +    +D+E 
Sbjct: 62  RSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD-----KQQNAAAFAQEFVEKDYDDDEV 116

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           +I                +RTK F + P+   EA  Q+E++ H+FY F N ET E+N+VY
Sbjct: 117 KI----------------IRTKRFGIKPMDPEEACVQMELLGHNFYVFFNSETEEVNVVY 160

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 161 KRKGNTY 167

[144][TOP]
>UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis
           NBRC 100599 RepID=C0Z6T8_BREBN
          Length = 185

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 55/184 (29%), Positives = 100/184 (54%)
 Frame = -2

Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381
           A++++VE KVGR ++K+    +  +V+++        RG  T    + L      ++RAE
Sbjct: 15  ALREYVEKKVGR-LEKYFETPQPTEVQVTMH----VHRGEGTIEVTIPLSGV---IIRAE 66

Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIE 201
           E  E  Y +IDLV   ++R++RK K K     R +    R+          ++ E   + 
Sbjct: 67  ETHEDMYAAIDLVVEKLERQIRKHKTKLMRKLR-VDSTGRI----------AQRESQPVA 115

Query: 200 ITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRK 21
           +     DEE++  ++VRTK FD+ P+   EA+ Q++M+ H F+ F+N +T ++++VY+R 
Sbjct: 116 VMIPDVDEEDIDIDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVFQNSDTNDVSVVYRRN 175

Query: 20  EGGY 9
           +G Y
Sbjct: 176 DGRY 179

[145][TOP]
>UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL
           B-14911 RepID=Q2B1U0_9BACI
          Length = 184

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 60/187 (32%), Positives = 100/187 (53%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++++VE K+ + ++K+     + +V ++ +            + EVT+   ++ V+
Sbjct: 12  VTPAIREYVEKKIAK-LEKYFTETPDANVHVNLKTYNN-----NRSKVEVTI-PMQNLVL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  E  Y +IDL+   ++R++RK K K     R  KG   L F+            D
Sbjct: 65  RAEEDHEDMYAAIDLIVDKLERQIRKHKTKVNRKFRE-KGSPTLMFASF----------D 113

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E E    ++++ +L  EVVR K FD+ P+   EAI Q+ ++ H FY F N ET   N+VY
Sbjct: 114 EPEAPVLEEEDNDL--EVVRQKSFDLKPMDNEEAILQMNLLGHSFYVFTNAETNRTNVVY 171

Query: 29  KRKEGGY 9
           KRK+G Y
Sbjct: 172 KRKDGRY 178

[146][TOP]
>UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Geobacillus RepID=C9RVC1_9BACI
          Length = 182

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 59/187 (31%), Positives = 104/187 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++++VE K+G+ ++++     +V+V ++ +   + G+G    + EVT+    H ++
Sbjct: 12  VTPALREYVEKKIGK-LERYFDRTDDVNVHVNLKVYND-GQG----KIEVTIPIP-HLLL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  E  Y +IDLV+  ++R++RK K K     R  +   +L     I    +E+EE+
Sbjct: 65  RAEERHEDMYAAIDLVTDKLERQIRKHKTKVNRKLRDREKEAKLAAPVSIGASAAENEEE 124

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                           E+VRTK+F + P+   EAI Q+ ++ H+F+ F N ET   NIVY
Sbjct: 125 F---------------EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 170 RRKDGKY 176

[147][TOP]
>UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
           RepID=B7IPV2_BACC2
          Length = 180

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVMDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[148][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
           15053 RepID=C0BYR7_9CLOT
          Length = 178

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 59/187 (31%), Positives = 99/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++  +++ VE K+G+ ++K+     E+ V LS             ++ EVT+  K + ++
Sbjct: 12  VTPGLRETVEHKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIEVTIPVKGN-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+LRK K K     RH +G N               E  
Sbjct: 62  RSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGN------------FRQEFF 107

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E E   + DDE +    +VRTK F + P+   +A  Q++++ HDF+ F N +T E+N+VY
Sbjct: 108 ESEYATEDDDEVK----IVRTKRFGIKPMYPEDACIQMDLLGHDFFVFCNADTDEVNVVY 163

Query: 29  KRKEGGY 9
           +RK G +
Sbjct: 164 RRKNGTF 170

[149][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
           ATCC 43243 RepID=B7AN97_9BACE
          Length = 179

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 59/187 (31%), Positives = 97/187 (51%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++D +K+ VE+K+G+ + +      EV V LS             ++ EVT+  K   ++
Sbjct: 15  VTDGLKEAVEEKLGK-LDRFFAPDTEVKVTLSVE--------KERQKIEVTIPVKG-SII 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+L+K K K  D     K  +   F++  +     D++ 
Sbjct: 65  RSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID-----KQQDAAAFAQEYIDKEYVDDDA 119

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           +++I              +RTK FD+ P+   EA  Q+E++ H FY F N ET +IN+VY
Sbjct: 120 DVKI--------------IRTKRFDVKPMDPEEACVQMELLGHSFYVFFNSETEQINVVY 165

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 166 KRKGNTY 172

[150][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
           29176 RepID=B5CNW3_9FIRM
          Length = 186

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 60/187 (32%), Positives = 99/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++  +K  +E K+G+ ++++     E++V LS   G +        + EVT+  K + ++
Sbjct: 12  VTPGLKDAIEQKLGK-LERYFTPETEINVTLSVEKGRQ--------KIEVTIPVKGN-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ ++  Y SIDLV  +I+R+LRK K K     R    P     S          E  
Sbjct: 62  RSEQTSDNMYVSIDLVEEVIERQLRKYKNKLV--ARSQGHPT----SYTSTGNSFRKEFF 115

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E E    +DDE +    +VRTK F + P+   +A  Q+E++ H F+ F N ET E+N+VY
Sbjct: 116 ETEDDAAEDDEIQ----IVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAETDEVNVVY 171

Query: 29  KRKEGGY 9
           KRK+G +
Sbjct: 172 KRKDGSF 178

[151][TOP]
>UniRef100_Q0TND9 Ribosomal subunit interface protein n=6 Tax=Clostridium perfringens
           RepID=Q0TND9_CLOP1
          Length = 179

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 46/129 (35%), Positives = 76/129 (58%)
 Frame = -2

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           ++R EE  +  Y SIDLV   I+R++RK K + +   R+    + L+F+           
Sbjct: 60  LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH---------- 105

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
                I P +D +EE   ++V+TK FD+ P+   EA+ Q+E++ HDF+ F++ ET ++N+
Sbjct: 106 -----IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV 160

Query: 35  VYKRKEGGY 9
           VYKRK+G Y
Sbjct: 161 VYKRKDGNY 169

[152][TOP]
>UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus
           agalactiae RepID=Q3CZ63_STRAG
          Length = 184

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 58/185 (31%), Positives = 104/185 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++++VE K+ +V +K+    +E+D R++ +   E     +T + EVT+       +
Sbjct: 13  VTEAIREYVETKLSKV-EKYFNEAQELDTRVNLKVYRE-----KTAKVEVTILIDSI-TL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+V           
Sbjct: 66  RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQVFTT-------- 112

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E E  P   DEE + + +VRTK  ++ P+ V EA+ Q+E++ HDF+ + + E    N++Y
Sbjct: 113 EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLY 169

Query: 29  KRKEG 15
           KR++G
Sbjct: 170 KREDG 174

[153][TOP]
>UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
           RepID=B5UPY3_BACCE
          Length = 180

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[154][TOP]
>UniRef100_B1SBZ3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
           subsp. infantarius ATCC BAA-102 RepID=B1SBZ3_9STRE
          Length = 182

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 56/185 (30%), Positives = 104/185 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ +VE K+G+ I+K+    +E+D R++ +   E     +T + EVT+       +
Sbjct: 13  VTDAIRNYVESKLGK-IEKYFNAEQELDARVNLKVYRE-----KTAKVEVTILVNSI-TL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV+  I+R++RK K K     R     +++          SE E +
Sbjct: 66  RAEDVSQDMYGSIDLVTDKIERQIRKNKTKIAKKHREKVPASQI--------FTSEFEAE 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            ++  P  +        VVRTK+  + P+ + EA+ Q++++ HDF+ + + E G  NI+Y
Sbjct: 118 PVDEGPAVN--------VVRTKHVSLKPMDLDEALLQMDLLGHDFFIYTDAEDGVTNILY 169

Query: 29  KRKEG 15
           +R++G
Sbjct: 170 RREDG 174

[155][TOP]
>UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis
           RepID=YVYD_BACSU
          Length = 189

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 57/187 (30%), Positives = 98/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A+K HVE K+G++ +   + V + DV ++ +   +     +  + EVT+       +
Sbjct: 12  VTPALKDHVERKIGKLERYFDHSV-DADVNVNLKFYND-----KESKVEVTI-PMTDLAL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E H E  Y +IDL ++ ++R++RK K K     R    P  L  + +           
Sbjct: 65  RSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFREQGSPKYLLANGL---------GS 115

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           + +I  Q D EEE   ++VR K F++ P+   EAI Q+ M+ H+F+ F N ET   N+VY
Sbjct: 116 DTDIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVFTNAETNLTNVVY 175

Query: 29  KRKEGGY 9
           +R +G Y
Sbjct: 176 RRNDGKY 182

[156][TOP]
>UniRef100_UPI00006DCB57 hypothetical protein CdifQ_04002839 n=1 Tax=Clostridium difficile
           QCD-32g58 RepID=UPI00006DCB57
          Length = 138

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 51/139 (36%), Positives = 81/139 (58%)
 Frame = -2

Query: 425 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 246
           EVT+      ++RAE+  +  Y +ID+V   + R++ K K K  D  ++ K    ++F  
Sbjct: 2   EVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN 58

Query: 245 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 66
           +   + +  E D+ +     DDEE+    + R K F++ P++  EAI Q+E+V H+FY F
Sbjct: 59  LDF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMF 113

Query: 65  RNEETGEINIVYKRKEGGY 9
           RN++  EINIVYKRK GGY
Sbjct: 114 RNQDNFEINIVYKRKAGGY 132

[157][TOP]
>UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus
           RepID=C2U573_BACCE
          Length = 180

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[158][TOP]
>UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group
           RepID=B7HEI9_BACC4
          Length = 180

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[159][TOP]
>UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW
          Length = 182

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 55/187 (29%), Positives = 106/187 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++++VE K+G+ ++++     ++ V ++ +   +     +  + EVT+   +  ++
Sbjct: 12  VTPALREYVEKKIGK-LERYFENTEDIHVHVNLKVYND-----KQGKIEVTIPMPQL-LL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  +  Y +IDLV+  ++R++RK K K            +L+  E    L +++   
Sbjct: 65  RAEERHDDMYAAIDLVADKLERQIRKHKTKVN---------RKLRNKETKQVLVTQNNNP 115

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
            +E    +++EEE   E+VRTK+F + P+   EAI Q+ ++ H+F+ F N ET   NIVY
Sbjct: 116 PVE----ENEEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 170 RRKDGKY 176

