[UP]
[1][TOP] >UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T7E3_SOYBN Length = 291 Score = 297 bits (761), Expect = 3e-79 Identities = 154/187 (82%), Positives = 167/187 (89%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+DAVKQHVEDKVG+ +QKHS+LVREVDVRLS RGGGEFGRGPRTRRCEVTL+TKRHGVV Sbjct: 81 LTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVV 140 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK E + LP EED Sbjct: 141 RAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVEQLPV--EED 198 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 EI ++PQ +EEE I+EVVRTKYFDMPPLTV EAI+QLE VDHDFY FRNEETGEINIVY Sbjct: 199 EI-LSPQ--EEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVY 255 Query: 29 KRKEGGY 9 KRKEGGY Sbjct: 256 KRKEGGY 262 [2][TOP] >UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001984F94 Length = 298 Score = 270 bits (691), Expect = 4e-71 Identities = 135/187 (72%), Positives = 159/187 (85%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVV Sbjct: 89 LTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELGKGPKIRRCEVTLFTKKHGVV 147 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK + PL E+ Sbjct: 148 RAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPL----VEE 203 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E ++ PQK+D +LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI+Y Sbjct: 204 EADVVPQKED-GDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILY 262 Query: 29 KRKEGGY 9 KRK GGY Sbjct: 263 KRKAGGY 269 [3][TOP] >UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR Length = 306 Score = 270 bits (691), Expect = 4e-71 Identities = 141/187 (75%), Positives = 156/187 (83%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D VK+HVEDKVG+ +QKHS+LVREVDVRLS RGG E G+GPR RRCEVTL+T RHGVV Sbjct: 97 LTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGG-ELGKGPRIRRCEVTLFTNRHGVV 155 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AET Y SIDLVSSIIQRKLRKIKEKE+DHGRHMKG NRLK E P+P E D Sbjct: 156 RAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVRE---PVPQVVEGD 212 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E++ Q + E+ IEEVVRTK+FDMPPLTV EAI+QLE VDHDFY FRNEETGEINIVY Sbjct: 213 ADEVSQQ--EVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVY 270 Query: 29 KRKEGGY 9 KRK GGY Sbjct: 271 KRKAGGY 277 [4][TOP] >UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QEV5_VITVI Length = 230 Score = 270 bits (691), Expect = 4e-71 Identities = 135/187 (72%), Positives = 159/187 (85%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVV Sbjct: 21 LTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELGKGPKIRRCEVTLFTKKHGVV 79 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK + PL E+ Sbjct: 80 RAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPL----VEE 135 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E ++ PQK+D +LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI+Y Sbjct: 136 EADVVPQKED-GDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILY 194 Query: 29 KRKEGGY 9 KRK GGY Sbjct: 195 KRKAGGY 201 [5][TOP] >UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SEK8_RICCO Length = 311 Score = 270 bits (690), Expect = 6e-71 Identities = 136/187 (72%), Positives = 159/187 (85%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D VK+HVEDKVG+ +QKHS+LVREVDVRLS RGG EFG+GP+ RRCEVTL+TK+HGV+ Sbjct: 99 LTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGG-EFGKGPKIRRCEVTLFTKKHGVI 157 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AET Y SIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK E + P +D+ D Sbjct: 158 RAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVAE-PVKDDTD 216 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E++ D++E+ I+EVVRTKYFDMPPLTV EAI+QL+ VDHDFY FRNEETGEINI+Y Sbjct: 217 EVD-GVLGDEDEDYIDEVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRNEETGEINIIY 275 Query: 29 KRKEGGY 9 KRK GGY Sbjct: 276 KRKAGGY 282 [6][TOP] >UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis thaliana RepID=Q9FLV3_ARATH Length = 365 Score = 268 bits (684), Expect = 3e-70 Identities = 132/188 (70%), Positives = 161/188 (85%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 LS+ +KQHVE+KVG+ +QKHS+LVREVDVRLS RGG EFG+GPR RRCEVTL+TK+HGVV Sbjct: 150 LSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGG-EFGKGPRIRRCEVTLFTKKHGVV 208 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AET Y IDLVS+IIQRKLRKIKEK++DHGRHMKG NRLK E ++ ED ED Sbjct: 209 RAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVED 268 Query: 209 EIEIT-PQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 + + ++++E++LI+E+VRTK F+MPPLTV EA++QLE+V HDFY F+NEETGEINIV Sbjct: 269 STDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINIV 328 Query: 32 YKRKEGGY 9 YKRKEGGY Sbjct: 329 YKRKEGGY 336 [7][TOP] >UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR Length = 231 Score = 264 bits (674), Expect = 4e-69 Identities = 135/187 (72%), Positives = 155/187 (82%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 LSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G+GPR RRCEVTL+TKRHGVV Sbjct: 21 LSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELGKGPRIRRCEVTLFTKRHGVV 79 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK E + + ED+ D Sbjct: 80 RAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDDAD 139 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E+ + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI+Y Sbjct: 140 EV----SQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINIIY 195 Query: 29 KRKEGGY 9 KRK GGY Sbjct: 196 KRKAGGY 202 [8][TOP] >UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa RepID=A9PHY3_POPTR Length = 306 Score = 264 bits (674), Expect = 4e-69 Identities = 135/187 (72%), Positives = 155/187 (82%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 LSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G+GPR RRCEVTL+TKRHGVV Sbjct: 96 LSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELGKGPRIRRCEVTLFTKRHGVV 154 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK E + + ED+ D Sbjct: 155 RAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDDAD 214 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E+ + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI+Y Sbjct: 215 EV----SQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINIIY 270 Query: 29 KRKEGGY 9 KRK GGY Sbjct: 271 KRKAGGY 277 [9][TOP] >UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea RepID=RR30_SPIOL Length = 302 Score = 251 bits (641), Expect = 3e-65 Identities = 128/190 (67%), Positives = 152/190 (80%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +SD V+ HVEDKVG+ + KHS+LVREVDVRLS RGG + +GP+ RRCEVTL+TKRHGV+ Sbjct: 86 VSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGG-DLSKGPKLRRCEVTLFTKRHGVI 144 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE---VILPLPSED 219 RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHMKG NR K + V + Sbjct: 145 RAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDPEPVRITREEVL 204 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 EE E P ++++ IEEVVRTKYFDMPPLT+ EA++QLE VDHDFYAFRNEETG+IN Sbjct: 205 EEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDIN 264 Query: 38 IVYKRKEGGY 9 I+YKRKEGGY Sbjct: 265 ILYKRKEGGY 274 [10][TOP] >UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum RepID=C9EFD1_SOLTU Length = 280 Score = 248 bits (633), Expect = 2e-64 Identities = 127/192 (66%), Positives = 154/192 (80%), Gaps = 5/192 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E G+GP+ RRCEVTL+TK+HGV+ Sbjct: 68 LTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPKIRRCEVTLFTKKHGVI 126 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED--- 219 RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHMKG +RLK + + L ED Sbjct: 127 RAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVLLVQEDLET 186 Query: 218 --EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 45 +E+E+E D + + EVVR K FDMPPL+V EAI+QLE VDHDFY FRNEETGE Sbjct: 187 LPQEEEVE---DDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGE 243 Query: 44 INIVYKRKEGGY 9 INIVY+RKEGGY Sbjct: 244 INIVYRRKEGGY 255 [11][TOP] >UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum RepID=Q672Q2_SOLLC Length = 311 Score = 242 bits (618), Expect = 1e-62 Identities = 125/192 (65%), Positives = 151/192 (78%), Gaps = 5/192 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E G+GP+ RRCEVTL+TK+HGV+ Sbjct: 96 LTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPKIRRCEVTLFTKKHGVI 154 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED--- 219 RAEE E+ YGSID+VSSIIQRKLRKIKEK++D GRHMKG +RLK + L ED Sbjct: 155 RAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPEALLVQEDLET 214 Query: 218 --EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 45 +E+E+E D + + EVVR K FDMPPL+V EAI+QLE VDHDFY FRNEETGE Sbjct: 215 LSQEEEVE----DDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGE 270 Query: 44 INIVYKRKEGGY 9 INIVY+RKEGGY Sbjct: 271 INIVYRRKEGGY 282 [12][TOP] >UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays RepID=B6TYP8_MAIZE Length = 309 Score = 221 bits (564), Expect = 2e-56 Identities = 114/189 (60%), Positives = 146/189 (77%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 LS+ +K+H+EDKVGR + KH +LVREVDVRLS RGG E GRGP+T RCE+TL+TKRHGV+ Sbjct: 83 LSEKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGG-ELGRGPKTSRCEITLFTKRHGVL 141 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP--LPSEDE 216 RAEE AE+TY SIDL ++I++RKLRKIKEKET+ R G + + I P L E Sbjct: 142 RAEEDAESTYASIDLAAAIVKRKLRKIKEKETEVRR---GGDADGVWDEIPPADLLPPAE 198 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 D++E +DEE ++ +VVRTK F+MPPLTV EA++QLE VDHDFY FR+E TG++NI Sbjct: 199 ADDLEAAVGAEDEETVLAKVVRTKVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQVNI 258 Query: 35 VYKRKEGGY 9 +Y+RKEGGY Sbjct: 259 LYRRKEGGY 267 [13][TOP] >UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum bicolor RepID=C5WRX8_SORBI Length = 310 Score = 221 bits (562), Expect = 4e-56 Identities = 113/189 (59%), Positives = 146/189 (77%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 LSD +K+H+EDKVGR + KH +LVREVDVRLS RGG E GRGP+T RCE+TL++KRHGV+ Sbjct: 83 LSDKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGG-ELGRGPKTSRCEITLFSKRHGVL 141 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED--E 216 RAEE AE+TY SIDL ++II+RKLRKIKEKET+ R G + E LPL +D E Sbjct: 142 RAEEDAESTYASIDLAAAIIKRKLRKIKEKETEVRRDGDGGAGGAWEEE-LPLLDDDLVE 200 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 DE+ +DE+ ++ +VVRTK F+MPPLTV EA++QL+ V H+FY FR+E TG++NI Sbjct: 201 ADELAAAVGAEDEQTVVAKVVRTKVFEMPPLTVEEALEQLDNVGHNFYCFRDEATGQVNI 