[160][TOP]
>UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Herpetosiphon aurantiacus ATCC 23779
           RepID=A9AY42_HERA2
          Length = 186

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLST-RGGGEFGRGPRTRRCEVTLYTKRH 399
           L DA K  +++K+G+ ++++   + +  V+ R  T RG GE      T   + TL     
Sbjct: 12  LHDAQKAFIQEKLGK-LERYLDGINDWKVECRFETLRGSGE------TYTVQATLLADHG 64

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSE 222
            ++RAEE     Y +++ V   +QR++R+ KEK      + +G  R    E+I  PLP+ 
Sbjct: 65  IILRAEERDRELYAAVEAVHDNLQRQIRRFKEKH-----YRRGKLRRTAGEIIAAPLPAL 119

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
            E          D E+    +++R K   + P+   EAI+Q+E++ H F+ FR+ ET +I
Sbjct: 120 PE----------DAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFRDAETEKI 169

Query: 41  NIVYKRKEGGY 9
            +VY+R +G Y
Sbjct: 170 QVVYRRNDGNY 180

[161][TOP]
>UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus
           agalactiae RepID=Q3DA79_STRAG
          Length = 184

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 58/185 (31%), Positives = 104/185 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++++VE K+ +V +K+    +E+D R++ +   E     +T + EVT+       +
Sbjct: 13  VTEAIREYVETKLSKV-EKYFNEEQELDTRVNLKVYRE-----KTAKVEVTILIDSI-TL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+V           
Sbjct: 66  RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQVFTT-------- 112

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E E  P   DEE + + +VRTK  ++ P+ V EA+ Q+E++ HDF+ + + E    N++Y
Sbjct: 113 EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLY 169

Query: 29  KRKEG 15
           KR++G
Sbjct: 170 KREDG 174

[162][TOP]
>UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY
          Length = 180

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     EV V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEVKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   ++R++RK K K     R    P     +  IL  P+   E
Sbjct: 61  LRAEETHSDMYAAIDLVVDKVERQIRKHKTKVNRKLREKGSPK----TAFILTEPAATLE 116

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           +       K+DE EL    VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 117 EV------KEDELEL----VRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[163][TOP]
>UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
           RepID=B7HX18_BACC7
          Length = 180

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDQLELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[164][TOP]
>UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
           DSM 16841 RepID=C0FTS3_9FIRM
          Length = 176

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 60/187 (32%), Positives = 99/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L++ +K  VEDK+ + ++K+     EV+V LS             ++ EVT+  K    +
Sbjct: 12  LTEGLKAAVEDKLNK-LEKYFTPDTEVNVTLSVE--------KERQKVEVTIPMKG-SYI 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+L+K + K     ++     +  F          DE+ 
Sbjct: 62  RSEQVSSDMYVSIDLVEEVIERQLKKYRTKLVTKQQNAAAVFKQDFL---------DEKS 112

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E        D+EE+  +++RTK FDM P+   +A  ++E++ HDFY F N ET ++N+VY
Sbjct: 113 E--------DDEEI--KIIRTKKFDMKPMYPEDACVEMELLGHDFYVFINAETEDVNVVY 162

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 163 KRKGNTY 169

[165][TOP]
>UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
           RepID=Q72XS8_BACC1
          Length = 180

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D+ EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[166][TOP]
>UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
           14662 RepID=B0MGZ9_9FIRM
          Length = 176

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 54/187 (28%), Positives = 103/187 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++ ++  +E+K+GR+     YL  ++D+ ++     E       ++ EVT+  K H ++
Sbjct: 12  VTEGIRAAIEEKLGRL---DKYLTDDIDIIVTLSVQKE------RQKIEVTIPMKGH-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ +   Y SIDLV  I++R++R+ K +              K+    L     D+++
Sbjct: 62  RAEQDSADMYVSIDLVIDILERQIRRYKTRLMSK----------KYEGAGLKQEFIDKDE 111

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           ++       DE+E+   ++R+K F + P+ V EA  Q++++ H+F+ FRN +T E+N+VY
Sbjct: 112 DV-------DEDEI--RIIRSKKFAIKPMDVEEACIQMDLLGHNFFVFRNADTFEVNVVY 162

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 163 KRKGNTY 169

[167][TOP]
>UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ
          Length = 182

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++++   K+ R+ +       E  V LS   G            EVT+     GV+
Sbjct: 12  VTEALREYAVKKISRLEKYFEAPASETTVTLSVTKG--------KHAVEVTIPLV--GVM 61

Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI--LPLPSED 219
            RAE+ +E  Y SID+V   ++R++RK K K     RH  G   L F E +    +   D
Sbjct: 62  LRAEDKSEDMYSSIDVVVDKLERQIRKHKTKMNRKFRHESGVKAL-FKEGLSQTAVSVMD 120

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           EEDE+E+              VRTK F + P+ V EAI Q+ MV H+F+ F N +  E+N
Sbjct: 121 EEDELEL--------------VRTKRFMLKPMDVEEAILQMNMVGHNFFVFSNIDNKEVN 166

Query: 38  IVYKRKEGGY 9
           +VYKR +G Y
Sbjct: 167 VVYKRSDGKY 176

[168][TOP]
>UniRef100_B5YF17 Ribosomal subunit interface protein n=1 Tax=Dictyoglomus
           thermophilum H-6-12 RepID=B5YF17_DICT6
          Length = 179

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG-V 393
           ++D ++Q+ E K+ R + +    +  ++V  S     ++  G +  R EVT+  K +G +
Sbjct: 12  ITDNLQQYAEKKLSR-LSRFFDNIENIEVLFSEE---DWKDGSKRHRVEVTI--KANGRI 65

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           ++A E  +    SIDLV   ++ +L+++KEK  D GR                      E
Sbjct: 66  IKASEANQDFRTSIDLVVDKLETQLKRLKEKLVDKGRRA--------------------E 105

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              EI  +K+ EE+   +VV+ K F + P+ V EAI Q+E++ HDF+ FR+ ET  I +V
Sbjct: 106 SIREILAEKEVEEK--PQVVKVKRFLLKPMDVEEAILQMELLGHDFFIFRDAETDRIGVV 163

Query: 32  YKRKEGGY 9
           YKRK+G Y
Sbjct: 164 YKRKDGKY 171

[169][TOP]
>UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI
          Length = 182

 Score = 84.0 bits (206), Expect = 7e-15
 Identities = 61/187 (32%), Positives = 107/187 (57%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++++VE K+G+ ++++      V V ++ +   + G+G    + EVT+    H ++
Sbjct: 12  VTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIPIP-HLLL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  +  Y +IDLV+  ++R++RK K K      + K  +R K  ++  P+P+     
Sbjct: 65  RAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPVPNGAAAA 119

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E       +DEE    E+VRTK+F + P+   EAI Q+ ++ H+F+ F N ET   NIVY
Sbjct: 120 E-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 170 RRKDGRY 176

[170][TOP]
>UniRef100_Q9CHS8 Putative uncharacterized protein ygdA n=1 Tax=Lactococcus lactis
           subsp. lactis RepID=Q9CHS8_LACLA
          Length = 185

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 55/187 (29%), Positives = 98/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ +VEDK+G+ + K+     EV   ++ +   E     +  + EVTL  K +  +
Sbjct: 13  VTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYSE-----KRAKVEVTLPAK-NVTL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  Y SID V   ++R++RK K +     R+   P    F +   PL   DE  
Sbjct: 66  RAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQAFGDEFAPLEKADEVA 124

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E  +            ++VRTK+  + P+   EA+ Q++M+ HDFY F + ++   ++VY
Sbjct: 125 EDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVY 172

Query: 29  KRKEGGY 9
           +R +G Y
Sbjct: 173 RRTDGRY 179

[171][TOP]
>UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
           RepID=Q8ENI5_OCEIH
          Length = 185

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 55/187 (29%), Positives = 102/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A+K++VE K+ + ++++       DV ++     +       +R EVT+    + ++
Sbjct: 12  VTGAIKEYVEKKISK-LERYFDSAPNTDVHVNLSVYND------EQRIEVTI-PMTNLLL 63

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R E      Y ++DLV   ++R++RK K K     R    P    F+E+         E 
Sbjct: 64  RGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHA-FAEM---------EK 113

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E  +   ++DE +L  E+VRTK F++ P+   EAI Q++M+ H+F+ F N+++GE N+VY
Sbjct: 114 EARLAEDEEDENQL--EIVRTKRFNLKPMDSEEAILQMDMLGHEFFVFTNDDSGETNVVY 171

Query: 29  KRKEGGY 9
           +R++G Y
Sbjct: 172 RRRDGKY 178

[172][TOP]
>UniRef100_B4U4G1 Ribosomal subunit interface protein n=1 Tax=Streptococcus equi
           subsp. zooepidemicus MGCS10565 RepID=B4U4G1_STREM
          Length = 182

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 59/185 (31%), Positives = 105/185 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ +VE K+ + I+K+  + +E+D R++ +   E     +T + EVT+       +
Sbjct: 13  VTEAIRDYVESKLTK-IEKYFVVEQEIDARVNLKVYRE-----KTAKVEVTI-PLGSVTL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+V     SE E +
Sbjct: 66  RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-----KMSTSQVFT---SEFEAE 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           + E TP+         +VVRTK   + P+ V EA  Q+E++ HDF+ + + E G  N++Y
Sbjct: 118 QAEETPEI--------KVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDAEDGATNVLY 169

Query: 29  KRKEG 15
           +R++G
Sbjct: 170 RREDG 174

[173][TOP]
>UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus
           thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN
          Length = 182

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 61/187 (32%), Positives = 107/187 (57%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++++VE K+G+ ++++      V V ++ +   + G+G    + EVT+    H ++
Sbjct: 12  VTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIPIP-HLLL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  +  Y +IDLV+  ++R++RK K K      + K  +R K  ++  P+P+     
Sbjct: 65  RAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPVPNGAAAV 119

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E       +DEE    E+VRTK+F + P+   EAI Q+ ++ H+F+ F N ET   NIVY
Sbjct: 120 E-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 170 RRKDGRY 176

[174][TOP]
>UniRef100_C6JQA9 Ribosome-associated protein Y n=1 Tax=Fusobacterium varium ATCC
           27725 RepID=C6JQA9_FUSVA
          Length = 183

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS---TRGGGEFGRGPRTRRCEVTLYTKRH 399
           ++DA+K++ E K+GRV + H  ++ E+DV LS   T+ G        +   EV  Y    
Sbjct: 12  VTDAIKKYAETKLGRVEKYHDSII-ELDVSLSAVRTKTGS-------SHTAEVLAYLSG- 62

Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
             ++A       Y +ID VS II+ +L+K KEK   +   + G  ++K++          
Sbjct: 63  STLKASCTDTDLYAAIDQVSDIIEAQLKKHKEKRAINYGQVPGVKKIKYNP--------- 113

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           E + +E        +E    VV+  Y    P+ + EAI QLE+++  FY F N ETGE+N
Sbjct: 114 ETNTVE--------KEAAVNVVKV-YLPPKPMDIEEAILQLELLNRVFYPFTNCETGEMN 164

Query: 38  IVYKRKEGGY 9
           IVYKRK+G Y
Sbjct: 165 IVYKRKDGDY 174

[175][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
           carteri f. nagariensis RepID=Q5MCR1_VOLCA
          Length = 232

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 39/96 (40%), Positives = 64/96 (66%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A+K++VE+KV + IQ  ++ ++EVDV LS RGG     G + ++ +VT++T R+GVV
Sbjct: 85  VTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQKVDVTIFTLRNGVV 144

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 282
           R E+     Y +IDLV   I+ KL ++KEK    G+
Sbjct: 145 RVEDRESNLYAAIDLVCDKIRSKLTRVKEKAITKGK 180

[176][TOP]
>UniRef100_Q030Z0 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Lactococcus lactis subsp. cremoris SK11
           RepID=Q030Z0_LACLS
          Length = 185

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 55/187 (29%), Positives = 99/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ +VEDK+G+ + K+     EV   ++ +   E     +  + EVTL  K +  +
Sbjct: 13  VTDAIRDYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVEVTLPAK-NVTL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  Y SID V   ++R++RK K +     R+   P    F +   PL + DE  
Sbjct: 66  RAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDEFAPLDTTDEVA 124

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E  +            ++VRTK+  + P+   EA+ Q++M+ HDFY F + ++   ++VY
Sbjct: 125 EDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVY 172

Query: 29  KRKEGGY 9
           +R +G Y
Sbjct: 173 RRTDGRY 179

[177][TOP]
>UniRef100_C0MH43 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Steptococcus equi subsp. zooepidemicus H70
           RepID=C0MH43_STRS7
          Length = 182

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 59/185 (31%), Positives = 105/185 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ +VE K+ + I+K+    +E+D R++ +   E     +T + EVT+       +
Sbjct: 13  VTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVEVTI-PLGSVTL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+V     SE E +
Sbjct: 66  RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-----KVSTSQVFT---SEFEAE 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           ++E TP+         +VVRTK   + P+ V EA  Q+E++ HDF+ + + E G  N++Y
Sbjct: 118 QVEETPEI--------KVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDAEDGATNVLY 169

Query: 29  KRKEG 15
           +R++G
Sbjct: 170 RREDG 174

[178][TOP]
>UniRef100_B9EAE7 Ribosomal subunit interface protein homolog n=1 Tax=Macrococcus
           caseolyticus JCSC5402 RepID=B9EAE7_MACCJ
          Length = 186

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVD--VRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
           ++DA++ ++E+K+ + ++++   V E +  V++ T   G+        + EVT+  K   
Sbjct: 13  VTDAIRNYIEEKLSK-LERYFTNVPEANAHVKIKTYQDGK-------SKVEVTIPLK-DV 63

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
            +RAEE     Y +++L+   ++R++RK K K     R  KG     F  +    P E++
Sbjct: 64  TLRAEERHNDLYAAVNLIVEKLERQIRKHKTKVNRKFRE-KGVKNDIFPVLPGTEPEEEK 122

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
            DEIEI              +R+K F + P+   EA+ Q+ M+ HDF+ F + ET E NI
Sbjct: 123 GDEIEI--------------IRSKQFALKPMDAEEAVLQMNMLGHDFFIFNDRETNETNI 168

Query: 35  VYKRKEGGY 9
           VYKRK+G Y
Sbjct: 169 VYKRKDGKY 177

[179][TOP]
>UniRef100_A9BI17 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Petrotoga mobilis SJ95 RepID=A9BI17_PETMO
          Length = 199

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 53/194 (27%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGR---VIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRH 399
           L++A++ ++E ++ +   +++KH  +V   DVR++   G          + E+T +    
Sbjct: 12  LTEALENYIEKRMSKPDHLLKKHPDIVSPSDVRITKERG--------IYKVEITTHINPL 63

Query: 398 G-VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-----ETDHGRHMKGPNRLKFSEVIL 237
             +++ EE +   Y +ID V+  ++RK+RK+K +      TD    M+    L+  ++  
Sbjct: 64  SKIIKVEERSNDLYEAIDEVTDSLERKIRKLKNRLQEQSRTDKKARMEIEQNLQNPDIKN 123

Query: 236 PLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNE 57
              +E+ E EIE  P          ++VRTK FD+  ++V EA+ Q++++ H F+ FRN 
Sbjct: 124 LDLAEENESEIEEKPDAP-------KIVRTKNFDLTLMSVEEAMLQMQLLGHSFFVFRNP 176

Query: 56  ETGEINIVYKRKEG 15
           +   I+++Y+RK+G
Sbjct: 177 DNDAISVLYERKDG 190

[180][TOP]
>UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Bacillus cereus group RepID=A9VQA3_BACWK
          Length = 180

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[181][TOP]
>UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
           salivarius ATCC 11741 RepID=C2EGB2_9LACO
          Length = 184

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 52/144 (36%), Positives = 82/144 (56%)
 Frame = -2

Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261
           +T + EVT+    + V+RAEE +   Y SIDLV+  ++R++RK K K     R  KG   
Sbjct: 50  KTAKVEVTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKN 107

Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81
            +F+      P  DE++E+E         +   E+VRTK   + P+   EA+ Q++M+ H
Sbjct: 108 FEFA------PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGH 152

Query: 80  DFYAFRNEETGEINIVYKRKEGGY 9
           DF+ + + E G INIVY+R++G Y
Sbjct: 153 DFFIYEDAENGGINIVYRRRDGRY 176

[182][TOP]
>UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
           RepID=C0FKQ0_9CLOT
          Length = 175

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 56/142 (39%), Positives = 77/142 (54%)
 Frame = -2

Query: 434 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 255
           ++ EVT+  K H ++RAEE +   Y SIDLV  II+R+L+K K K  D     K    + 
Sbjct: 48  QKIEVTIPVKGH-IIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLID-----KKQAPVD 101

Query: 254 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 75
           FSE+ +   SE + DEI+I               + K F M P+   EA  Q+E++ H F
Sbjct: 102 FSELFVQEESEPD-DEIKIE--------------KVKKFAMKPMDPEEACVQMELLGHSF 146

Query: 74  YAFRNEETGEINIVYKRKEGGY 9
           Y F N ET E+N+VYKRK   Y
Sbjct: 147 YVFLNAETEEVNVVYKRKGHTY 168

[183][TOP]
>UniRef100_Q5M196 Ribosomal subunit interface protein, ribosomal protein S30AE family
           n=2 Tax=Streptococcus thermophilus RepID=Q5M196_STRT1
          Length = 182

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 62/187 (33%), Positives = 103/187 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ +VE K+ +V +K+ +  +E+  R++ +   E     +T + EVT+ T     +
Sbjct: 13  VTEALRDYVESKLSKV-EKYFHEDQELHARVNLKVYRE-----KTAKVEVTIPTGSV-TL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ +   YGSIDLV   I R++RK K K     R  K P    FS       +E  ++
Sbjct: 66  RAEDVSLDMYGSIDLVVDKIARQIRKNKTKIARKYRE-KVPTGEMFS-------TEFNKE 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E+E  P          EVVRTK  ++ P+ V EAI Q+E++ HDF+ + + E    N++Y
Sbjct: 118 EVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIYTDSEDHTTNVLY 169

Query: 29  KRKEGGY 9
           KR++G Y
Sbjct: 170 KREDGNY 176

[184][TOP]
>UniRef100_C5WIE9 Ribosome-associated factor Y n=1 Tax=Streptococcus dysgalactiae
           subsp. equisimilis GGS_124 RepID=C5WIE9_STRDG
          Length = 182

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 59/185 (31%), Positives = 105/185 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ +VE K+ + I+K+    +E+D R++ +   E     ++ + EVT+       +
Sbjct: 13  VTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KSSKVEVTI-PLGSVTL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV   I+R++RK K K     R  K P    F+       +E E +
Sbjct: 66  RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-------TEFEAE 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           +++ TP+         +VVRTK   + P+ V EA  Q+E++ HDF+ + + E GE NI+Y
Sbjct: 118 QVDETPEV--------KVVRTKNLTLKPMDVEEARLQMELLGHDFFIYTDAEDGETNILY 169

Query: 29  KRKEG 15
           +R++G
Sbjct: 170 RREDG 174

[185][TOP]
>UniRef100_A2RIX0 Putative Sigma 54 modulation protein n=2 Tax=Lactococcus lactis
           RepID=A2RIX0_LACLM
          Length = 185

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 55/187 (29%), Positives = 99/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ +VEDK+G+ + K+     EV   ++ +   E     +  + EVTL  K +  +
Sbjct: 13  VTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVEVTLPAK-NVTL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  Y SID V   ++R++RK K +     R+   P    F +   PL + DE  
Sbjct: 66  RAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDEFAPLDTTDEVA 124

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E  +            ++VRTK+  + P+   EA+ Q++M+ HDFY F + ++   ++VY
Sbjct: 125 EDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVY 172

Query: 29  KRKEGGY 9
           +R +G Y
Sbjct: 173 RRTDGRY 179

[186][TOP]
>UniRef100_C7G8P2 Ribosomal subunit interface protein n=1 Tax=Roseburia intestinalis
           L1-82 RepID=C7G8P2_9FIRM
          Length = 176

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 56/187 (29%), Positives = 95/187 (50%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D +K  VEDK+ ++     Y   + DV ++     E       ++ EVT+  K +  +
Sbjct: 12  LTDGIKDAVEDKLNKL---EKYFTPDTDVYVTLSVEKE------RQKVEVTIPMKGN-YI 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+L+K + K     +      +  F +            
Sbjct: 62  RSEQVSNDMYVSIDLVEEVIERQLKKYRTKLVTKQQSAASVFKQDFLDAA---------- 111

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                   DD+EE+  +++R+K FDM P+   +A  Q+E++ HDF+ F N ET ++N+VY
Sbjct: 112 -------SDDDEEI--KIIRSKKFDMKPMYPEDACVQMELLGHDFFVFINAETEDVNVVY 162

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 163 KRKGNTY 169

[187][TOP]
>UniRef100_C5QVF5 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
           epidermidis W23144 RepID=C5QVF5_STAEP
          Length = 189

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ ++E+KVG++ +  + +   V  VR+ T           T + EVT+  K    
Sbjct: 13  ITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKIEVTIPLK-DVT 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE  +  Y  IDL+++ ++R++RK K +     R  +G   +  +EV          
Sbjct: 65  LRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQDIFVAEV---------- 113

Query: 212 DEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
            E     Q DD E E   E++R+K F + P+   EA+ Q+ ++ HDF+ F + ET   +I
Sbjct: 114 QESTANNQADDIESENDIEIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSI 173

Query: 35  VYKRKEGGY 9
           VY+RK+G Y
Sbjct: 174 VYRRKDGKY 182

[188][TOP]
>UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
           epidermidis M23864:W1 RepID=C5QQC2_STAEP
          Length = 191