260 Query: 35 VYKRKEGGY 9 +Y+RKEGGY Sbjct: 261 LYRRKEGGY 269 [14][TOP] >UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LMC5_PICSI Length = 321 Score = 216 bits (551), Expect = 7e-55 Identities = 114/195 (58%), Positives = 146/195 (74%), Gaps = 8/195 (4%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+DAVK ++E+KVG +QKH+ LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVV Sbjct: 99 LTDAVKAYIEEKVGIAVQKHANLVREVDVRLSIRGG-EVGKGPKIRRCEVTLFTKKHGVV 157 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AET Y SID+VS II+RKLRKIKEK+ HGR K + K E++ + + +E Sbjct: 158 RAEEEAETIYASIDIVSDIIRRKLRKIKEKDGGHGRPSKMRKQPKLGELLSTVVMDVKET 217 Query: 209 -EIEITPQKDDEE-------ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54 + E+ D EE +L +EVVRTKYF+MPP++ EA++QL VDHDFYAFRN E Sbjct: 218 RDKELDDLADVEEMRYEKIDDLSDEVVRTKYFEMPPMSPEEALEQLMNVDHDFYAFRNME 277 Query: 53 TGEINIVYKRKEGGY 9 +GE+N++YKRK GGY Sbjct: 278 SGEVNVLYKRKHGGY 292 [15][TOP] >UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ Length = 309 Score = 213 bits (542), Expect = 8e-54 Identities = 111/192 (57%), Positives = 147/192 (76%), Gaps = 5/192 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L++ VK+H+E+K GR + KHS LV+EVDVRLS RGG E RGP+ RCE+TL+TKRHGV+ Sbjct: 92 LNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELSRGPKICRCEITLFTKRHGVI 150 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSEDE 216 RAEE AE+TY SIDL SSII+RKLRKIKEKETD RH+KG P + +L +D Sbjct: 151 RAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKGTKPPVSDWPPSLLDNNDDDA 209 Query: 215 E---DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 45 + ++E +DE+ ++ +VVRTK F+MPPL+V EA++QL VDH+FYAFR+E+TGE Sbjct: 210 QAQLKDLEEAVGAEDEDTVLTKVVRTKVFEMPPLSVEEAMEQLVNVDHNFYAFRDEKTGE 269 Query: 44 INIVYKRKEGGY 9 +N++YKRKEGG+ Sbjct: 270 MNVLYKRKEGGF 281 [16][TOP] >UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RWK9_PHYPA Length = 221 Score = 199 bits (505), Expect = 2e-49 Identities = 106/187 (56%), Positives = 135/187 (72%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+DA+KQ+VE+KVG + S LV+EVDVR+S RGG E GRG + +RCEVTL+TK+HGVV Sbjct: 21 LTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETGRGGKLQRCEVTLFTKKHGVV 79 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K + + EV+ S++ D Sbjct: 80 RAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKSRHSPRIGEVL----SDEVVD 135 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 I +K D +L +E+VRTKYF+M P+ EA++QL V HDFYAFRN E+GEINI+Y Sbjct: 136 LDPILGRKPD--DLPDEIVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILY 193 Query: 29 KRKEGGY 9 KR GGY Sbjct: 194 KRTHGGY 200 [17][TOP] >UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TA00_PHYPA Length = 297 Score = 197 bits (500), Expect = 6e-49 Identities = 109/187 (58%), Positives = 134/187 (71%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+DA+KQ+VE+KVG + S LV+EVDVR+S RGG E GRG R +RCEVTL+TK+HGVV Sbjct: 99 LTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETGRGERLQRCEVTLFTKKHGVV 157 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K R+ EV+ S + D Sbjct: 158 RAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPAKYSPRI--GEVL----SNEVVD 211 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 I +K D +L +EVVRTKYF+M P+ EA++QL V HDFYAFRN E+GEINI+Y Sbjct: 212 LDPILERKPD--DLPDEVVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILY 269 Query: 29 KRKEGGY 9 KR GGY Sbjct: 270 KRTHGGY 276 [18][TOP] >UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TFU4_SOYBN Length = 208 Score = 188 bits (478), Expect = 2e-46 Identities = 97/130 (74%), Positives = 111/130 (85%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+DAVK+HVEDKVG+ +QKHS+LVREVDVRLS RGGGEFGRGPRTRRCEVTL+TKRHGVV Sbjct: 81 LTDAVKRHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVV 140 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK P D Sbjct: 141 RAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKLGS---PWSITYGRD 197 Query: 209 EIEITPQKDD 180 EI ++P++++ Sbjct: 198 EI-LSPREEE 206 [19][TOP] >UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJW3_9ROSI Length = 268 Score = 178 bits (451), Expect = 3e-43 Identities = 96/138 (69%), Positives = 110/138 (79%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 LSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G+GPR RRCEVTL+TKRHGVV Sbjct: 96 LSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELGKGPRIRRCEVTLFTKRHGVV 154 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE AET Y SIDL SSIIQRKLRKIK+KE+DHGRHMKG NRLK E P+ E+D Sbjct: 155 RAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMKGFNRLKVRE---PMHQVVEDD 211 Query: 209 EIEITPQKDDEEELIEEV 156 E++ Q+D E+ IEEV Sbjct: 212 ADEVSQQED--EDYIEEV 227 [20][TOP] >UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=C6YXL0_ORYSJ Length = 321 Score = 173 bits (439), Expect = 7e-42 Identities = 101/192 (52%), Positives = 133/192 (69%), Gaps = 6/192 (3%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L++ VK+H+E+K GR + KHS LV+EVDVRLS RGG E RGP+ RCE+TL+TKRHGV+ Sbjct: 92 LNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELSRGPKICRCEITLFTKRHGVI 150 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSEDE 216 RAEE AE+TY SIDL SSII+RKLRKIKEKETD RH+KG P + +L +D Sbjct: 151 RAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKGTKPPVSDWPPSLLDNNDDDA 209 Query: 215 E---DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF-RNEETG 48 + ++E +DE+ ++ VVRTK F+MPPL+ EA++QL DH F+A R + G Sbjct: 210 QAQLKDLEEAVGAEDEDTVLTRVVRTKVFEMPPLSGEEAMEQLGNGDHTFHALPRRKNGG 269 Query: 47 EINIVYKRKEGG 12 + V +KEGG Sbjct: 270 DEPPV--QKEGG 279 [21][TOP] >UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4 Length = 209 Score = 144 bits (362), Expect = 6e-33 Identities = 88/191 (46%), Positives = 115/191 (60%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399 ++DA++ +V+ K+ + L E+DV LS R PR + EVT+YT Sbjct: 12 ITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSV------ARNPRINPKQTAEVTIYTNG- 64 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGPNRLKFSEVILPLPSE 222 V+RAEE +E Y SIDLVS I R+LRK KE+ D H R + P V +PL ++ Sbjct: 65 SVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP------VVSVPLVTD 118 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 D TP EL EEVVRTKYF MPP+T+ EA++QLE+VDHDFY FRN ETGEI Sbjct: 119 LTGDR---TP------ELPEEVVRTKYFAMPPMTLREALEQLELVDHDFYMFRNAETGEI 169 Query: 41 NIVYKRKEGGY 9 N++Y+R GGY Sbjct: 170 NVIYERNHGGY 180 [22][TOP] >UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative, expressed n=1 Tax=Oryza sativa Japonica Group RepID=Q10AC8_ORYSJ Length = 241 Score = 140 bits (352), Expect = 9e-32 Identities = 70/100 (70%), Positives = 84/100 (84%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L++ VK+H+E+K GR + KHS LV+EVDVRLS RGG E RGP+ RCE+TL+TKRHGV+ Sbjct: 92 LNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELSRGPKICRCEITLFTKRHGVI 150 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 270 RAEE AE+TY SIDL SSII+RKLRKIKEKETD RH+KG Sbjct: 151 RAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG 189 [23][TOP] >UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR Length = 127 Score = 140 bits (352), Expect = 9e-32 Identities = 80/146 (54%), Positives = 97/146 (66%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D VK+HVEDKVG+ +QK S+LVREVD RLS R GGE G+GPR R+C RHGVV Sbjct: 3 LTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVR-GGELGKGPRIRKC-------RHGVV 54 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE +ET Y +IDLV SIIQ KLRK+KE E+DHGRHMKG NRLK D Sbjct: 55 RAEEDSETIYATIDLVLSIIQSKLRKMKE-ESDHGRHMKGLNRLKI------------RD 101 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDM 132 + + +K+D++ L E V Y M Sbjct: 102 DADAVSRKEDDDYLDELVSVASYHQM 127 [24][TOP] >UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT Length = 213 Score = 137 bits (346), Expect = 4e-31 Identities = 82/190 (43%), Positives = 113/190 (59%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRRC-EVTLYTKRH 399 ++DA++++V K+ + + + EVDV LS R PR TR+ EVT+Y Sbjct: 12 ITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQAAEVTIYANG- 64 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 V+RAEE +E Y SIDLV+ I R+LRK KE++ D + L +E I+P Sbjct: 65 SVIRAEESSENLYASIDLVADKISRQLRKYKERKQD-----QKTQALPTTETIVP----- 114 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 + + D EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N ETGEIN Sbjct: 115 --ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEIN 172 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 173 VIYERNHGGY 182 [25][TOP] >UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YSA5_ANASP Length = 213 Score = 136 bits (342), Expect = 1e-30 Identities = 81/190 (42%), Positives = 112/190 (58%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRRC-EVTLYTKRH 399 ++DA++++V K+ + + + EVDV LS R PR TR+ EVT+Y Sbjct: 12 ITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQAAEVTIYANG- 64 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 V+RAEE +E Y SIDLV+ I R+LRK KE++ D + +E I+P Sbjct: 65 SVIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQAQPT-----TETIVP----- 114 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 + + D EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N ETGEIN Sbjct: 115 --ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEIN 172 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 173 VIYERNHGGY 182 [26][TOP] >UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IVM1_NOSP7 Length = 214 Score = 135 bits (341), Expect = 2e-30 Identities = 82/190 (43%), Positives = 112/190 (58%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRRC-EVTLYTKRH 399 ++DA++++V K+ + + EVDV LS R PR TR+ EVT+Y Sbjct: 12 ITDAIREYVHQKIEKAASHFQSITNEVDVHLSV------ARNPRINTRQAAEVTIYANG- 64 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 V+RAEE +E Y SIDLV+ I R+LRK KE+ D + P + +E ++P D Sbjct: 65 SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDQ-KTQSQPTEVVVAESVVPDLIGD 123 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 TP EL EVVRTKYF MPP+T+ EA++QL++V HDFY FRN ETGEIN Sbjct: 124 R------TP------ELPNEVVRTKYFSMPPMTLAEALEQLQLVGHDFYMFRNSETGEIN 171 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 172 VIYERNHGGY 181 [27][TOP] >UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DKM6_THEEB Length = 209 Score = 135 bits (340), Expect = 2e-30 Identities = 81/187 (43%), Positives = 109/187 (58%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++D ++ ++ K+ R ++ EVDV LS P+ + EVT++ V+ Sbjct: 12 ITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRS--TAPK-QTAEVTVFVNG-SVI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE +E Y SIDLV+ I RKLRK+KEK D R K N + EV+ L + Sbjct: 68 RAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR-AKDTNSVVEPEVVTDLVGDR--- 123 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 TPQ L E+VVR KYF MPP+T+ EA++ LEMVDHDFY FRN +TGEIN+VY Sbjct: 124 ----TPQ------LPEQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFRNRDTGEINVVY 173 Query: 29 KRKEGGY 9 +R GGY Sbjct: 174 ERNHGGY 180 [28][TOP] >UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JS19_SYNJA Length = 191 Score = 135 bits (339), Expect = 3e-30 Identities = 83/191 (43%), Positives = 111/191 (58%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRRCEVTLYTKRH 399 ++DA++ +V++K+ R ++ + + EVDV LS R PR + EVT+Y Sbjct: 13 ITDAIRSYVQEKIERAVKHFAQITSEVDVNLSV------ARNPRISANQSAEVTVYANGT 66 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKFSEVILPLPSE 222 V+RAEE +E Y SID V+ + RKLRK KE+ H RH K S + P Sbjct: 67 -VIRAEESSENLYASIDRVADKLARKLRKYKERNGVHRIRHSP-----KTSVAVAQQPLT 120 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 D + + + EL EVVRTKYF MPP+TV EA+ QLE+VDHDFY FRN E GEI Sbjct: 121 DPLNT-------ERQAELPPEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEI 173 Query: 41 NIVYKRKEGGY 9 N++Y RK GGY Sbjct: 174 NVIYVRKHGGY 184 [29][TOP] >UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CDL4_ACAM1 Length = 212 Score = 135 bits (339), Expect = 3e-30 Identities = 78/191 (40%), Positives = 116/191 (60%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399 ++DA++++V K+ + + L E+DV LS R PR + EVTL+ Sbjct: 12 ITDAIREYVHQKIEKAANHYQNLTTEIDVHLSV------ARNPRITTKQTAEVTLFVNG- 64 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 V+RAEE +E Y SIDLV+ I R+LRK KEK R KGPN+ + L + + Sbjct: 65 SVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNKGSNRSKAVALQTPE 119 Query: 218 EEDEI-EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 E+ I ++T +D EL EEVVR KYF + P++V +A++QL++VDHDFY F N +TG++ Sbjct: 120 EQPLIGDLT--RDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDFYVFENADTGQL 177 Query: 41 NIVYKRKEGGY 9 N++Y+R GGY Sbjct: 178 NVIYERNHGGY 188 [30][TOP] >UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB Length = 190 Score = 133 bits (334), Expect = 1e-29 Identities = 82/191 (42%), Positives = 110/191 (57%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRRCEVTLYTKRH 399 ++DA++ +V++K+ R + + + EVDV LS R PR ++ EVT+Y Sbjct: 13 ITDAIRSYVQEKIERAVSHFAQITSEVDVNLSV------ARNPRISASQSAEVTVYANGT 66 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKFSEVILPLPSE 222 V+RAEE +E Y SID V+ + RKLRK KE+ H RH K S + P Sbjct: 67 -VIRAEESSENLYASIDRVADKLARKLRKYKERNGIHRVRHTP-----KTSVAVAQQPVT 120 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 D + + + EL EVVRTKYF MPP+TV EA+ QLE+VDHDFY FRN E GEI Sbjct: 121 DPLNT-------ERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEI 173 Query: 41 NIVYKRKEGGY 9 N++Y R GGY Sbjct: 174 NVIYVRNHGGY 184 [31][TOP] >UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc azollae' 0708 RepID=B9YPU1_ANAAZ Length = 214 Score = 132 bits (333), Expect = 1e-29 Identities = 80/190 (42%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399 ++DA++++V K+ R + + EV+V LS R PR + EVT+Y Sbjct: 12 ITDAIREYVHQKIERAVNHFQSITNEVNVHLSV------ARNPRISTKQAAEVTIYANG- 64 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 V+RAEE +E Y SIDLV+ I R+LRK KE+ DH N +E + D Sbjct: 65 SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVVAEPVADSLIGD 124 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 TP EL EVVRTKYF MPP+T+ EA +QL++V HDFY FRN ETGEIN Sbjct: 125 R------TP------ELPGEVVRTKYFPMPPMTLAEAQEQLQLVGHDFYMFRNAETGEIN 172 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 173 VIYERNHGGY 182 [32][TOP] >UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP Length = 213 Score = 132 bits (331), Expect = 2e-29 Identities = 78/190 (41%), Positives = 108/190 (56%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399 ++DA++++V K+ + + + EVDV LS R PR + EVT++ Sbjct: 12 ITDAIREYVHQKIEKAVSHFQNITNEVDVHLSV------ARNPRITTKQAAEVTIFANG- 64 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 V+RAEE +E Y SIDLV+ I R+LRK KE+ D + N +V++P P Sbjct: 65 SVIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTN-----QVLVPEP--- 116 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 + D EL EVVRTKYF MPP+TV EA +QL++V HDFY F N ETGEIN Sbjct: 117 ----VAADLIGDRTPELPNEVVRTKYFSMPPMTVAEATEQLQLVGHDFYMFHNAETGEIN 172 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 173 VIYERNHGGY 182 [33][TOP] >UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YEZ8_MICAE Length = 199 Score = 130 bits (328), Expect = 5e-29 Identities = 76/187 (40%), Positives = 111/187 (59%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A+ +VE K+ + ++ + + +VDV LS R P + EVT+Y V+ Sbjct: 12 VTEAIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHKAEVTVYANGT-VI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RA+E +E Y SIDLVS I R+LRK KE+ DH H + +K SEV+ P +D Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTH----STVKTSEVVQEKPLDDNLI 123 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 D EL EVVR KYF MPP+T+ EA+ QL++VDHDF+ F N++T EIN++Y Sbjct: 124 G-------DRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFFMFCNKDTNEINVIY 176 Query: 29 KRKEGGY 9 +R GG+ Sbjct: 177 QRNHGGF 183 [34][TOP] >UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VJW0_9CYAN Length = 215 Score = 129 bits (323), Expect = 2e-28 Identities = 80/190 (42%), Positives = 110/190 (57%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399 ++D+++++V K+ + + + EVDV LS R PR + EVT+Y + Sbjct: 12 ITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSV------ARNPRINTKQTAEVTIYANKT 65 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 V+RA+E +E Y SIDLV+ IQR+LRK KEK+ K + K VI P Sbjct: 66 -VIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ-----QKKTQTQPKTGAVIHEAPVV- 118 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 ED I D EL EVVR KYF MPP+T+ EA +QL++VDHDFY FRN +T EIN Sbjct: 119 -EDLIG-----DRTPELPTEVVRMKYFAMPPMTIEEATEQLQLVDHDFYMFRNAKTDEIN 172 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 173 VIYERNHGGY 182 [35][TOP] >UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YIH4_9CYAN Length = 212 Score = 129 bits (323), Expect = 2e-28 Identities = 80/191 (41%), Positives = 114/191 (59%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399 +++A+ ++V K+ + + + L EVDV LS R PR + EVT+Y Sbjct: 12 ITEAIHEYVHQKITKAVSHYQQLTNEVDVHLS------IARNPRINPKQTAEVTIYANGT 65 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 V+RA+E +E Y SIDLV+ I R+LRK K+K G+H+ P K +EV+ P Sbjct: 66 -VIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP---KLAEVVENQPVI- 118 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 ED I D + EL EVVRTKYF MPP+ + +A++QL++VDHDFY F N +TGE+N Sbjct: 119 -EDLIG-----DRQPELPPEVVRTKYFAMPPMNLQDALEQLQLVDHDFYVFCNADTGELN 172 Query: 38 IVYKR-KEGGY 9 ++YKR GGY Sbjct: 173 VIYKRVNHGGY 183 [36][TOP] >UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA Length = 212 Score = 128 bits (322), Expect = 3e-28 Identities = 80/191 (41%), Positives = 110/191 (57%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399 ++DA+ ++V+ K+ + + L EVDV LS R PR + EVT+Y Sbjct: 12 ITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSV------ARNPRINPRQTAEVTIYANGT 65 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 V+RA+E +E Y SIDLV+ I R+LRK KEK R K K EV+ P D Sbjct: 66 -VIRAQESSENLYASIDLVADKIARQLRKYKEK-----RMAKQYQLPKTGEVVAQKPIVD 119 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 + D +L EEVVRTKYF MPP+++ EA++QL+++DHDFY FRN ET EIN Sbjct: 120 DLIG-------DRTVKLPEEVVRTKYFAMPPMSIQEALEQLQLIDHDFYMFRNAETDEIN 172 Query: 38 IVYKRK-EGGY 9 ++Y+R GGY Sbjct: 173 VIYQRSHHGGY 183 [37][TOP] >UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J8B2_CHLRE Length = 286 Score = 128 bits (322), Expect = 3e-28 Identities = 82/206 (39%), Positives = 113/206 (54%), Gaps = 19/206 (9%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA+K +VE+KV + + S+ ++EVDV LS RGG G + ++ EVT+YT R+GVV Sbjct: 81 VTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVV 140 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R E+ Y +IDLV I+ KL+KIKEK G P R P DEED Sbjct: 141 RVEDAENNLYAAIDLVCDKIRAKLQKIKEKAISRG---AWPGRAG------PKEDVDEED 191 Query: 209 ------EIEITPQKDDEEELIE------------EVVRTKYFDM-PPLTVFEAIDQLEMV 87 E+++ Q D+EE ++ V+R+K + P+TV EAID LE V Sbjct: 192 FQEYLKEVKMDTQLFDKEEQLQRQFAELNRIYPANVMRSKTVVLADPITVEEAIDALEAV 251 Query: 86 DHDFYAFRNEETGEINIVYKRKEGGY 9 H FY FR T + IVYKR+ GGY Sbjct: 252 GHSFYVFREMTTDTVQIVYKRESGGY 277 [38][TOP] >UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Cyanothece RepID=C7QW97_CYAP0 Length = 205 Score = 127 bits (320), Expect = 5e-28 Identities = 75/187 (40%), Positives = 109/187 (58%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++++ +V++K+ + ++ + +VDV LS R + EVT+Y V+ Sbjct: 19 VTESIHDYVQEKLEKAVKHFQSITTKVDVHLSVARNA---RITNKHKAEVTVYANGT-VI 74 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RA+E +E+ Y SIDLVS I R+LRK KEK + K PN +K EV E + Sbjct: 75 RAQEGSESLYASIDLVSDKIARQLRKYKEKLNNK----KAPNPVKVGEVTTATAIEGDLI 130 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 D EL EV+R KYF MPP+T+ EA+ QLE+VDHDFY FRN++T EIN++Y Sbjct: 131 G-------DRTPELPAEVIRMKYFAMPPMTIDEALHQLELVDHDFYMFRNKDTDEINVIY 183 Query: 29 KRKEGGY 9 +R GGY Sbjct: 184 QRNHGGY 190 [39][TOP] >UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa NIES-843 RepID=B0JSS1_MICAN Length = 199 Score = 127 bits (319), Expect = 6e-28 Identities = 75/187 (40%), Positives = 111/187 (59%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++ + +VE K+ + ++ + + +VDV LS R P R EVT+Y V+ Sbjct: 12 VTEPIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHRAEVTVYANGT-VI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RA+E +E Y SIDLVS I R+LRK KE+ DH + +K SEV+ +E Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTNAP----VKTSEVV-------QEK 116 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 ++ + D EL EVVR KYF MPP+T+ EA+ QL++VDHDFY F N++T EIN++Y Sbjct: 117 PLDGSLIGDRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFYMFCNKDTNEINVIY 176 Query: 29 KRKEGGY 9 +R GG+ Sbjct: 177 QRNHGGF 183 [40][TOP] >UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC 6803 RepID=LRTA_SYNY3 Length = 191 Score = 127 bits (319), Expect = 6e-28 Identities = 75/187 (40%), Positives = 109/187 (58%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A+ +VE+KV R ++ L +VDV LS R + EVT+Y V+ Sbjct: 12 VTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSVARNA---RITNKHKAEVTVYANGT-VI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RA+E +E Y SIDLV+ I R+LRK KE+ D K +K SE++ E+ Sbjct: 68 RAQEGSENLYASIDLVADKIARQLRKYKERIQD-----KQHGNVKTSEIV-------EDK 115 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 +E