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 52/188 (27%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ ++E+K+G++ +  + +   V  V++ T             + EVT+  K    
Sbjct: 13  ITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-DVT 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE  +  Y  IDL+++ ++R++RK K +     R  +G   +  +EV      E   
Sbjct: 65  LRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAEV-----QEATP 118

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           +E+    + D++ ++  E++R+K F + P+   EA+ Q+ ++ HDF+ F + ET   +IV
Sbjct: 119 EEVSGAEEPDNDSDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 176

Query: 32  YKRKEGGY 9
           Y+RK+G Y
Sbjct: 177 YRRKDGKY 184

[189][TOP]
>UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196
           RepID=C2SSP0_BACCE
          Length = 180

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[190][TOP]
>UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
           RepID=C2Q3D0_BACCE
          Length = 180

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   I+R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[191][TOP]
>UniRef100_C2HJY8 Ribosome-associated inhibitor A n=1 Tax=Finegoldia magna ATCC 53516
           RepID=C2HJY8_PEPMA
          Length = 179

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 58/187 (31%), Positives = 91/187 (48%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D +KQ  E K+ ++     Y   E   R+       F +     R EVT+   +  V+
Sbjct: 12  LTDDLKQMAESKLHKL---DKYFHDEQQARVV------FKKEKDKARVEVTMILDKGVVL 62

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  E    +ID V   + R++RK K K     +     N ++F              
Sbjct: 63  RAEESNEDIKTAIDKVEDALARQIRKHKTKLQ---KRFTESNSIRF-------------- 105

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
             E   + +D+E  I  +V+TK F + P+   EAI Q+E++DHDF+ F + +T  +N+VY
Sbjct: 106 --EAVEENNDKEIPIGAIVKTKEFGIKPMDKEEAIMQMELIDHDFFVFLDSKTNNVNVVY 163

Query: 29  KRKEGGY 9
           KRK+G Y
Sbjct: 164 KRKDGNY 170

[192][TOP]
>UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
           DSM 10507 RepID=C0CJV5_9FIRM
          Length = 175

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 60/187 (32%), Positives = 100/187 (53%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++D ++  VEDK+G+ ++++     E+ V LS     +        + EVT+  K + ++
Sbjct: 12  VTDGLRTAVEDKLGK-LERYFTPDTEIIVTLSVEKSRQ--------KIEVTIPVKGN-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+LRK K K  D  +   G +   F +  +    E EED
Sbjct: 62  RSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVD--KEKAGDH---FQKAFIEKEYE-EED 115

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E++I               RTK FD+ P+   +A  Q+E++ H+F+ F N ET ++N+VY
Sbjct: 116 EVKIQ--------------RTKKFDIKPMYPEDACVQMELLGHNFFVFCNAETDQVNVVY 161

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 162 KRKGNTY 168

[193][TOP]
>UniRef100_B6FRG1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
           1787 RepID=B6FRG1_9CLOT
          Length = 178

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 59/187 (31%), Positives = 97/187 (51%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++  +K  +E K+G+ ++++     E+ V LS             ++ EVT+  K H ++
Sbjct: 12  VTPGLKSTIEQKLGK-LERYFTPDTEIIVTLSVE--------KERQKIEVTIPVKGH-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ ++  Y SIDLV  +I+R+LRK K K     R  +G N             + E  
Sbjct: 62  RSEQVSDDMYVSIDLVEEVIERQLRKYKNKLI--ARQQEGGN------------FQSEFF 107

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E E     +DE ++I    RTK F + P+   +A  Q+E++ H+F+ F N ET E+N+VY
Sbjct: 108 EAEQDTSNNDEIKII----RTKRFGIKPMFPEDACVQMELLGHNFFVFSNAETDEVNVVY 163

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 164 KRKNNTY 170

[194][TOP]
>UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26
           Tax=Bacillus cereus group RepID=A0RKX8_BACAH
          Length = 180

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[195][TOP]
>UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus
           subsp. carnosus TM300 RepID=Y400_STACT
          Length = 188

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ ++EDKVG+ ++++   V  V+  +  +          + + EVT+       +
Sbjct: 13  ITDAIRNYIEDKVGK-LERYFTNVPNVNAHVKVKTYAN-----SSTKIEVTI-PLNDVTL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSEDEE 213
           RAEE  +  Y  IDL+++ ++R++RK K +           NR K  E    P P+  E 
Sbjct: 66  RAEERNDDLYAGIDLITNKLERQVRKYKTRV----------NRKKRKESEHEPFPATPET 115

Query: 212 D-EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
             E  +   KDDE E+I    R+K F + P+   EA+ Q++++ HDF+ F + ET   +I
Sbjct: 116 PPETAVDHDKDDEIEII----RSKQFSLKPMDSEEAVLQMDLLGHDFFIFNDRETDGTSI 171

Query: 35  VYKRKEGGY 9
           VY+RK+G Y
Sbjct: 172 VYRRKDGKY 180

[196][TOP]
>UniRef100_C5CEL9 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEL9_KOSOT
          Length = 178

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQK-HSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++D +K+H++ K+ +V +         +DVR+    G          + E+T +     V
Sbjct: 12  VTDTMKEHIDKKLAKVFRAIDEDHFTSMDVRVMKERG--------LYKVEITGHLPGF-V 62

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           VR EE  +  YG ++ +++ ++R++++ KE+     RH      +               
Sbjct: 63  VRVEERGDDFYGVVEAIANTLERRIKRYKERA--RMRHRASAKEI--------------- 105

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
             +E  P+  DEEE   ++ RTK F + P+ + EA+ Q+EM+ H F+ FRN +T E+N++
Sbjct: 106 --LEAIPEVPDEEERGLQITRTKRFSIKPMKIDEALLQMEMLGHTFFVFRNVDTDEVNVL 163

Query: 32  YKRKEG 15
           Y RK G
Sbjct: 164 YLRKNG 169

[197][TOP]
>UniRef100_B9DV32 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Streptococcus uberis 0140J RepID=B9DV32_STRU0
          Length = 182

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 61/185 (32%), Positives = 102/185 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ +VE K+ + I+K+     E+D R++ +   E     +T + EVT+      ++
Sbjct: 13  VTEAIRDYVEAKLAK-IEKYFVEDSEIDTRVNLKVYRE-----KTAKVEVTIILGSM-IL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV   I+R++RK K K     R  K P    F        SE E +
Sbjct: 66  RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFR-------SEFETE 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E+E        E    +VVRTK   + P+ V EA  Q+E++ HDF+ + + E GE N++Y
Sbjct: 118 EVE--------EGSEVKVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGETNVLY 169

Query: 29  KRKEG 15
           +R++G
Sbjct: 170 RREDG 174

[198][TOP]
>UniRef100_B1YLH2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLH2_EXIS2
          Length = 187

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 59/187 (31%), Positives = 97/187 (51%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA+K +VE K+ ++ +  +         ++ +   E       ++ EVT+    + ++
Sbjct: 12  VTDALKDYVEKKLEKLTRYFTTPTEAQTAYVNLKVNNE------KQKVEVTI-PMPNLLL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+     Y +IDLV   ++R++RK K K    GR   G     F  +        E  
Sbjct: 65  RAEDVNGDMYAAIDLVVDKLERQIRKHKTKINRRGRAKDGGIGEYFKTL--------EGP 116

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E E    ++DE EL  E+VRTK F + P+   EAI Q++M+ H F+ F + ETG  N+VY
Sbjct: 117 EAEAPVYEEDEAEL--ELVRTKRFTLKPMDTEEAILQMDMLGHTFFVFSDAETGNTNVVY 174

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 175 RRKDGRY 181

[199][TOP]
>UniRef100_C6QNN3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNN3_9BACI
          Length = 183

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 58/191 (30%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++++VE K+G+ ++++      + V ++ +   +     +  + EVT+   +  ++
Sbjct: 12  VTPALREYVEKKIGK-LERYFENTENIHVHVNLKVYND-----KQGKIEVTIPMPQL-LL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKET----DHGRHMKGPNRLKFSEVILPLPSE 222
           RAEE  +  Y +IDLV+  ++R++RK K K      D  + +K     + + V    P+E
Sbjct: 65  RAEERHDDMYAAIDLVADKLERQIRKHKTKVNRKLRDRDKEVK-----QVATVQTNAPAE 119

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
           D E           EEE   E+VRTK+F + P+   EAI Q+ ++ H+F+ F N ET   
Sbjct: 120 DNE-----------EEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRT 166

Query: 41  NIVYKRKEGGY 9
           NIVY+RK+G Y
Sbjct: 167 NIVYRRKDGKY 177

[200][TOP]
>UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
           RepID=C2ZFA1_BACCE
          Length = 180

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[201][TOP]
>UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271
           RepID=C2YZ14_BACCE
          Length = 180

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[202][TOP]
>UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44
           RepID=C2WEE0_BACCE
          Length = 180

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++VE K+ + ++++     E+ V L              +R EVT+ +T    +
Sbjct: 12  VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYS--------EKQRVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   I+R++RK K K     R    P              E +E
Sbjct: 61  LRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLREKGSPKTTFILTESAATLEEVKE 120

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           D++E+              VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 121 DDLEL--------------VRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[203][TOP]
>UniRef100_C2LQ50 Ribosomal subunit interface protein, ribosomal protein S30AE family
           n=1 Tax=Streptococcus salivarius SK126
           RepID=C2LQ50_STRSL
          Length = 182

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 60/187 (32%), Positives = 104/187 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ +VE K+ +V +K+    +E++ R++ +   E     +T + EVT+ T     +
Sbjct: 13  VTEALRDYVESKLSKV-EKYFNEDQELNARVNLKVYRE-----KTAKVEVTIPTGSV-TL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV   I+R++RK K K     R  K P    FS       ++   +
Sbjct: 66  RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIARKHRE-KVPTGEVFS-------ADFNNE 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           ++E  P          EVVRTK  ++ P+ V EAI Q+E++ HDF+ + + E    N++Y
Sbjct: 118 QVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIYTDSEDHTTNVLY 169

Query: 29  KRKEGGY 9
           KR++G Y
Sbjct: 170 KREDGNY 176

[204][TOP]
>UniRef100_A5ZRI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
           29174 RepID=A5ZRI8_9FIRM
          Length = 175

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 60/187 (32%), Positives = 96/187 (51%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +S  +K  VEDK+G+ ++++     EV V LS             ++ EVT+  K + ++
Sbjct: 12  VSQGLKTAVEDKLGK-LERYFTPDTEVVVTLSVE--------KERQKIEVTIPMKGN-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  +I+R+LRK K K  D     K      F +  L         
Sbjct: 62  RSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQKEYL--------- 107

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                  KD EE+   +++RTK F + P+   +A  Q+E++ H+F+ F N ET ++N+VY
Sbjct: 108 ------DKDYEEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVFFNAETEQVNVVY 161

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 162 KRKGNTY 168

[205][TOP]
>UniRef100_UPI0001789185 sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789185
          Length = 188

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 67/190 (35%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA+K +V+ K+ R       L +  D   ++ G             EVT+     GVV
Sbjct: 12  VTDALKDYVDKKLSR-------LDKYFDAPPTSEGYVTLSVIRGLHTVEVTIPLT--GVV 62

Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK--FSEVILPLPSED 219
            RAE+ ++  Y SID V   ++R++RK K K     R +K    LK   +E      S+ 
Sbjct: 63  LRAEDRSDDMYASIDAVVDKLERQIRKHKTKLN---RKIKQEGGLKTLIAENGAAATSQV 119

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           + +++E      DE+E   EVVRTK F M P+ V EAI Q+ MV H+F+ F N +T E+N
Sbjct: 120 DAEQVEY-----DEDEY--EVVRTKRFTMKPMDVEEAILQMNMVGHNFFVFSNIDTQEVN 172

Query: 38  IVYKRKEGGY 9
           +VYKR +G Y
Sbjct: 173 VVYKRDDGKY 182

[206][TOP]
>UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans
           RepID=Q9K6W6_BACHD
          Length = 187

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++ A++++VE KVG++ +      V +V+VR+                 EVT+   R  +
Sbjct: 12  VTPALREYVEKKVGKLERYFDTTPVADVNVRMQVLNNLHI--------IEVTIPMSRL-L 62

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   ++R++RK K K     R  +G  +  F   + P+    EE
Sbjct: 63  LRAEEKHSDMYAAIDLVIEKLERQIRKHKTKVNRKFRQ-EGSLKYMFKNDLEPMDGMREE 121

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
             +E      +E++L  +VVR K F++ P+   EAI Q++M+ H+F+ F N  +G+ N+V
Sbjct: 122 ILLE------EEDDL--QVVRKKRFNLKPMDTEEAILQMDMLGHNFFVFSNAISGDTNVV 173

Query: 32  YKRKEGGY 9
           Y+RK+G Y
Sbjct: 174 YRRKDGKY 181

[207][TOP]
>UniRef100_C4W9L5 Ribosomal subunit interface protein n=1 Tax=Staphylococcus warneri
           L37603 RepID=C4W9L5_STAWA
          Length = 191

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 53/188 (28%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ ++E+K+G++ +  + +   V  V++ T           T + EVT+  K    
Sbjct: 13  ITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------TTKVEVTIPLK-DVT 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE  +  Y  +DL+++ ++R++RK K +     R  +G   +  +EV      E   
Sbjct: 65  LRAEERHDDLYAGVDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAEV-----QEAPP 118

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           +EI    + +D +    E++R+K F + P+   EA+ Q+ ++ HDF+ F + ET   +IV
Sbjct: 119 EEISGAEENNDNDI---EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 175

Query: 32  YKRKEGGY 9
           Y+RK+G Y
Sbjct: 176 YRRKDGKY 183

[208][TOP]
>UniRef100_C4L5L1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Exiguobacterium sp. AT1b RepID=C4L5L1_EXISA
          Length = 187

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 59/187 (31%), Positives = 96/187 (51%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A+K +VE K+ ++ +   Y     D + +      +      ++ EVT+    + ++
Sbjct: 12  VTPAIKDYVEKKLEKLTR---YFTTPTDAQTAYVNLKVYNE---KQKVEVTI-PMPNLLL 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+     Y +IDLV   ++R++RK K K    GR  +G       E    L   D+  
Sbjct: 65  RAEDINLDMYAAIDLVVDKLERQIRKHKTKLNRKGRGKEGG----VGEYFKSLEGPDD-- 118

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
               TP   DE+E   E+VRTK F + P+   EAI Q++M+ H F+ F + ETG  N+VY
Sbjct: 119 ----TPAVYDEDEAELELVRTKRFTLKPMDTEEAILQMDMLGHSFFVFSDAETGNTNVVY 174

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 175 RRKDGKY 181

[209][TOP]
>UniRef100_C0M6F8 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Streptococcus equi subsp. equi 4047
           RepID=C0M6F8_STRE4
          Length = 182

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 59/185 (31%), Positives = 104/185 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ +VE K+ + I+K+    +E+D R++ +   E     +T + EVT+       +
Sbjct: 13  VTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVEVTI-PLGSVTL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV   I+R++RK K K     R      ++  S+V     SE E +
Sbjct: 66  RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-----KMSTSQVFT---SEFEAE 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           + E TP+         +VVRTK   + P+ V EA  Q+E++ HDF+ + + E G  N++Y
Sbjct: 118 KAEETPEI--------KVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDAEDGATNVLY 169

Query: 29  KRKEG 15
           +R++G
Sbjct: 170 RREDG 174

[210][TOP]
>UniRef100_B7A6F1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermus
           aquaticus Y51MC23 RepID=B7A6F1_THEAQ
          Length = 186

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQ-KHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ +VE K+ R+ + ++  L+ +V + L+     E     +  + EV L     G+
Sbjct: 13  ITDAIRDYVEKKLSRLDRYQNGELMAKVVLSLAGSPHVE-----KRAKAEVQLDLPG-GL 66

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM-KGPNRLKFSEVILPLPSEDE 216
           +R EE  +  Y +ID +   ++ +L++ KE+     RH  +GP          P P   +
Sbjct: 67  LRVEEEDQDLYAAIDRMVDRLEIQLKRYKERRFVGRRHTYQGP----------PPPEVRD 116

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
            + +     +  EEE    +VR K F+M P+   EA+ Q+E + HDF+ FRN +T EIN+
Sbjct: 117 MEAL-----RKPEEEEGPRIVRVKRFEMKPMDPEEAVFQMEALGHDFFVFRNAKTDEINV 171

Query: 35  VYKRKEGGY 9
           VY+RK+G Y
Sbjct: 172 VYRRKDGNY 180

[211][TOP]
>UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7GE66_PHATR
          Length = 209

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 67/194 (34%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQK--HSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
           L+ A+ +HV  ++G  I K   +  ++E DV LS     +   G    R EV    K   
Sbjct: 22  LTPALVEHVNKRIGGQINKLASNGAIQECDVILSVSKNPKVKNG---HRVEVVTNLKGTS 78

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSEVILPLPSE 222
           ++   E  +  Y SID  S  + RKL K K+      HG    G + +   EV+     E
Sbjct: 79  IICHNESPDM-YASIDAASHALYRKLCKYKDNRVAGWHGGEKMGNDIM---EVL-----E 129

Query: 221 DEEDEIEITPQKDDEEELIEE---VVRTKYFDMP-PLTVFEAIDQLEMVDHDFYAFRNEE 54
           + ED  E T     EE +  E   + + K FD+  P++V EA+  L+ +DHDFY FRN E
Sbjct: 130 NLEDVSEYTATPVAEEYVDPEAPTITKVKNFDLTKPMSVQEAVFALDYIDHDFYVFRNAE 189

Query: 53  TGEINIVYKRKEGG 12
           T EI++VYKR  GG
Sbjct: 190 TNEISVVYKRHVGG 203

[212][TOP]
>UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus
           RepID=Y704_STAAB
          Length = 190

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 52/188 (27%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ ++E+K+G++ +  + +   V  V++ T             + EVT+  K +  
Sbjct: 13  ITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-NVT 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE  +  Y  IDL+++ ++R++RK K +     R  +G   +  +E+        E 
Sbjct: 65  LRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAEL-------QEM 116

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
            E ++     D+ E+  E++R+K F + P+   EA+ Q+ ++ HDF+ F + ET   +IV
Sbjct: 117 QETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETDGTSIV 174

Query: 32  YKRKEGGY 9
           Y+RK+G Y
Sbjct: 175 YRRKDGKY 182

[213][TOP]
>UniRef100_Q5HQX7 Uncharacterized protein SERP0419 n=3 Tax=Staphylococcus epidermidis
           RepID=Y419_STAEQ
          Length = 189

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 54/188 (28%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ ++E+KVG++ +  + +   V  VR+ T           T + EVT+  K    
Sbjct: 13  ITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKIEVTIPLK-DVT 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE  +  Y  IDL+++ ++R++RK K +   + +H    ++  F   +    + +  
Sbjct: 65  LRAEERHDDLYAGIDLITNKLERQVRKYKTRV--NRKHRDRGDQDIFVAEVQESTTNNHA 122

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           D+IE       E ++  E++R+K F + P+   EA+ Q+ ++ HDF+ F + ET   +IV
Sbjct: 123 DDIE------SENDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 174

Query: 32  YKRKEGGY 9
           Y+RK+G Y
Sbjct: 175 YRRKDGKY 182

[214][TOP]
>UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM
           20583 RepID=C9L411_RUMHA
          Length = 176

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 60/187 (32%), Positives = 97/187 (51%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++  ++  VEDK+G+ ++K+     E+ V LS             ++ EVT+  K + ++
Sbjct: 12  VTQGLRSAVEDKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIEVTIPVKGN-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R+E+ +   Y SIDLV  II+R+LRK K K  D  +      + +F E       + EED
Sbjct: 62  RSEQVSSDMYVSIDLVEEIIERQLRKYKNKIID--KKQSAGFQPEFVE------KDYEED 113

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
             EI            +++RTK F   P+   +A  Q+E++ H+F+ F N ET E+N+VY
Sbjct: 114 TNEI------------KIIRTKKFGFKPMYPEDACVQMELLGHNFFVFLNAETEEVNVVY 161

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 162 KRKGNTY 168

[215][TOP]
>UniRef100_C5R7Z6 Ribosome-associated inhibitor protein Y n=1 Tax=Weissella
           paramesenteroides ATCC 33313 RepID=C5R7Z6_WEIPA
          Length = 238

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 58/191 (30%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQ----KHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKR 402
           ++DA+ +++E ++ R+ +    + SY+ R V+VR    G         T + EVT+    
Sbjct: 61  ITDAMSEYIEKRISRLERYLNTEASYIAR-VNVRSYKEG---------TFKTEVTIQLP- 109

Query: 401 HGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE 222
           + ++RAE+     Y ++D VS  ++R++RK K K     R  KG   L+ ++ +   P+ 
Sbjct: 110 YLLLRAEDTQTDMYQTVDFVSDKLERQIRKYKTKVNRKSRE-KGYKGLENTDFMAVDPAA 168

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
             E+     P+ +D+     E+VRTK+ D+ P+ V EA+ Q+E++ H+F+ F++ ET   
Sbjct: 169 AVEE-----PEPEDDGL---EIVRTKHVDLKPMDVEEAVLQMELLGHEFFIFQDAETDLP 220

Query: 41  NIVYKRKEGGY 9
            +VYKR++G Y
Sbjct: 221 AVVYKRRDGKY 231

[216][TOP]
>UniRef100_B7DUH5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Alicyclobacillus acidocaldarius LAA1
           RepID=B7DUH5_9BACL
          Length = 180

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 1/185 (0%)
 Frame = -2

Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV-RA 384
           A++++V+ K+ R+ +   Y  RE D ++      E        R E+T++   +GV+ RA
Sbjct: 15  ALQEYVDKKIARLTR---YFDREADKQIYVTMAVE----GLDHRVEMTVFV--NGVIFRA 65

Query: 383 EEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEI 204
           EE +   Y SIDL +  ++ ++ + KEK     R  +GP          P     + D +
Sbjct: 66  EEKSPDMYASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAV 115