D EL EV+R KYF MPP+ + +A++QL++VDHDFY FRN++T EIN++Y Sbjct: 116 PVEENLIGDRAPELPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFRNKDTDEINVIY 175 Query: 29 KRKEGGY 9 R GGY Sbjct: 176 IRNHGGY 182 [41][TOP] >UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7 Length = 199 Score = 127 bits (318), Expect = 8e-28 Identities = 72/187 (38%), Positives = 112/187 (59%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A+ +V+ K+ + ++ L +VDV LS + R + EVT+Y V+ Sbjct: 12 VTEAIHDYVQQKLEKAVKHFQTLTTKVDVHLSV---AKNARIQNKHKAEVTVYANGT-VI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RA+E +E Y SIDLVS I R+LRK KE++ + H + +K EV+ +++ Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH----SPVKAGEVV-------QQE 116 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 IE D + EL EVVR KYF MPP+++ EA++QL++VDHDF+ FRN +T EIN++Y Sbjct: 117 TIEENLIGDRQPELPPEVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFRNRDTNEINVIY 176 Query: 29 KRKEGGY 9 R GG+ Sbjct: 177 IRNHGGF 183 [42][TOP] >UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WZE1_CYAA5 Length = 201 Score = 125 bits (314), Expect = 2e-27 Identities = 76/187 (40%), Positives = 109/187 (58%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++++ +V K+ + ++ + L +VDV LS + R + EVT+Y V+ Sbjct: 14 VTESINDYVTQKLEKAVKHYQTLTTKVDVHLSV---AKNARITNKHKAEVTVYANGT-VI 69 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RA+E +E Y SIDLVS I R+LRK KEK +H K + +K EV+ E Sbjct: 70 RAQEGSENLYASIDLVSDKIARQLRKYKEKINNH----KPQSSVKNPEVL-------PER 118 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 EIE D E L EV+R KYF MPP+++ EA QLE+VDHDFY FRN++T EIN++Y Sbjct: 119 EIEKDLIGDREAALPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEINVIY 178 Query: 29 KRKEGGY 9 R GG+ Sbjct: 179 MRNHGGF 185 [43][TOP] >UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO Length = 284 Score = 124 bits (311), Expect = 5e-27 Identities = 72/191 (37%), Positives = 117/191 (61%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGR-GPRTRRCEVTLYTKRHG 396 ++D+++++ E+K+ + + + VREVDVR S+RGG + G ++ EVT+YT R+G Sbjct: 91 ITDSIREYAEEKINKAVAHFDQHDVREVDVRCSSRGGADKKTPGGALQKTEVTVYT-RNG 149 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRLKFSEVILPLPSED 219 ++R+EE A+ Y SID VS ++RKLRK+KEK+ + +H K + + ++ + + D Sbjct: 150 IIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKAQTDAIVEEMQAAD 209 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG-EI 42 E DE +EVVR K+ + TV+EA +++E + H F+AFRN G E+ Sbjct: 210 E--------ALADESMDYDEVVREKFHPVRKCTVYEAAEEMENLGHTFFAFRNVAQGNEV 261 Query: 41 NIVYKRKEGGY 9 N+VYKR GGY Sbjct: 262 NVVYKRDAGGY 272 [44][TOP] >UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO Length = 199 Score = 123 bits (309), Expect = 8e-27 Identities = 71/187 (37%), Positives = 110/187 (58%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A+ +V++K+ + ++ + +VDV LS + GR + EVT+Y V+ Sbjct: 12 VTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSV---AKNGRVQNKHKAEVTVYANG-AVI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RA+E +E Y SIDLVS I R+LRK KE+ + K + +K +V+ ++ Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKERRLEQ----KAYSPVKTGDVV-------QDQ 116 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 +E D + EL EVVR KYF MP +++ EA++QL++VDHDFY FRN T EIN++Y Sbjct: 117 PVEGNLIGDRQPELPPEVVRMKYFAMPLMSIEEALEQLQLVDHDFYMFRNRNTNEINVIY 176 Query: 29 KRKEGGY 9 R GGY Sbjct: 177 IRNHGGY 183 [45][TOP] >UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT Length = 199 Score = 122 bits (307), Expect = 1e-26 Identities = 73/187 (39%), Positives = 111/187 (59%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++++ +V+ K+ + ++ + +VDV LS + R + EVT+Y V+ Sbjct: 12 VTESINDYVKQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAEVTVYANGT-VI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RA+E +E Y SIDLVS I R+LRK KEK ++H K + K EV LP ++ + Sbjct: 68 RAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH----KPQSSAKLPEV---LPEKEVSE 120 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 ++ D + EL EV+R KYF MP +++ EA QLE+VDHDFY FRN+ET EIN++Y Sbjct: 121 DLI----GDRQAELPPEVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFRNQETEEINVIY 176 Query: 29 KRKEGGY 9 R GG+ Sbjct: 177 MRNHGGF 183 [46][TOP] >UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IRI7_9CHRO Length = 199 Score = 122 bits (307), Expect = 1e-26 Identities = 76/189 (40%), Positives = 110/189 (58%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++++ +V K+ + ++ + +VDV LS + R + EVT+Y V+ Sbjct: 12 VTESINDYVTQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAEVTVYANGT-VI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH--MKGPNRLKFSEVILPLPSEDE 216 RA+E +E Y SIDLVS I R+LRK KEK +H +K P+ L +EV + Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKEKINNHKPQSSVKSPDVLPETEV--------K 119 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 ED I D E EL EV+R KYF MPP+++ EA QLE+VDHDFY FRN++T EIN+ Sbjct: 120 EDLIG-----DREVELPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEINV 174 Query: 35 VYKRKEGGY 9 +Y R GG+ Sbjct: 175 IYMRNHGGF 183 [47][TOP] >UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI Length = 215 Score = 122 bits (306), Expect = 2e-26 Identities = 76/191 (39%), Positives = 105/191 (54%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399 ++D++ ++V K+ + + L EVDV LS R PR + EVT+Y Sbjct: 12 ITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSV------ARNPRINPKQTAEVTIYANGT 65 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 V+RA+E +E Y SIDLV+ I R+LRK KEK K + ++ V+ L Sbjct: 66 -VIRAQESSENLYASIDLVADKIARQLRKYKEKRQSKVNKTKTVDLIESQPVVENLIG-- 122 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 D + EL EVVRTKYF MP +TV EA++QL+++DHDFY F N TGEIN Sbjct: 123 -----------DRQAELPSEVVRTKYFPMPSMTVEEALEQLQLIDHDFYMFSNGVTGEIN 171 Query: 38 IVYKR-KEGGY 9 ++YKR GGY Sbjct: 172 VIYKRYHHGGY 182 [48][TOP] >UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE Length = 224 Score = 121 bits (304), Expect = 3e-26 Identities = 72/188 (38%), Positives = 110/188 (58%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ HV K+ + L+ +VDV LS + P+ + EVT++ + VV Sbjct: 12 ITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQNNPRIA--PK-QTAEVTVFLN-NVVV 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED-EE 213 RAEE +E+ Y SID+V+ + R+LRK KEK D P ++V + + D Sbjct: 68 RAEESSESLYASIDMVTDKLTRQLRKYKEKRRDQDHATVRP-----TDVDATINAPDITS 122 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 +I+ + + +L + VVR+KYF MPP+TV A++ LE+V HDFY FRN ETGEIN++ Sbjct: 123 HNADISEVLNHQPKLPDTVVRSKYFAMPPMTVQTALENLELVGHDFYMFRNVETGEINVI 182 Query: 32 YKRKEGGY 9 Y+R GY Sbjct: 183 YERNHKGY 190 [49][TOP] >UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307 RepID=A5GUZ2_SYNR3 Length = 187 Score = 121 bits (303), Expect = 4e-26 Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 7/194 (3%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 ++ A++ + E K+ R + + +V+E DV LS R PR + EVTL+ Sbjct: 12 VTPALRDYTETKLSRAVSHFNGMVQEADVHLSV------ARNPRVPQQTAEVTLFASGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RA+E ++ Y SIDLV+ + R+L++ K++ HG H D Sbjct: 65 VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH------------------SDL 106 Query: 215 EDEIEITPQKDD-----EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEET 51 + E E+ P + D EL VVR KYF MPP++V EAI QLE++DHDFY FRN + Sbjct: 107 QAEPEVMPLQGDMLQGRHAELPAPVVRRKYFAMPPMSVEEAIHQLEVIDHDFYVFRNADN 166 Query: 50 GEINIVYKRKEGGY 9 GE+ +VY+R GGY Sbjct: 167 GELQVVYQRNHGGY 180 [50][TOP] >UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002 RepID=LRTA_SYNP2 Length = 193 Score = 120 bits (301), Expect = 7e-26 Identities = 74/187 (39%), Positives = 104/187 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++++ +VE K+ + + +VDV LS R + EVT+Y V+ Sbjct: 12 VTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNA---RITDKHKAEVTVYANGT-VI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RA+E +E Y SIDLVS I R+LRK KEK H++ K SEV+ ED Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQE----KTSEVL-------PED 116 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + D EL EVVR KYF MPP+T+ EA++QL++VDHDFY F N++T IN++Y Sbjct: 117 PVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIY 176 Query: 29 KRKEGGY 9 R GGY Sbjct: 177 IRNHGGY 183 [51][TOP] >UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7 Length = 207 Score = 118 bits (295), Expect = 4e-25 Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 1/185 (0%) Frame = -2 Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381 A+ +V+ K+ + + + + E+DV LS + + + EVT+Y V+RAE Sbjct: 15 AIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAEVTIYANGT-VIRAE 70 Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIE 201 E E Y SIDLVS I R+L+K KEK D KG +L +E ++ D Sbjct: 71 ECNENLYASIDLVSDKITRQLKKYKEKLRDR----KG--QLSTAET-----ADQLSDGAL 119 Query: 200 ITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24 +T + + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN TGEIN++Y+R Sbjct: 120 VTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEINVIYER 179 Query: 23 KEGGY 9 GGY Sbjct: 180 NHGGY 184 [52][TOP] >UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. CC9311 RepID=Q0ICJ8_SYNS3 Length = 191 Score = 117 bits (294), Expect = 5e-25 Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 ++ A++++ E K+ R I LV+E DV LS R PR + EVT++ Sbjct: 12 VTPALREYTETKLERAIHHFDDLVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DHG H P ++ P+ED Sbjct: 65 VIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG-HRTTPTAAN-DVLLTERPTEDS 122 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 E E +L VR KYF MP +++ EA QLE++DHDFY FR++E+GE+ + Sbjct: 123 LLE-------GKEAQLPSPGVRRKYFAMPAMSLEEARHQLELIDHDFYLFRDKESGELQV 175 Query: 35 VYKRKEGGY 9 +Y R GG+ Sbjct: 176 IYHRNHGGF 184 [53][TOP] >UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803 RepID=A5GJ89_SYNPW Length = 195 Score = 117 bits (292), Expect = 8e-25 Identities = 71/190 (37%), Positives = 109/190 (57%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 ++ A++ + E K+ R I LV+E DV LS R PR + EVT++ Sbjct: 12 VTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G + SE P Sbjct: 65 VIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH-HHSHGH---RASET--PTTESVL 118 Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 +DE + D +E +L VR KYF MPP+T+ +A QL+++DHDFY FR+ +G++ Sbjct: 119 DDEAIVESLLDGKEVQLPSPGVRRKYFSMPPMTLEQARQQLDLIDHDFYLFRDSASGDLQ 178 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 179 VIYRRNHGGY 188 [54][TOP] >UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus PCC 6301 RepID=Q5N179_SYNP6 Length = 207 Score = 116 bits (291), Expect = 1e-24 Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 