Query: 203 EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24
             T   DDE +    VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R
Sbjct: 116 AET---DDEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRR 168

Query: 23  KEGGY 9
           + G Y
Sbjct: 169 RSGDY 173

[217][TOP]
>UniRef100_A3DJE4 Sigma 54 modulation protein / SSU ribosomal protein S30P n=3
           Tax=Clostridium thermocellum RepID=A3DJE4_CLOTH
          Length = 177

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 3/190 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A+K+    KVG+ + K+     E  + +S +              EVT+  +  G++
Sbjct: 12  VTEALKEAAVKKVGK-LDKYFRRDAEATITMSVQKNRHI--------VEVTIPFEG-GLL 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIK---EKETDHGRHMKGPNRLKFSEVILPLPSED 219
           RAEE +   Y SID V   ++R++R+ K   EK+   G        L+F  +      + 
Sbjct: 62  RAEEDSPDMYASIDKVIDSLERQIRRNKTKLEKKVHDGS-------LRFENI------KF 108

Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           ++DE+E  P+         EVVRTK F + P+TV EAI Q+ ++ H F+ F N ET E N
Sbjct: 109 DDDEVEEEPKF--------EVVRTKKFAIKPMTVEEAILQMNLLGHQFFMFSNAETNEAN 160

Query: 38  IVYKRKEGGY 9
           +VY+RK+G Y
Sbjct: 161 VVYRRKDGNY 170

[218][TOP]
>UniRef100_A8SVF0 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
           27759 RepID=A8SVF0_9FIRM
          Length = 175

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 56/187 (29%), Positives = 99/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++ ++  V+DK+ ++     Y   +   +++      F      ++ EVT+  K H ++
Sbjct: 12  VTEGLRNAVQDKLSKL---EKYFAADTGAQVT------FSVEKDRQKIEVTIPMKGH-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  Y SIDLV  +I+R++ K ++K  D     K  N    +E  +    ED ED
Sbjct: 62  RAEQVSDDMYVSIDLVVEVIERQVTKHRKKLID-----KEQNVAYLNEAFV---DEDIED 113

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           + +I            ++VRTK F + P+   +A  Q++++ H+FY FRN ET E+N+VY
Sbjct: 114 DDDI------------KIVRTKKFAVKPMYPEDACIQMDLLGHNFYVFRNAETDEVNVVY 161

Query: 29  KRKEGGY 9
           KRK   Y
Sbjct: 162 KRKGNTY 168

[219][TOP]
>UniRef100_UPI00004C2450 COG1544: Ribosome-associated protein Y (PSrp-1) n=1
           Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C2450
          Length = 182

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 59/185 (31%), Positives = 103/185 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ +VE K+ + I+K+    +E+D R++ +   E     R+ + EVT+       +
Sbjct: 13  VTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVEVTIPLDSV-TL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV   I+R++RK K K     R  K P    F+       +E E +
Sbjct: 66  RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-------TEFEAE 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E++  P+         +VVRTK   + P+ V EA  Q+E++ HDF+ + + E G  NI+Y
Sbjct: 118 EVDEIPEV--------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSENGATNILY 169

Query: 29  KRKEG 15
           +R++G
Sbjct: 170 RREDG 174

[220][TOP]
>UniRef100_B8FYZ1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
           Tax=Desulfitobacterium hafniense RepID=B8FYZ1_DESHD
          Length = 175

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 62/187 (33%), Positives = 94/187 (50%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA+K++V  +VG+ ++K+S    +V V L    G          R EVT   +   ++
Sbjct: 12  VTDALKEYVLKRVGK-LEKYSDEFMDVKVTLLVEEG--------RHRVEVTAPLQGM-IL 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R EE +   Y SIDLV   ++R++ K + +     R       LK  E+  P   ED+  
Sbjct: 62  RGEEESGDMYASIDLVVEKLERQIDKYRTRINKRMR----TKVLKDHEIEHPALYEDDS- 116

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                          EEVVR K F   P++V EAI Q+ +V H+FYAF N +T  IN+VY
Sbjct: 117 ---------------EEVVRHKKFGTKPMSVEEAIMQMNLVGHNFYAFTNMDTNVINVVY 161

Query: 29  KRKEGGY 9
           +R+ G Y
Sbjct: 162 RRRSGDY 168

[221][TOP]
>UniRef100_B2A816 Sigma 54 modulation protein, SSU ribosomal protein S30P n=1
           Tax=Natranaerobius thermophilus JW/NM-WN-LF
           RepID=B2A816_NATTJ
          Length = 178

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 56/187 (29%), Positives = 89/187 (47%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A+K+H++ +  + + KH     E  V LS                E T++     +V
Sbjct: 14  VTNALKEHIQRRFAK-LDKHFDDTVEAQVTLSVIKDNH--------NVEATMFLNGGMLV 64

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R E+     Y S+D V   ++R+++K K K     R   G            L  E  E 
Sbjct: 65  RGEQSTGDMYASVDQVIDKVERQIKKHKTKINRKLRQSGGS-----------LLKEGAES 113

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                     EE    E+V+TK F + P+T  EA+ Q+E++ HDF+ FRN ET E+N+VY
Sbjct: 114 T---------EEGKDPEIVKTKRFAIKPMTPEEAVLQMELIGHDFFVFRNAETEEVNVVY 164

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 165 RRKDGNY 171

[222][TOP]
>UniRef100_A3CPW1 30S ribosomal interface protein S30EA, putative n=1
           Tax=Streptococcus sanguinis SK36 RepID=A3CPW1_STRSV
          Length = 180

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 57/185 (30%), Positives = 104/185 (56%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++ +V  K+ + I+K+    +E+D R++ +   E     +T + EVT+       +
Sbjct: 13  VTDALRDYVVSKLEK-IEKYFQAEQELDARVNLKVYRE-----KTAKVEVTIPLGSI-TL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV+  I+R++RK K K       ++  NR K +   L   S  EE 
Sbjct: 66  RAEDISQDMYGSIDLVTDKIERQIRKNKTK-------IERKNRNKVATSQLFTDSFAEE- 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
                      EE+  +VVR+K+ D+ P+ + EAI Q++++ HDF+ + + E    N++Y
Sbjct: 118 ----------AEEVPSKVVRSKHIDLKPMDLEEAILQMDLLGHDFFIYSDAEDSSTNVIY 167

Query: 29  KRKEG 15
           +R++G
Sbjct: 168 RREDG 172

[223][TOP]
>UniRef100_C4GCR0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles
           DSM 14600 RepID=C4GCR0_9FIRM
          Length = 176

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 63/187 (33%), Positives = 93/187 (49%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L+D +K  VED     + K     RE  +   T    + G+     R E+T+  K  G+V
Sbjct: 12  LTDGLKSAVED----ALSKLDRYFREDTLAHVTMSVDKAGQ-----RVELTIPVKG-GIV 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R E+  +  Y SID  S  I+ +L K + K  D  R  KG         +L    E+  D
Sbjct: 62  RCEKTTDDMYVSIDAASEGIEDQLTKYRHKLVD--RAHKG--------AVLNAAFEEGFD 111

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E       D+EEE+  ++VRTK FD+ P+   +A  Q+E++ H F+ F N ET  +N+VY
Sbjct: 112 E-------DEEEEI--KIVRTKKFDLKPMYAEDACAQMELLGHSFFVFTNAETDAVNVVY 162

Query: 29  KRKEGGY 9
           +RK G Y
Sbjct: 163 RRKNGSY 169

[224][TOP]
>UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum
           RepID=C6VLR5_LACPJ
          Length = 188

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 4/191 (2%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVD----VRLSTRGGGEFGRGPRTRRCEVTLYTKR 402
           ++ A++ +V+ +VG++     Y    VD    V L            +T + EVT+    
Sbjct: 13  VTQAIRDYVQKRVGKL---QKYFDNNVDSIAHVNLKVHPD-------KTAKVEVTIPLP- 61

Query: 401 HGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE 222
           + V+RAEE +   Y S+DLV+  ++R++RK K K     R  KG   + F+         
Sbjct: 62  YLVLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGYKAIDFAAT------- 113

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
              DE       D +++L  +VVRTK   + P+   EAI Q++M+ HDF+ + + ET  I
Sbjct: 114 ---DETVAAADNDQDDKL--DVVRTKRVALKPMDNEEAILQMDMLGHDFFIYEDAETDAI 168

Query: 41  NIVYKRKEGGY 9
           NIVY+R +G Y
Sbjct: 169 NIVYRRNDGRY 179

[225][TOP]
>UniRef100_C2C307 Ribosome-associated inhibitor protein Y n=1 Tax=Listeria grayi DSM
           20601 RepID=C2C307_LISGR
          Length = 189

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 55/189 (29%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++ ++ +VE K+ + ++++     + +V ++ +   +     ++ + EVT+      V+
Sbjct: 13  VTEPIRDYVEKKIDK-LERYFNETPDANVHVNLKVYSD-----KSAKVEVTIPLPNL-VL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR--LKFSEVILPLPSEDE 216
           RAEE     Y S+DL++  ++R++RK K K     R  KG  +    FSE+    PSE+ 
Sbjct: 66  RAEETNGDLYASVDLIADKLERQIRKHKTKVNRKFRD-KGSEKDYFAFSEINDSTPSEET 124

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
           + + +I            E+VRTK F + P+   EA+ Q+ ++ H+F+ F + ET   NI
Sbjct: 125 DSDYDI------------EIVRTKSFSLKPMDSEEAVLQMNLLGHNFFVFNDAETNGTNI 172

Query: 35  VYKRKEGGY 9
           VYKRK+G Y
Sbjct: 173 VYKRKDGKY 181

[226][TOP]
>UniRef100_Q5HHR8 Uncharacterized protein SACOL0815 n=1 Tax=Staphylococcus aureus
           subsp. aureus COL RepID=Y815_STAAC
          Length = 190

 Score = 80.9 bits (198), Expect = 6e-14
 Identities = 52/188 (27%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ ++E+K+G++ +  + +   V  V++ T             + EVT+  K +  
Sbjct: 13  ITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-NVT 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE  +  Y  IDL+++ ++R++RK K +     R  +G   +  +E+        E 
Sbjct: 65  LRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAEL-------QEM 116

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
            E ++     D+ E+  E++R+K F + P+   EA+ Q+ ++ HDF+ F + ET   +IV
Sbjct: 117 QETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFIDRETDGTSIV 174

Query: 32  YKRKEGGY 9
           Y+RK+G Y
Sbjct: 175 YRRKDGKY 182

[227][TOP]
>UniRef100_UPI000196CE6C hypothetical protein CATMIT_02221 n=1 Tax=Catenibacterium mitsuokai
           DSM 15897 RepID=UPI000196CE6C
          Length = 193

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 53/187 (28%), Positives = 104/187 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA++  +  K+  ++ K+  + ++V+ ++  R        P  ++ EVT+ T+ + ++
Sbjct: 27  ITDAIEDKITKKLA-LLDKYFIMGQDVEAKVLIR------TYPFGQKIEVTIPTE-YVLL 78