1/185 (0%) Frame = -2 Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381 A+ +V+ K+ + + + + E+DV LS + + + EVT+Y V+RAE Sbjct: 15 AIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAEVTIYANGT-VIRAE 70 Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIE 201 E E Y SIDLVS I R+L+K KE+ D KG +L +E ++ D Sbjct: 71 ECNENLYASIDLVSDKITRQLKKYKEELRDR----KG--QLSTAET-----ADQLSDGAL 119 Query: 200 ITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24 +T + + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN TGEIN++Y+R Sbjct: 120 VTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEINVIYER 179 Query: 23 KEGGY 9 GGY Sbjct: 180 NHGGY 184 [55][TOP] >UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805 RepID=A4CWK2_SYNPV Length = 195 Score = 116 bits (291), Expect = 1e-24 Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 ++ A++ + E K+ R I LV+E DV LS R PR + EVT++ Sbjct: 12 VTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G K SE P Sbjct: 65 VIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH-HHSHGH---KASET--PTTEAVL 118 Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 ++E + D +E +L VR KYF MPP+T+ +A QL+++DHDFY FR+ ++GE+ Sbjct: 119 DNEAVVESLLDGKEVQLPSPGVRRKYFAMPPMTLEQARQQLDLIDHDFYVFRDSDSGELQ 178 Query: 38 IVYKRKEGGY 9 ++Y R GGY Sbjct: 179 VIYHRNHGGY 188 [56][TOP] >UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9 Length = 195 Score = 115 bits (289), Expect = 2e-24 Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 ++ A++++ K+ R +RE DV LS R PR + EVT++ Sbjct: 12 ITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE-D 219 V+RA+E +E Y SIDLV + R+LRK KE+ DH H G S + P E Sbjct: 65 VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HSASLTPSTEEVS 118 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 +E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY FR+ +TG++ Sbjct: 119 DESAVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFRDSKTGDLQ 178 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 179 VIYRRNHGGY 188 [57][TOP] >UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IMZ9_9CHRO Length = 195 Score = 115 bits (289), Expect = 2e-24 Identities = 73/193 (37%), Positives = 105/193 (54%), Gaps = 6/193 (3%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR--CEVTLYTKRHG 396 ++ A++++ E K+ R I +V+E DV LS R PR + EVT++ Sbjct: 12 VTPAIREYTETKLTRAITHFEGMVKEADVHLSV------ARNPRVPQQIAEVTMFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE----VILPLP 228 V+RA+EH++ Y SIDLV+S + R+L + KE+ H RH +R E LP P Sbjct: 65 VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRSARDEEAGAASLPPP 122 Query: 227 SEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 48 D E EL VR KYF MPP+++ EA+ QLE++DHDFY FR E+G Sbjct: 123 GSSLTD--------GKEPELPSRGVRRKYFAMPPMSLDEALHQLELIDHDFYVFREAESG 174 Query: 47 EINIVYKRKEGGY 9 +I +VY R GG+ Sbjct: 175 QIQVVYHRNHGGF 187 [58][TOP] >UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. AS9601 RepID=A2BPM8_PROMS Length = 194 Score = 115 bits (287), Expect = 3e-24 Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++ Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222 V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L P+ S Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL-------PIESM 117 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 + + ++ E L E ++ KYF+M P++ EA QL+++DHDFY FRN++ E+ Sbjct: 118 ESNFLDKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNEL 177 Query: 41 NIVYKRKEGGY 9 ++YKR GGY Sbjct: 178 QVIYKRNHGGY 188 [59][TOP] >UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3ZA02_9SYNE Length = 195 Score = 115 bits (287), Expect = 3e-24 Identities = 68/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A++ + + K+ R +Q +V+E DV LS R PR + EVT++ Sbjct: 12 LTPALRDYTQSKLERAVQHFDDMVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H +R + P + + Sbjct: 65 VIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH--HHSNGHRASETP---PTDAIAD 119 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 I+ + E +L + VR KYF MPP+++ EA QL+++DHDFY FR+ TG++ + Sbjct: 120 AAPIDGSLLDGKEVQLPDPGVRRKYFAMPPMSLEEARHQLDVIDHDFYLFRDASTGDLQV 179 Query: 35 VYKRKEGGY 9 +Y+R GGY Sbjct: 180 IYRRNHGGY 188 [60][TOP] >UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9301 RepID=A3PBB8_PROM0 Length = 194 Score = 114 bits (286), Expect = 4e-24 Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++ Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222 V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L P+ S Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL-------PIESM 117 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 + + ++ E L E ++ KYF+M P++ EA QL+++DHDFY FRN++ E+ Sbjct: 118 ESNFLDKAFFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNEL 177 Query: 41 NIVYKRKEGGY 9 ++YKR GGY Sbjct: 178 QVIYKRNHGGY 188 [61][TOP] >UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9303 RepID=A2CBL6_PROM3 Length = 195 Score = 114 bits (286), Expect = 4e-24 Identities = 69/191 (36%), Positives = 110/191 (57%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A++++ + K+ R IQ +V+E DV LS R P + EVT++ Sbjct: 12 LTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSE 222 V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G + +E ++ Sbjct: 65 VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTEAVI----- 118 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 +E I+ + E L VR KYF MPP++V +A QL+++DHDFY FR +E+G++ Sbjct: 119 -DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARHQLDLIDHDFYLFREQESGQL 177 Query: 41 NIVYKRKEGGY 9 ++Y+R GGY Sbjct: 178 QVIYRRNHGGY 188 [62][TOP] >UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9515 RepID=A2BV60_PROM5 Length = 194 Score = 114 bits (285), Expect = 5e-24 Identities = 67/190 (35%), Positives = 108/190 (56%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++ Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRLSYQTAEVTIFASGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 ++RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F+ + + Sbjct: 65 IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHYKNLNYNLEKNKHSFTN------TNEH 118 Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 D I+ D E +L E ++ KYF+M P+++ EA QL+++DHDFY FRN++ E+ Sbjct: 119 LDSIDKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFYVFRNKKNNELQ 178 Query: 38 IVYKRKEGGY 9 ++YKRK GGY Sbjct: 179 VIYKRKHGGY 188 [63][TOP] >UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus str. MIT 9313 RepID=Q7V8W0_PROMM Length = 195 Score = 114 bits (284), Expect = 7e-24 Identities = 69/191 (36%), Positives = 110/191 (57%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A++++ + K+ R IQ +V+E DV LS R P + EVT++ Sbjct: 12 LTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSE 222 V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G + +E ++ Sbjct: 65 VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTEAVI----- 118 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 +E I+ + E L VR KYF MPP++V +A QL+++DHDFY FR +E+G++ Sbjct: 119 -DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARYQLDLIDHDFYLFREQESGQL 177 Query: 41 NIVYKRKEGGY 9 ++Y+R GGY Sbjct: 178 QVIYRRNHGGY 188 [64][TOP] >UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus marinus clone HF10-88F10 RepID=Q1PJW9_PROMA Length = 194 Score = 113 bits (282), Expect = 1e-23 Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 6/193 (3%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++ Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222 V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H K N+ F PSE Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK--NKESF-------PSE 115 Query: 221 DEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 48 + E E + E L E ++ KYF+M P++ EA QL+++DHDFY FRN++ Sbjct: 116 NTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNN 175 Query: 47 EINIVYKRKEGGY 9 ++ ++YKR GGY Sbjct: 176 QLQVIYKRNHGGY 188 [65][TOP] >UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI Length = 187 Score = 112 bits (281), Expect = 1e-23 Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR---CEVTLYTKRH 399 +++ ++ +V K+ +V L VDV LS R PR R EVT+ Sbjct: 12 VTEPIRDYVSSKLDKVFAHFDQLTMGVDVYLSV------ARNPRISRSHSAEVTVQASGT 65 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 ++RAEE E Y SIDLV+ + R++RK KE+ + G ++ + LP+ D Sbjct: 66 -IIRAEEETENLYASIDLVADKLHRQMRKYKERMQKKPKPKTG--LAVANQAPISLPNGD 122 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 E+ L +EVVRTKYF MPP++ EA+D L +VDHDF+ FRN E+GEIN Sbjct: 123 EK-----------ATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFFVFRNAESGEIN 171 Query: 38 IVYKRKEGGY 9 ++Y R GGY Sbjct: 172 VLYARNHGGY 181 [66][TOP] >UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE Length = 195 Score = 112 bits (280), Expect = 2e-23 Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 ++ A++++ K+ R +RE DV LS R PR + EVT++ Sbjct: 12 ITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE-D 219 V+RA+E +E Y SIDLV + R+LRK KE+ DH H G S + P E Sbjct: 65 VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HSASLTPSTEEVS 118 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 +E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY F++ TG + Sbjct: 119 DESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFKDSATGALQ 178 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 179 VIYRRNHGGY 188 [67][TOP] >UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916 RepID=Q05SE1_9SYNE Length = 195 Score = 112 bits (280), Expect = 2e-23 Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Frame = -2 Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHGVVR 387 A++++ E K+ R +Q + +V E DV LS R PR + EVT++ V+R Sbjct: 15 ALREYTESKLERAVQHYDEMVVEADVHLSV------ARNPRVPQQTAEVTVFANGT-VIR 67 Query: 386 AEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSEDEED 210 A+E +E Y SIDLV++ + R+LR+ KE+ +DH H + +E +L ++ Sbjct: 68 AQERSENLYASIDLVANKLSRQLRRYKERHSDHHHSHGHRASTTPTTEAVL------DDS 121 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 ++ + E L + VR KYF MPP++V EA QL+++DHDF+ FR+ + E+ ++Y Sbjct: 122 AVDGSLLDGKEAHLPDPGVRRKYFPMPPMSVEEARHQLDLIDHDFFLFRDASSKELQVIY 181 Query: 29 KRKEGGY 9 +R GGY Sbjct: 182 RRNHGGY 188 [68][TOP] >UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N7A9_9CHLO Length = 245 Score = 112 bits (279), Expect = 3e-23 Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 6/193 (3%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 +++A++ + E K+ + + + VREVDV S R E +G + +VT+YT R+GV Sbjct: 57 ITEAIRDYCEQKINKAVSHFDMHDVREVDVTCSARS--EKQQGGDLQMTQVTVYT-RNGV 113 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH--GRHMKGPNRLKFSEVILPLPSED 219 VR+EE A+ Y SID VS I+RKLRKIKEK+ G+ P + + ++++ D Sbjct: 114 VRSEEEADNLYASIDAVSDKIERKLRKIKEKKNSKKAGKTKANP-KAQTADIVAAAAEAD 172 Query: 218 E--EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEET-G 48 E DEIE EE V KY + T EA +++E + H FYAF+N+ G Sbjct: 173 EARADEIE-----------FEETVGVKYMAVKTSTAMEAAEEMESLGHVFYAFKNKANGG 221 Query: 47 EINIVYKRKEGGY 9 E+N+VYKR GGY Sbjct: 222 EVNVVYKRDAGGY 234 [69][TOP] >UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured Prochlorococcus marinus clone ASNC2259 RepID=Q1PKX8_PROMA Length = 194 Score = 111 bits (278), Expect = 3e-23 Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++ Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222 V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L P+ S Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL-------PIESM 117 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 + + + E L + ++ KYF+M P++ EA QL+++DHDFY FRN++ E+ Sbjct: 118 ESNFLDKAFFIEGTEASLPKPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNEL 177 Query: 41 NIVYKRKEGGY 9 ++YKR GGY Sbjct: 178 QVIYKRNHGGY 188 [70][TOP] >UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str. MIT 9215 RepID=A8G3B2_PROM2 Length = 194 Score = 111 bits (277), Expect = 4e-23 Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++ Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F L ++ E Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF------LIADTE 118 Query: 215 EDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 ++ KD E L E ++ KYF+M P++ EA QL+++DHDFY FRN + E+ Sbjct: 119 SRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNNKNNELQ 178 Query: 38 IVYKRKEGGY 9 ++YKR GGY Sbjct: 179 VIYKRNHGGY 188 [71][TOP] >UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT 9202 RepID=B9P0E9_PROMA Length = 194 Score = 111 bits (277), Expect = 4e-23 Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++ Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F P+ + Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF-----PIADTES 119 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 E + E L E ++ KYF+M P++ EA QL+++DHDFY FRN + E+ + Sbjct: 120 RFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNSKNNELQV 179 Query: 35 VYKRKEGGY 9 +YKR GGY Sbjct: 180 IYKRNHGGY 188 [72][TOP] >UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP Length = 194 Score = 110 bits (274), Expect = 1e-22 Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ +K++ E K+ + + +V+E D+ LS + PR + EVT++ Sbjct: 12 LTGPLKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 ++RAEE E Y SIDLVS+ + RKLRK KE+ + N+ +S I +E Sbjct: 65 IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKNSYSNAI------EE 118 Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 D I+ ++ E L E ++ KYF+M P+++ EA QL+ +DHDFY FRN+ E+ Sbjct: 119 SDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFYLFRNKLNNELQ 178 Query: 38 IVYKRKEGGY 9 ++YKR GGY Sbjct: 179 VIYKRNHGGY 188 [73][TOP] >UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U8F3_SYNPX Length = 195 Score = 109 bits (272), Expect = 2e-22 Identities = 63/190 (33%), Positives = 108/190 (56%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 ++ A++ + + K+ R VRE DV LS R PR + EVT++ Sbjct: 12 ITPALRDYTQTKLERATHHFGNAVREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSED 219 V+RA+E +E Y SIDL +S + R+LR+ KE+ +DH H + +E + Sbjct: 65 VIRAQERSENLYASIDLAASKLARQLRRWKERHSDHHHSHGHSASTTPATEAVT------ 118 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 ++ +++ + + E EL + VR KYF MPP+++ EA QL+++DHDFY FR++++ ++ Sbjct: 119 DDSQVDGSLLQGREAELPDPGVRRKYFAMPPMSLEEARRQLDLIDHDFYLFRDKDSDQLQ 178 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 179 VIYRRNHGGY 188 [74][TOP] >UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Prochlorococcus marinus str. MIT 9312 RepID=Q31CD8_PROM9 Length = 194 Score = 109 bits (272), Expect = 2e-22 Identities = 65/187 (34%), Positives = 101/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+ A+K++ + K+ + + +V+E D+ LS E + EVT++ V+ Sbjct: 12 LTGALKEYTQAKIEKATHHYKDIVKEADIHLSI----EKNPSVSLQTAEVTIFANGT-VI 66 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE E Y SIDLVS+ + RKLRK KE+ + N F P+ S D Sbjct: 67 RAEEKTENLYSSIDLVSNKLCRKLRKYKERNYKTNYINQFKNNESF-----PIESADSNV 121 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + ++ E L E ++ KYF+M P++ EA QL+++DHDFY FRN++ E+ ++Y Sbjct: 122 LDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNNELQVIY 181 Query: 29 KRKEGGY 9 KR GGY Sbjct: 182 KRNHGGY 188 [75][TOP] >UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YVD7_9SYNE Length = 195 Score = 108 bits (271), Expect = 2e-22 Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 6/193 (3%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR--CEVTLYTKRHG 396 ++ A++ + E K+GR I + LV+E DV LS R PR + EVT++ Sbjct: 12 VTPAIRDYTEAKLGRAINHYEGLVKEADVHLSV------ARNPRVAQQTAEVTVFANGV- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RA+E +E Y SID+V+ + R+LR+ K++ ++H N + + E Sbjct: 65 VIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNHHGAGSPAN----------VGDDTE 114 Query: 215 EDEIE-ITPQK---DDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 48 + +E + P D E L VR KYF MP +++ +A+ QLE++DHDFY FR E +G Sbjct: 115 QPSLEGVLPNDLIGDREPALPVPAVRRKYFSMPAMSLDQALHQLELIDHDFYVFREESSG 174 Query: 47 EINIVYKRKEGGY 9 + +VY+R GG+ Sbjct: 175 GLQVVYRRNHGGF 187 [76][TOP] >UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC Length = 195 Score = 108 bits (270), Expect = 3e-22 Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 ++ A++ + + K+ R VRE DV LS R PR + EVT++ Sbjct: 12 ITPALRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSED 219 V+RA+E +E Y SIDL + + R+LR+ KE+ +DH H + ++V+ + Sbjct: 65 VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDVV------N 118 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 + +E + + E EL + VR KYF MPP+ + EA QL+++DHDFY FR +E+ ++ Sbjct: 119 DASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFYLFREKESDQLQ 178 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 179 VIYRRNHGGY 188 [77][TOP] >UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. NATL1A RepID=A2C0K6_PROM1 Length = 194 Score = 107 bits (268), Expect = 5e-22 Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ +++ + + K+ + +V+E DV LS R PR + EVT++ Sbjct: 12 LTPSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RA+E +E Y SIDLV++ + R+LRK KE+ H H + +E I S D Sbjct: 65 VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHNNQSTKSVQNEKIENFSSSDH 124 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 + + E L VR KYF+M P+T+ +A QL+++DHDFY FR EE + + Sbjct: 125 ------SLIEGKEPHLPNPGVRRKYFEMDPMTIEQARVQLDLIDHDFYLFREEEGSALRV 178 Query: 35 VYKRKEGGY 9 +Y+R GGY Sbjct: 179 IYRRNHGGY 187 [78][TOP] >UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Prochlorococcus marinus str. NATL2A RepID=Q46H11_PROMT Length = 194 Score = 107 bits (266), Expect = 8e-22 Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ +++ + + K+ + +V+E DV LS R PR + EVT++ Sbjct: 12 LTQSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RA+E +E Y SIDLV++ + R+LRK KE+ H H + +E S D Sbjct: 65 VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHHNQSTKSVQNEDTQNFSSSDH 124 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 +T K E L VR KYF+M P+ + +A QL+++DHDFY FR EE + + Sbjct: 125 S----LTEGK--EPHLPSPGVRRKYFEMTPMNIEQARVQLDLIDHDFYLFREEEGSALRV 178 Query: 35 VYKRKEGGY 9 +YKR GGY Sbjct: 179 IYKRNHGGY 187 [79][TOP] >UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8Z3_9ACTN Length = 192 Score = 107 bits (266), Expect = 8e-22 Identities = 67/187 (35%), Positives = 93/187 (49%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +SDA++ HV+ KVG ++ DV L P + CEVT+Y R+ VV Sbjct: 13 VSDALRDHVQHKVGDALKVFDITPMSCDVVLRVDKNHS---NPDRKTCEVTVYV-RNNVV 68 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R E +E Y +ID S + R+LRK K + D + + P P PS+D D Sbjct: 69 RVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP---------APAPSKDLSD 119 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 I+ D +VR KY D+ P+T EA+ Q +++ HDFY F N TG IN+VY Sbjct: 120 LIDEVADDD-------MLVREKYIDLHPMTEEEALVQTDLIGHDFYVFENATTGLINVVY 172 Query: 29 KRKEGGY 9 R GGY Sbjct: 173 HRHNGGY 179 [80][TOP] >UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus RepID=Q7VDH9_PROMA Length = 195 Score = 106 bits (265), Expect = 1e-21 Identities = 65/190 (34%), Positives = 109/190 (57%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 L+ A++++ + K+ + I +V+E DV LS + PR + EVT++ Sbjct: 12 LTPALREYTKSKLEKAIHHFGDMVKEADVHLSV------AKNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RA+E ++ Y SIDLVS+ + R+LR+ KE+ +DH H +R I P E Sbjct: 65 VIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH--HHSPGHRAS----ITPTTEEVL 118 Query: 215 EDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 ED+ I + + E +L + +R KYF M P+ + +A QL+++DHDFY F+ E+ ++ Sbjct: 119 EDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFYLFKEAESEQLQ 178 Query: 38 IVYKRKEGGY 9 ++Y+RK GGY Sbjct: 179 VIYRRKNGGY 188 [81][TOP] >UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109 RepID=D0CH01_9SYNE Length = 195 Score = 105 bits (263), Expect = 2e-21 Identities = 62/190 (32%), Positives = 105/190 (55%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396 ++ +++ + + K+ R VRE DV LS R PR + EVT++ Sbjct: 12 ITPSLRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSED 219 V+RA+E +E Y SIDL + + R+LR+ KE+ +DH H + ++V+ + Sbjct: 65 VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDVV------N 118 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 + +E + + E EL + VR KYF MPP+ + +A QL+++DHDFY FR +E+ ++ Sbjct: 119 DASPVESSLLQGREAELPDPGVRRKYFAMPPMGLEDARRQLDLIDHDFYLFREKESDQLQ 178 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 179 VIYRRNHGGY 188 [82][TOP] >UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BE19_PROM4 Length = 197 Score = 103 bits (257), Expect = 9e-21 Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR--CEVTLYTKRHG 396 L+ +++++ + K+ + I +V+E DV LS + P + EVT++ Sbjct: 12 LTPSLREYTQSKLEKAIHHFDGIVQEADVHLS------IAKNPSVPQQIAEVTVFANGT- 64 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RA+E ++ Y SIDLV++ + R+LRK KE+ +DH H G S + P Sbjct: 65 VIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH-HHSHG-----HSASLTPTTEAVV 118 Query: 215 EDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 ED+ I+ + + E L +R KYF MPP++ +A QL+++DHDFY F+ ET ++ Sbjct: 119 EDKAIDSSLIQGKEAHLPTPGIRRKYFSMPPMSTEQARHQLDLIDHDFYMFKEIETQQLQ 178 Query: 38 IVYKRKEGGY 9 ++Y+R GGY Sbjct: 179 VIYRRTHGGY 188 [83][TOP] >UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD Length = 196 Score = 102 bits (253), Expect = 3e-20 Identities = 64/187 (34%), Positives = 97/187 (51%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +S+A++ HV+ K+G ++ DV L P + EVT++ R+ VV Sbjct: 13 ISEALRAHVDQKIGDALKVFDITPMSCDVVLRVDKNPS---NPDRKTTEVTVFV-RNNVV 68 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R ++ Y +ID + + R+LRK K K + HMK SE + L ED + Sbjct: 69 RVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMK-------SERGIALTQEDLAN 121 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 IEI E+L +++VR KY D+ P+T EA+ Q +++ HDFY F N TG N++Y Sbjct: 122 LIEIPA-----EDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVFVNSSTGLTNVIY 176 Query: 29 KRKEGGY 9 RK GGY Sbjct: 177 HRKNGGY 183 [84][TOP] >UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IYK5_DEIGD Length = 186 Score = 101 bits (251), Expect = 5e-20 Identities = 64/187 (34%), Positives = 101/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ +VE+K+ R + + S + + V L+ R + GR R EV L +G++ Sbjct: 13 VTDAMRDYVEEKLTR-LDRFSDQITDARVVLTVRDVRDAGR---RNRVEVQLNVP-NGII 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEEH Y +ID S +++R+LRK K K H + P P P E D Sbjct: 68 RAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP----------PQPGLAEAD 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 D+ E E+VRTK FD+ P++ +A+ Q+E + HDFY F+N +TG +VY Sbjct: 118 ----VNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVFKNMDTGGCAVVY 173 Query: 29 KRKEGGY 9 +R++G Y Sbjct: 174 RRRDGHY 180 [85][TOP] >UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV Length = 188 Score = 99.0 bits (245), Expect = 2e-19 Identities = 63/187 (33%), Positives = 102/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +SDA++ +V++K+ R + +++ + + V L+ R + GR R EV L +G++ Sbjct: 13 VSDAMRDYVQEKLTR-LDRYNDQITDARVTLTVRDVRDAGR---RNRVEVQLNVP-NGII 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEEH Y +ID S +++R+LRK K R+MK + V P P E D Sbjct: 68 RAEEHHSDMYAAIDKASDVLERQLRKFKT------RYMKQ----RHETVPQPGPGPAEAD 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + DD E + E+VR K FDM P++ +A+ Q+E + HDFY F N + +VY Sbjct: 118 ---VNAGLDDVSEFMPEIVRQKRFDMRPMSPEDAVTQMEALGHDFYVFMNMGSNACGVVY 174 Query: 29 KRKEGGY 9 +R++G Y Sbjct: 175 RRRDGHY 181 [86][TOP] >UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Y1_9CLOT Length = 187 Score = 97.8 bits (242), Expect = 5e-19 Identities = 67/187 (35%), Positives = 102/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D +K VEDK+ + + ++ + EV V +S R + + EVT+ ++ Sbjct: 18 LTDGIKGAVEDKLSK-LDRYLHEDTEVKVTVSARKAKQ--------KIEVTIIPINGPII 68 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ E Y +ID+V + ++LR+ K K +KG + K E I ED Sbjct: 69 RAEDSEENLYAAIDVVYDKLNKQLRRYKNK-------LKGKYQSKGQESIRFQNIEDNAA 121 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E KD E +++ E R K FDM P++ EA+ Q+E+V HDFY FRN +T EI+IVY Sbjct: 122 E-----DKDGEFDIVIE--RHKKFDMKPMSPEEAVLQMELVGHDFYMFRNIDTDEISIVY 174 Query: 29 KRKEGGY 9 +R+ GGY Sbjct: 175 RRETGGY 181 [87][TOP] >UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN Length = 191 Score = 97.4 bits (241), Expect = 7e-19 Identities = 61/189 (32%), Positives = 108/189 (57%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396 ++DA++++ E+K+G ++ LV E+ + + PR CEVTL TK H Sbjct: 12 VTDALREYAEEKIGNSMKVMDIDPLVAEIVLFVEKNPAN-----PRPAVCEVTLRTKGH- 65 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 ++R EEH E Y +ID+ ++ + R+LRK K K D R ++ + E I PS Sbjct: 66 IIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVD--RKLRAAD-----ETIRIEPSAAG 118 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 E +++ Q+ ++E VVR K + PLT EA+ +++++ HDF+A+ + ++G +N+ Sbjct: 119 ELDVDGLMQELSDDE----VVRVKTIEFEPLTEEEALVKIDLLGHDFFAYTDRDSGLVNV 174 Query: 35 VYKRKEGGY 9 +Y+R +GGY Sbjct: 175 LYRRDDGGY 183 [88][TOP] >UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FVY1_9CLOT Length = 194 Score = 95.1 bits (235), Expect = 3e-18 Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+ +K ++E K+ ++ Y+ + DV+++ + GR + EVT+ K V+ Sbjct: 20 LTQGIKDNIESKLSKL---DKYISPDTDVKVTV--SAKKGR----HKIEVTIAPKNGHVI 70 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP--NRLKFSEVILPLPSEDE 216 RAEE E Y +IDLV ++ +L+K K+K + K + + ++ IL ED Sbjct: 71 RAEESQENLYPAIDLVVDKLKIQLKKYKDKMQKRHQENKSIRFDSPEINDSILEEDLEDF 130 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 EDE+ I + R K ++ P++ EA+ Q+E+V HDFY FRN+ET EI + Sbjct: 131 EDELFI-------------IKRRKRINIKPMSEEEAVLQMELVGHDFYIFRNDETDEIAL 177 Query: 35 VYKRKEGGY 9 VYKRK GGY Sbjct: 178 VYKRKNGGY 186 [89][TOP] >UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2X0_ABIDE Length = 175 Score = 94.7 bits (234), Expect = 4e-18 Identities = 59/187 (31%), Positives = 100/187 (53%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++D ++ +E+K+G++ Y + +V ++ + + ++ EVT+ K H ++ Sbjct: 12 VTDGLRNAIEEKLGKL---EHYFTPDTEVHVTLKVEKD------RQKVEVTVPVKGH-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ Y SIDL+ II+R+LR+ K K D + F+ + Sbjct: 62 RAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASN-----FTSAFM--------- 107 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 Q DD E+ +V+RTK F + P+ EA Q+E+++H FY FRN ET E+N+VY Sbjct: 108 ------QDDDYEDEDVKVIRTKRFAVKPMDPEEACVQMELLNHSFYVFRNAETDEVNVVY 161 Query: 29 KRKEGGY 9 KRK G Y Sbjct: 162 KRKNGDY 168 [90][TOP] >UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P2P9_9CLOT Length = 179 Score = 94.7 bits (234), Expect = 4e-18 Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396 +++ +K +E+K+GR+ YLV + V+V LS + G + + EVT+ K H Sbjct: 15 VTEGIKAAIEEKLGRL---DKYLVDDTIVNVTLSVQKGRQ--------KIEVTIPMKGH- 62 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 ++RAEE +E Y SIDLV +I+R++R+ K + + K+ ++ Sbjct: 63 IIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRLMNQ----------KYDGTSFKQEFMEQ 112 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 ED++E DDE +I R+K F + P+ V EA Q+E++ HDF+ FRN +T E+N+ Sbjct: 113 EDDVE-----DDEIRII----RSKKFAIKPMDVEEACVQMELLGHDFFVFRNADTFEVNV 163 Query: 35 VYKRKEGGY 9 VYKRK Y Sbjct: 164 VYKRKGNTY 172 [91][TOP] >UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile QCD-23m63 RepID=UPI00017F5F53 Length = 183 Score = 94.4 bits (233), Expect = 6e-18 Identities = 58/187 (31%), Positives = 105/187 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+DA+K +E K+ ++ +Y+ + DV+++ R R ++ EVT+ T ++ Sbjct: 12 LTDAIKNKIESKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIEVTIATVNGPII 62 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ E Y +ID+V + ++L+K K++ D + K ++F + + L E E+ Sbjct: 63 RAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDAEINLADEQED- 118 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+N ++ EI +VY Sbjct: 119 ------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVY 170 Query: 29 KRKEGGY 9 KR GGY Sbjct: 171 KRNNGGY 177 [92][TOP] >UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECY7_9ACTN Length = 194 Score = 94.4 bits (233), Expect = 6e-18 Identities = 62/187 (33%), Positives = 92/187 (49%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ HV++K+G ++ VDV L P EVT R V+ Sbjct: 12 VTDALRAHVDEKIGEALKVFDIEPMTVDVVLRYEKNPS---NPNPAIVEVTARA-RGSVI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R EH Y +IDL + + R+LRK K K D NR + P E ED Sbjct: 68 RVAEHGADMYAAIDLSADKVTRQLRKFKTKVVD--------NRQGGASAADVAPVERVED 119 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 ++ ++D++ L+ E K D+ P+T +A+ Q +++ HDFY F N TG IN+VY Sbjct: 120 LADLLLPEEDDDLLVRE----KVIDVTPMTEEQALVQTDLLGHDFYVFENATTGLINVVY 175 Query: 29 KRKEGGY 9 RK GGY Sbjct: 176 HRKNGGY 182 [93][TOP] >UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630 RepID=Q18CN1_CLOD6 Length = 183 Score = 94.0 bits (232), Expect = 7e-18 Identities = 58/187 (31%), Positives = 105/187 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+DA+K +E K+ ++ +Y+ + DV+++ R R ++ EVT+ T ++ Sbjct: 12 LTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIEVTIATVNGPII 62 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ E Y +ID+V + ++L+K K++ D + K ++F + + L E E+ Sbjct: 63 RAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDAEINLADEQED- 118 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+N ++ EI +VY Sbjct: 119 ------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVY 170 Query: 29 KRKEGGY 9 KR GGY Sbjct: 171 KRNNGGY 177 [94][TOP] >UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4X1_9FIRM Length = 181 Score = 94.0 bits (232), Expect = 7e-18 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++ +VE +VG+ I K+ V E+ V LS G + + EVT R ++ Sbjct: 13 VTPALRDYVEKRVGK-ITKYFDNVGEIAVLLSVEG--------KHHKVEVTAPVARGILL 63 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSEDEE 213 R EEH+E Y SIDLV ++R++RK K K R +G + + E P+P EDE Sbjct: 64 RGEEHSEDMYSSIDLVIEKLERQIRKQKTKLAR--RFRQGGFKAEAVETFAQPIPEEDE- 120 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 + VV+TK F + P+ V EAI Q+ +++H F+ FRN E+ E+NIV Sbjct: 121 ---------------LYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFRNAESEEVNIV 165 Query: 32 YKRKEGGY 9 Y R +G Y Sbjct: 166 YGRHDGKY 173 [95][TOP] >UniRef100_B9CNR8 Light-repressed protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CNR8_9ACTN Length = 195 Score = 93.6 bits (231), Expect = 9e-18 Identities = 61/187 (32%), Positives = 95/187 (50%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +SDA++ HVE+K+G ++ DV L + EVT++ R+ VV Sbjct: 13 VSDALRSHVEEKIGDALKVFDIQPMTCDVVLRVDKNPS---NLERKSVEVTVFV-RNSVV 68 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R + YG+ID + + R+LRK K + D H + S+ E+ + Sbjct: 69 RVVSSGDDMYGAIDEAAEKVTRQLRKYKTRIVDKHHHAQNTRGRALSQ-------EELAN 121 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 IE TP +D +++L+ E KY D+ P+T EA+ Q +++ HDFY F N TG N++Y Sbjct: 122 LIE-TPAEDLDDQLVRE----KYIDLLPMTEEEALVQTDLLGHDFYVFVNSTTGLTNVIY 176 Query: 29 KRKEGGY 9 RK GGY Sbjct: 177 HRKNGGY 183 [96][TOP] >UniRef100_B9I261 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I261_POPTR Length = 118 Score = 93.6 bits (231), Expect = 9e-18 Identities = 50/90 (55%), Positives = 62/90 (68%) Frame = -2 Query: 323 KLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTK 144 KLRKIK+KE+DHGRHMKG N+LK E P+ E E ++ +KDD+ ++E V TK Sbjct: 28 KLRKIKDKESDHGRHMKGFNKLKVRE---PMSQEVENVADTVSQRKDDDN--LDEAVHTK 82 Query: 143 YFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54 YFDMPPLTV EAI +L VDH FY F + E Sbjct: 83 YFDMPPLTVHEAIVRLGNVDHAFYGFGHAE 112 [97][TOP] >UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRE6_THAPS Length = 198 Score = 93.6 bits (231), Expect = 9e-18 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 4/190 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT--LYTKRHG 396 L+ A+ +V K+ + + K V DV L+ + P+ + + T + Sbjct: 16 LTPALSDYVNSKIEKTVGKLPLAVSHCDVYLTVN------KNPKVKDAHTAEVVTTLKGT 69 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSEVILPLPSE 222 R E + Y SIDLV++ + RKLRK KE+ D HG G N +EV+ + + Sbjct: 