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE ++  Y +IDLV   ++R++RK K K +   ++    N+L F+   L    E EE+
Sbjct: 79  RAEETSDDLYEAIDLVIDKLERQIRKYKTKLSRKSKN----NKLAFNINTLEALEEPEEE 134

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           ++               VV+TK  +  P+ + EAI Q+E++ H F+ +++ ET    +VY
Sbjct: 135 DV---------------VVKTKTINPKPMDMEEAIMQMELIGHSFFVYKDIETNTACVVY 179

Query: 29  KRKEGGY 9
           KR++GGY
Sbjct: 180 KRRDGGY 186

[228][TOP]
>UniRef100_C8WT44 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446 RepID=C8WT44_ALIAC
          Length = 180

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 1/185 (0%)
 Frame = -2

Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV-RA 384
           A++ +V+ K+ R+ +   Y  RE D ++      E        R E+T++   +GV+ RA
Sbjct: 15  ALQDYVDKKIARLTR---YFDREADKQIYVTMAVE----GLDHRVEMTVFV--NGVIFRA 65

Query: 383 EEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEI 204
           EE +   Y SIDL +  ++ ++ + KEK     R  +GP          P     + D +
Sbjct: 66  EEKSPDMYASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAV 115

Query: 203 EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24
             T   DDE +    VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R
Sbjct: 116 AET---DDEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRR 168

Query: 23  KEGGY 9
           + G Y
Sbjct: 169 RSGDY 173

[229][TOP]
>UniRef100_C8P6S3 Ribosomal subunit interface protein n=1 Tax=Lactobacillus antri DSM
           16041 RepID=C8P6S3_9LACO
          Length = 179

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 50/144 (34%), Positives = 81/144 (56%)
 Frame = -2

Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261
           RT + EVT+    +  +RAEE +   YGS+DLV+  ++R++RK K K     R  KG   
Sbjct: 50  RTYKVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGLKN 107

Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81
           L+F      +PS+D+    E+            ++VRTK   + P+   EA+ Q++M+ H
Sbjct: 108 LEF------VPSDDDAASDEL------------KIVRTKQVSLKPMDPEEAVLQMDMLGH 149

Query: 80  DFYAFRNEETGEINIVYKRKEGGY 9
           DF+ F++ ET   +IVY+R++G Y
Sbjct: 150 DFFVFQDAETNGTSIVYRRRDGRY 173

[230][TOP]
>UniRef100_C6PFL3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Thermoanaerobacter italicus Ab9 RepID=C6PFL3_9THEO
          Length = 181

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 5/189 (2%)
 Frame = -2

Query: 560 AVKQHVEDKVGRVIQKHS-YLVREVDVR--LSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           AV   + D V + + K S Y   + +VR  LS +              E+T+  K  G++
Sbjct: 12  AVTDGLRDAVVKKVSKLSKYFTEDTEVRTVLSVQKNHHIA--------EITIPFK--GII 61

Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI-LPLPSEDE 216
            RAEE ++  YGSID V   I+R++ K K K           NR   +E I   +PS  +
Sbjct: 62  FRAEEVSDDMYGSIDRVVDKIERQILKHKTKLK---------NRFGANESIRFEIPSVYQ 112

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
           E        K++EEE   E+V+TK F + P++  EAI Q+ ++ H+F+ F N +T  IN+
Sbjct: 113 E-------AKEEEEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINV 165

Query: 35  VYKRKEGGY 9
           VYKRK+G Y
Sbjct: 166 VYKRKDGKY 174

[231][TOP]
>UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella
           formatexigens DSM 14469 RepID=C6LIX7_9FIRM
          Length = 176

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 58/188 (30%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++ ++  V DK+G+ ++++     E+ V +S             ++ EVT+  K + ++
Sbjct: 12  ITEGLRTTVMDKLGK-LERYFTPDTEIIVTMSVE--------KERQKIEVTIPVKGN-II 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFSEVILPLPSEDEE 213
           R+E+ +   Y SIDLV  +I+R+LRK K K     +H +G N R +F E         +E
Sbjct: 62  RSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSNFRREFIE---------KE 110

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
           + +E        EE+   ++RTK+F + P+   +A  Q+E++ H+F+ F N ET E+N+V
Sbjct: 111 ETVE-------PEEV--NIIRTKHFGIKPMYPEDACIQMELLGHNFFVFCNAETEEVNVV 161

Query: 32  YKRKEGGY 9
           YKRK   Y
Sbjct: 162 YKRKGNTY 169

[232][TOP]
>UniRef100_B2TK14 Ribosome-associated protein Y n=3 Tax=Clostridium botulinum
           RepID=B2TK14_CLOBB
          Length = 177

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 56/187 (29%), Positives = 100/187 (53%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           L++A+++ VE K+ + + K+     E    LS +         R R+    +      V+
Sbjct: 12  LTNALREMVEKKISK-LGKYFNSDIEAKATLSVQ---------RNRQIVEVMIPFNGVVL 61

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R EE  E  Y +IDLV+  ++R++RK K K +      K    LKF E++          
Sbjct: 62  RGEEANEDMYRAIDLVAEKLERQIRKQKTKLS-----RKKSGSLKFGEIV---------- 106

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
             +++P   DEEE   ++V+ K F + P+ + EAI Q+E+V H+F+ +++ ++ +IN++Y
Sbjct: 107 --DLSPVAVDEEEA--KLVKRKRFGVKPMDIDEAILQMELVGHNFFVYQDVDSNKINVIY 162

Query: 29  KRKEGGY 9
           KRK+G Y
Sbjct: 163 KRKDGDY 169

[233][TOP]
>UniRef100_Q5XAQ7 Ribosome-associated factor Y n=10 Tax=Streptococcus pyogenes
           RepID=RAFY_STRP6
          Length = 182

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 59/185 (31%), Positives = 103/185 (55%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ +VE K+ + I+K+    +E+D R++ +   E     R+ + EVT+       +
Sbjct: 13  VTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVEVTIPLDSV-TL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAE+ ++  YGSIDLV   I+R++RK K K     R  K P    F+       +E E +
Sbjct: 66  RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-------TEFEAE 117

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E++  P+         +VVRTK   + P+ V EA  Q+E++ HDF+ + + E G  NI+Y
Sbjct: 118 EVDEIPEV--------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGATNILY 169

Query: 29  KRKEG 15
           +R++G
Sbjct: 170 RREDG 174

[234][TOP]
>UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius
           UCC118 RepID=Q1WSW6_LACS1
          Length = 184

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 51/144 (35%), Positives = 81/144 (56%)
 Frame = -2

Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261
           +T + EVT+    + V+RAEE +   Y SIDLV+  ++R++RK K K     R  KG   
Sbjct: 50  KTAKVEVTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKN 107

Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81
            +F+      P  DE++E+E         +   E+VRTK   + P+   EA+ Q++M+ H
Sbjct: 108 FEFA------PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGH 152

Query: 80  DFYAFRNEETGEINIVYKRKEGGY 9
           DF+ + + E G I IVY+R++G Y
Sbjct: 153 DFFIYEDAENGGIYIVYRRRDGRY 176

[235][TOP]
>UniRef100_B8CYM6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Halothermothrix orenii H 168 RepID=B8CYM6_HALOH
          Length = 184

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 53/187 (28%), Positives = 93/187 (49%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A+K++  +KV ++ +      +E  + +    G            EVT Y     ++
Sbjct: 12  VTPALKEYAIEKVSKLGKYFDGEPQEAHISMEVEKGRHI--------VEVTAYLNGL-IL 62

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           R EE ++  Y SID V   ++R++ K K K     R  K   + ++ E        +  +
Sbjct: 63  RGEEESQDMYASIDGVLEKLERQVHKYKTKINRKIRERKQEFKKEYKE--------ERRE 114

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           EI       +E+E    +VRTK F + P++V EA  Q++++ HDF+ F N  T ++N+VY
Sbjct: 115 EI----LNSEEDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTNANTEQVNVVY 170

Query: 29  KRKEGGY 9
           KRK+G Y
Sbjct: 171 KRKDGNY 177

[236][TOP]
>UniRef100_C5VNV1 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum D
           str. 1873 RepID=C5VNV1_CLOBO
          Length = 178

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
 Frame = -2

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222
           ++RAEE     Y +IDLV   ++R++RK K K  +  HG      + LKF  +   +P  
Sbjct: 60  ILRAEEANNDMYAAIDLVLEKLERQIRKQKTKLEKRKHG------DALKFQFIPEYIP-- 111

Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
                      KD E+ +  ++V+TK F + P++  EA+ Q+E++ H+F+ FRN +T E+
Sbjct: 112 -----------KDAEDNVESKIVKTKKFAVKPMSNEEAVLQMELLGHNFFVFRNSDTDEV 160

Query: 41  NIVYKRKEGGY 9
           N++YKRK+G Y
Sbjct: 161 NVLYKRKDGQY 171

[237][TOP]
>UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379
           RepID=C5NVZ2_9BACL
          Length = 181

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 57/187 (30%), Positives = 102/187 (54%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++ A++++VE+KV + ++K+     E +V  + +           ++ E+T+   R   +
Sbjct: 13  ITQAIREYVENKVSK-LEKYFADSLEANVYANAKVYKN-----NKKKIEITV-PLRGVTL 65

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE  E  Y ++DLV   ++R++RK K K    GR  KG     F+E            
Sbjct: 66  RAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KG-----FAE------------ 107

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           EI +T + ++ EE   ++ + K   + P+T  EA+ Q+E++ HDF+AF +  T EI++VY
Sbjct: 108 EIILTSELEEAEETTLDLGKVKQLKVEPMTREEAVFQMELLGHDFFAFLDNTTNEISVVY 167

Query: 29  KRKEGGY 9
           KR++ GY
Sbjct: 168 KRRDTGY 174

[238][TOP]
>UniRef100_C3GRH2 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1 RepID=C3GRH2_BACTU
          Length = 180

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
           ++ A+K++V  K+ + ++++     E+ V L      +        R EVT+ +T    +
Sbjct: 12  VTPALKEYVGKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE     Y +IDLV   ++R++RK K K     R  KG  +  F   ILP       
Sbjct: 61  LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
              E     D  EE   E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 167 YGRKDGKY 174

[239][TOP]
>UniRef100_C1P990 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Bacillus coagulans 36D1 RepID=C1P990_BACCO
          Length = 187

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 56/188 (29%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGP-RTRRCEVTLYTKRHGV 393
           ++ A++ ++E KV ++ +   Y V   D  ++ +        P +T + E+T+   +  V
Sbjct: 13  VTPAIRDYIEKKVNKLDR---YFVETPDTSVNVK----LKVNPDKTSKVEITIPMPQV-V 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE  E  Y +IDL++  ++R++RK K K     R  KG  R  F+     L  +   
Sbjct: 65  LRAEETNEDMYAAIDLIADKLERQIRKHKTKVNRKLRE-KGSTRELFTTPDTGLKEKQA- 122

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
                  +K+++ EL  ++VRTK+F++ P+   EA+ Q+ ++ H+F+ + + ET   NIV
Sbjct: 123 -------RKEEDSEL--QIVRTKHFNLKPMDSEEAVLQMNLLGHNFFIYTDAETNHTNIV 173

Query: 32  YKRKEGGY 9
           Y+RK+G Y
Sbjct: 174 YRRKDGKY 181

[240][TOP]
>UniRef100_C0VBX3 SSU ribosomal protein S30P n=1 Tax=Xylanimonas cellulosilytica DSM
           15894 RepID=C0VBX3_9MICO
          Length = 216

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 4/186 (2%)
 Frame = -2

Query: 554 KQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEH 375
           ++HVEDK+ +V Q  S LV+ VDV ++     +        R E+T+  K   V+RAE  
Sbjct: 17  RRHVEDKLTKVTQL-SPLVQRVDVEVTHENNPKLS--DVRERVELTVRAKGP-VIRAEAA 72

Query: 374 AETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLK-FSEVILPLPSEDEEDEIE 201
           A+  YG++DL    +  +LR+ +++  DH R ++  P  ++ + EV  P P E EE    
Sbjct: 73  ADDRYGALDLAIDKLIERLRRSRDRRKDHRRTYVTAPVDVRPYDEVRSPEP-EPEESVPL 131

Query: 200 ITPQKDDEEELIEE--VVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYK 27
           +   +  E +L +   V+R K      +TV +A+ ++E+V HDF+ F ++ET   + VYK
Sbjct: 132 VVDGEAVEHQLGDSPVVIRQKLHSADAMTVDDAVYEMELVGHDFFLFIDKETARPSAVYK 191

Query: 26  RKEGGY 9
           RK   Y
Sbjct: 192 RKGWTY 197

[241][TOP]
>UniRef100_B9ND14 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ND14_POPTR
          Length = 102

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 14/101 (13%)
 Frame = -2

Query: 314 KIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI-------- 165
           KIK+KE+DHGRHMKG N+ K  E   P+    E D   ++ +KDD+  +EL         
Sbjct: 2   KIKDKESDHGRHMKGFNKFKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHLVTIH 58

Query: 164 ----EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54
                  V TKYFDMPP+TV EAI +L  VDH FY FR+ E
Sbjct: 59  SIISSNAVHTKYFDMPPVTVDEAIVRLGNVDHAFYGFRHAE 99

[242][TOP]
>UniRef100_A0Q2Y0 Ribosomal subunit interface protein n=1 Tax=Clostridium novyi NT
           RepID=A0Q2Y0_CLONN
          Length = 178

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 44/129 (34%), Positives = 75/129 (58%)
 Frame = -2

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           ++RAE+     Y +ID+V   ++R++RK K K     +  K  + LKF  +   +P    
Sbjct: 60  ILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKL----QRRKHGDALKFQFIPEYVP---- 111

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
                    KDDE+ +  ++V+TK F + P++  EA+ Q+E++ H+F+ F N ET E+N+
Sbjct: 112 ---------KDDEDNIESKIVKTKRFAIKPMSREEAVLQMELLGHNFFVFTNAETEEVNV 162

Query: 35  VYKRKEGGY 9
           +YKRK+G Y
Sbjct: 163 LYKRKDGQY 171

[243][TOP]
>UniRef100_C6J2M0 Ribosomal subunit interface protein n=1 Tax=Paenibacillus sp. oral
           taxon 786 str. D14 RepID=C6J2M0_9BACL
          Length = 183

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 51/129 (39%), Positives = 70/129 (54%)
 Frame = -2

Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
           V+RAE+ ++  Y SID V   ++R++RK K K     R     N L   +      + DE
Sbjct: 62  VLRAEDRSDDMYASIDAVVDKLERQIRKHKTKINRKLRQKGVKNSLFVEDATTGSVALDE 121

Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
                       EEEL  EVVRTK F + P+ V EAI Q+ MV H+F+ F N +T E+N+
Sbjct: 122 -----------GEEEL--EVVRTKRFTLKPMDVEEAILQMNMVGHNFFVFSNIDTKEVNV 168

Query: 35  VYKRKEGGY 9
           VYKR +G Y
Sbjct: 169 VYKRNDGKY 177

[244][TOP]
>UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
           vaginalis ATCC 49540 RepID=C2ETD9_9LACO
          Length = 189

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 50/144 (34%), Positives = 84/144 (58%)
 Frame = -2

Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261
           RT + EVT+    +  +RAEE +   YGS+DLV+  ++R++RK K K     R  KG   
Sbjct: 59  RTYKVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGFKS 116

Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81
           L+F      +P++D+ +          +++L  ++VRTK   + P+   EA+ Q++M+ H
Sbjct: 117 LEF------VPTDDDAES---------QDDL--KIVRTKQISLKPMDPEEAVLQMDMLGH 159

Query: 80  DFYAFRNEETGEINIVYKRKEGGY 9
           DF+ F++ ET   +IVY+RK+G Y
Sbjct: 160 DFFVFQDAETDGTSIVYRRKDGRY 183

[245][TOP]
>UniRef100_C2AF84 SSU ribosomal protein S30P; sigma 54 modulation protein n=1
           Tax=Thermomonospora curvata DSM 43183 RepID=C2AF84_THECU
          Length = 221

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 19/206 (9%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++D  ++HV++K+ + I++ +  +  VDV +S           R  R E+T+ + R  V+
Sbjct: 12  VNDRFREHVDNKLAK-IERFARKIIRVDVEVSEEHNPRLA--DRRERVELTIRS-RGPVI 67

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH-GRHMKGPNRLKFSEVILPLPSE-DE 216
           RAE  AE  YG++DL    ++ +LR+  ++   H     + P +L   E +   P+    
Sbjct: 68  RAEAAAEDRYGALDLALDKLEARLRRSADRRKIHYNSGTRAPAKLAHLEPLTEPPAAAPP 127

Query: 215 EDEIEITPQKDDEE--ELIEE---------------VVRTKYFDMPPLTVFEAIDQLEMV 87
           ED  E  P  +     E  EE               VVR K+    P+T+ +A+ ++E+V
Sbjct: 128 EDSAEGAPAAEPAAATEPAEEGGNVVPIAMDGDGPLVVREKFHRSAPMTIDQALYEMELV 187

Query: 86  DHDFYAFRNEETGEINIVYKRKEGGY 9
            HDF+ FR++E G  ++VY+RK   Y
Sbjct: 188 GHDFFLFRDKENGHPSVVYRRKGWNY 213

[246][TOP]
>UniRef100_C1V2G6 SSU ribosomal protein S30P n=1 Tax=Haliangium ochraceum DSM 14365
           RepID=C1V2G6_9DELT
          Length = 207

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
 Frame = -2

Query: 566 SDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVR 387
           ++A+K++  D++ R I+K+      V V +ST  G +        R +VT+       V 
Sbjct: 13  TEALKEYARDRMER-IKKYFPDPISVHVVMSTERGYK-------HRVDVTMQLHNGLTVA 64

Query: 386 AEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDE 207
             E +E+ + SIDLV++ I+R++R+ K+K   H      P+ + +S  +L     + E +
Sbjct: 65  GRETSESMHSSIDLVTAKIERQVRRYKDKLRTHKVKNHIPS-VPWSHTVLSDSESENESQ 123

Query: 206 IEITPQKDDEEELIEE----VVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
           +    + D   E +      VVRT+ F   P++V EAI QL +    F  FR++E+G +N
Sbjct: 124 VAEGAELDVAAEAVAGAEHIVVRTEKFHADPMSVSEAIMQLNLGGQQFLVFRHDESGRVN 183

Query: 38  IVYKRKEGGY 9
           +VY R +G Y
Sbjct: 184 VVYHRGDGSY 193

[247][TOP]
>UniRef100_B9CQX8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus capitis
           SK14 RepID=B9CQX8_STACP
          Length = 191

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 53/188 (28%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
           ++DA++ ++EDK+G++ +  + +   V  V++ T             + EVT+  K    
Sbjct: 13  ITDAIRNYIEDKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-DVT 64

Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
           +RAEE  +  Y  IDL++  ++R++RK K +     R  +G   +  +EV      E   
Sbjct: 65  LRAEERHDDLYAGIDLITGKLERQVRKYKTRVNRKHRD-RGDQEVFVAEV-----QEASP 118

Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
            E+    +   + E+  E++R+K F + P+   EA+ Q+ ++ HDF+ F + ET   +IV
Sbjct: 119 GEVSGAEESVSDSEI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 176

Query: 32  YKRKEGGY 9
           Y RK+G Y
Sbjct: 177 YTRKDGKY 184

[248][TOP]
>UniRef100_B9NGT0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NGT0_POPTR
          Length = 71

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = -2

Query: 134 MPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGY 9
           MPPLTV EAI+QLE VDHDFY FRNEETGEINIVYKRK GGY
Sbjct: 1   MPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGY 42

[249][TOP]
>UniRef100_A4XJ41 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Caldicellulosiruptor saccharolyticus DSM 8903
           RepID=A4XJ41_CALS8
          Length = 182

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 50/187 (26%), Positives = 92/187 (49%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           ++DA+K  +E K+ + ++++  +  +V V LS           + R            ++
Sbjct: 13  VTDALKDRIEKKLSK-LERYVKMNCDVHVTLSVE---------KIRHIVEVTIPFYGMIL 62

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE +   Y +IDLV   ++R++RK K K     +  +    + F E      +++E  
Sbjct: 63  RAEEASNDMYSAIDLVVDSLERQIRKFKTKIAKRAKDAESLRYMTFEEEAQQETNQEENG 122

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E +I               +TK F + P++V EAI Q+ ++ H F+ F N++T ++N+VY
Sbjct: 123 EFKIA--------------KTKRFPIKPMSVDEAILQMNLLGHSFFVFLNQDTDKVNVVY 168

Query: 29  KRKEGGY 9
           KR +G Y
Sbjct: 169 KRNDGAY 175

[250][TOP]
>UniRef100_C0X601 Ribosome-associated inhibitor protein Y n=22 Tax=Enterococcus
           faecalis RepID=C0X601_ENTFA
          Length = 189

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 57/187 (30%), Positives = 99/187 (52%)
 Frame = -2

Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
           +++A++ +VE KVG+ ++++     E  V ++ +   E     +T + EVT+    + V+
Sbjct: 19  VTEAIRDYVEKKVGK-LERYFSDSPEATVHVNLKVYTE-----KTAKVEVTIPLP-YLVL 71

Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
           RAEE +   Y SIDLV   ++R++RK K K     R   G N  K +  ++   +E+   
Sbjct: 72  RAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRET-GRNNTKAAVFLVGEETEETPS 130

Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
           E++I              VRTK   + P+   EA+ Q+ M+ H+F+ F + ET   +IVY
Sbjct: 131 ELDI--------------VRTKRLSLKPMDSEEAVLQMNMLGHNFFIFEDAETNGTSIVY 176

Query: 29  KRKEGGY 9
           +RK+G Y
Sbjct: 177 RRKDGKY 183