70 TFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGEN---IAEVLNAIEVD 126 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 + ED E D ++ ++ +V T P+++ EAI L+ +DHDFY FR+EET E+ Sbjct: 127 ESEDGAEEESYIDPDQAVVTKVKST------PISIKEAIFALDYIDHDFYVFRDEETNEV 180 Query: 41 NIVYKRKEGG 12 ++VYKR GG Sbjct: 181 SVVYKRNAGG 190 [98][TOP] >UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile ATCC 43255 RepID=UPI00017F5ACC Length = 185 Score = 93.2 bits (230), Expect = 1e-17 Identities = 62/187 (33%), Positives = 102/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D +K +V+ K+ R+ YL E +V+++ + ++ EVT+ ++ Sbjct: 12 LTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVEVTIIPINGQII 62 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ + Y +ID+V + R++ K K K D ++ K ++F L D Sbjct: 63 RAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN----LDFIDNSS 115 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E + ++DE +IE R K F++ P++ EAI Q+E+V H+FY FRN++ EINIVY Sbjct: 116 EFDDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVY 172 Query: 29 KRKEGGY 9 KRK GGY Sbjct: 173 KRKAGGY 179 [99][TOP] >UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile RepID=C9XIR4_CLODI Length = 183 Score = 93.2 bits (230), Expect = 1e-17 Identities = 58/187 (31%), Positives = 105/187 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+DA+K +E K+ ++ +Y+ + DV+++ R R ++ EVT+ T ++ Sbjct: 12 LTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIEVTIATVNGPII 62 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ E Y +ID+V + ++L+K K++ D + K ++F + + L E E+ Sbjct: 63 RAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDSEINLADEQED- 118 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+N ++ EI +VY Sbjct: 119 ------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVY 170 Query: 29 KRKEGGY 9 KR GGY Sbjct: 171 KRNNGGY 177 [100][TOP] >UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile RepID=C9XLM7_CLODI Length = 187 Score = 93.2 bits (230), Expect = 1e-17 Identities = 61/187 (32%), Positives = 104/187 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D +K +V+ K+ R+ YL E +V+++ + ++ EVT+ ++ Sbjct: 12 LTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVEVTIIPINGQII 62 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ + Y +ID+V + R++ K K K D ++ K ++F + + + E D Sbjct: 63 RAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENLDF-IDNSSEFD 118 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + + DDEE+ + R K F++ P++ EAI Q+E+V H+FY FRN++ EINIVY Sbjct: 119 DYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVY 174 Query: 29 KRKEGGY 9 KRK GGY Sbjct: 175 KRKAGGY 181 [101][TOP] >UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FCG3_9ACTN Length = 194 Score = 93.2 bits (230), Expect = 1e-17 Identities = 60/187 (32%), Positives = 95/187 (50%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ HV++K+G ++ DV L P EVT+ R V+ Sbjct: 12 VTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVEVTVRA-RGSVI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R EH Y +IDL + + R+LRK K + D+ + L +EV P E D Sbjct: 68 RVAEHGADMYAAIDLAAEKVTRQLRKFKTRVVDNRQQ-----GLSAAEVA---PVEPVAD 119 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 ++ +D++++L VR K ++ P+T EA+ Q +++ HDFY F N TG +N+VY Sbjct: 120 LADLLLPEDEDDQL----VRVKEVELTPMTDEEALVQTDLIGHDFYVFENSVTGLVNVVY 175 Query: 29 KRKEGGY 9 RK GGY Sbjct: 176 HRKNGGY 182 [102][TOP] >UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH Length = 178 Score = 92.8 bits (229), Expect = 2e-17 Identities = 62/187 (33%), Positives = 98/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++ +K + +K+G+ ++K+ E+ V LS + + EVT+ K + +V Sbjct: 12 VTEGLKSAIYEKIGK-LEKYFNPEAEIHVTLSVEKDRQ--------KIEVTIPMKGN-IV 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ + Y SIDLV +I+R+L+K K K D + N F +V L + +E+ Sbjct: 62 RAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFNPSFFEDV---LNEDSDEE 118 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 +I IT R K F M P+ EA Q+E++ H+FY FRN ET E+N+VY Sbjct: 119 DINIT--------------RVKRFAMKPMDAEEACVQMELLGHNFYVFRNAETDEVNVVY 164 Query: 29 KRKEGGY 9 KRK Y Sbjct: 165 KRKGNSY 171 [103][TOP] >UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NNI5_ROSCS Length = 198 Score = 92.8 bits (229), Expect = 2e-17 Identities = 59/187 (31%), Positives = 98/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 LSD +QH+E K+ R+ + YL R V + G R +VT+ +V Sbjct: 17 LSDRQRQHIEQKLSRLDR---YLDRIDKVTVEHMEEMRRNEG-NVHRVQVTVVGDHGVLV 72 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE A Y +ID V +QR++ + K+K GR R + +++ LP + Sbjct: 73 RAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGRL-----RRQGGQIVEALPEMNAA- 126 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 P DEEE +VRTK F + P+ EA++Q+E++ H F+ F++ +TG++N++Y Sbjct: 127 ----APAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQDADTGKLNVLY 182 Query: 29 KRKEGGY 9 +R++G Y Sbjct: 183 RRQDGNY 189 [104][TOP] >UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268 RepID=C2KX79_9FIRM Length = 176 Score = 92.4 bits (228), Expect = 2e-17 Identities = 64/187 (34%), Positives = 98/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D +K VE K+G+ + K +V LST+ ++ EVT+ K V+ Sbjct: 12 LTDGLKNGVEKKLGK-LDKFFQAETPCNVTLSTQKD--------MQKIEVTIPVKG-SVI 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE Y SIDLV +++R++RK K K RH S+ + Sbjct: 62 RAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQ--RHQAA--------------SDFSSE 105 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 IE P +D+EE ++VRTK+ D+ P+T EA Q+E++ H F+ F++ TG++N+VY Sbjct: 106 FIEEKPAQDEEEI---KIVRTKHIDLKPMTAEEACLQMELLGHSFFVFQDGNTGKVNVVY 162 Query: 29 KRKEGGY 9 KRK Y Sbjct: 163 KRKANSY 169 [105][TOP] >UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8G1_9ACTN Length = 194 Score = 92.4 bits (228), Expect = 2e-17 Identities = 60/187 (32%), Positives = 95/187 (50%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ HV++K+G ++ DV L P EVT+ R V+ Sbjct: 12 VTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVEVTVRA-RGSVI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R EH Y +IDL + + R+LRK K + D+ + L +EV P D D Sbjct: 68 RVAEHGADMYAAIDLAADKVTRQLRKFKTRVVDNRQQ-----GLSAAEVAPVEPVADLAD 122 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + P+++D++ +VR K ++ P+T +A+ Q +++ HDFY F N TG IN+VY Sbjct: 123 LL--IPEEEDDQ-----LVRVKEIELTPMTEEQALVQTDLLGHDFYVFENSTTGLINVVY 175 Query: 29 KRKEGGY 9 RK GGY Sbjct: 176 HRKNGGY 182 [106][TOP] >UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile QCD-23m63 RepID=UPI00017F60C6 Length = 185 Score = 91.7 bits (226), Expect = 4e-17 Identities = 62/187 (33%), Positives = 101/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D +K +V+ K+ R+ YL E +V+++ + ++ EVT+ ++ Sbjct: 12 LTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVEVTIIPINGQII 62 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ + Y +ID+V + R++ K K K D ++ K ++F V S + +D Sbjct: 63 RAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENVDFIDNSSEFDD 119 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 DDEE + R K F++ P++ EAI Q+E+V H+FY FRN++ EINIVY Sbjct: 120 Y-------DDEEYENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVY 172 Query: 29 KRKEGGY 9 KRK GGY Sbjct: 173 KRKAGGY 179 [107][TOP] >UniRef100_Q7XYJ6 Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XYJ6_BIGNA Length = 170 Score = 91.7 bits (226), Expect = 4e-17 Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = -2 Query: 431 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 252 + EVT+Y K V+R + + Y SIDLV+ ++ RKLRK KE++ G+ R + Sbjct: 15 KIEVTVYVKDSKVIRGSVSSVSEYSSIDLVTDLVNRKLRKYKERK--EGKRTASGVRTFY 72 Query: 251 SEVILPLPSEDEEDEIEITPQKDD--EEEL---------IEEV--VRTKYFDMPPLTVFE 111 + I S+ + E +DD +EE +E+V VR K F MPP+++ + Sbjct: 73 TNDI----SDSSDVEGAAVQGQDDVQQEEYSGIPEGYAPVEDVSVVRRKKFPMPPISIED 128 Query: 110 AIDQLEMVDHDFYAFRNEETGEINIVYKRKEGG 12 A L+ +DHDFY FRN ET EIN+VY+R EGG Sbjct: 129 ATLCLDYLDHDFYVFRNSETKEINVVYRRAEGG 161 [108][TOP] >UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA Length = 191 Score = 91.7 bits (226), Expect = 4e-17 Identities = 59/187 (31%), Positives = 104/187 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++ ++++VE+K+ R + +++ + + V L+ R + R R EV L G++ Sbjct: 13 VTEPMREYVEEKLSR-LDRYTDQITDARVTLTVR---DVRNNERRNRVEVQLNVPG-GII 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEEH Y +ID S +++R+LRK K R+MK R + LP P+E E + Sbjct: 68 RAEEHHADMYAAIDKASDVLERQLRKFKT------RYMK--QRQEGRPEPLPGPAEAEVN 119 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 DD E E+VR K F++ P++ +A+ Q+E + HDFY F++ + G+ +VY Sbjct: 120 AQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQDLQ-GQTGVVY 178 Query: 29 KRKEGGY 9 +R++G Y Sbjct: 179 RRRDGHY 185 [109][TOP] >UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus RepID=Q5KV92_GEOKA Length = 183 Score = 91.3 bits (225), Expect = 5e-17 Identities = 63/187 (33%), Positives = 110/187 (58%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++++VE K+G+ ++++ +V V ++ + + G+G + EVT+ H ++ Sbjct: 12 VTPALREYVEKKIGK-LERYFDGTEDVHVHVNLKVYND-GQG----KIEVTI-PMPHLLL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE E Y +IDLV+ ++R++RK K K + K +R K +++ P+PS Sbjct: 65 RAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAKLAAPVPSGASAA 119 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E ++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET NIVY Sbjct: 120 E-------NNEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 170 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 171 RRKDGKY 177 [110][TOP] >UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus JCSC1435 RepID=Y2139_STAHJ Length = 192 Score = 91.3 bits (225), Expect = 5e-17 Identities = 61/188 (32%), Positives = 103/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ ++EDK+G++ + + + V V++ T T + EVT+ K + Sbjct: 13 ITDAIRNYIEDKIGKLERYFNDVPNAVAHVKVKTYQNS-------TTKIEVTIPLK-NVT 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y IDLV+S ++R++RK K + + +H F + P E+ + Sbjct: 65 LRAEERHDDLYAGIDLVTSKLERQVRKYKTRV--NRKHKTHGEPEAFVAEVQEAPPENVD 122 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 D + P D E E+I R+K F + P+ EA+ Q+E++ HDFY F + ET +IV Sbjct: 123 D-VNAEPTNDSEIEII----RSKQFSLKPMDSEEAVLQMELLGHDFYIFTDRETDGTSIV 177 Query: 32 YKRKEGGY 9 YKRK+G Y Sbjct: 178 YKRKDGKY 185 [111][TOP] >UniRef100_C7ML59 Ribosomal subunit interface protein n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7ML59_CRYCD Length = 188 Score = 89.7 bits (221), Expect = 1e-16 Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRG-PRTRRCEVTLYTKRH 399 ++DA+K + E+K+G ++ L+ EV + + E R R CEVT+ K H Sbjct: 12 VTDALKSYAEEKIGNSMKVMDIDPLIAEVILHV------EQNRAIARPAICEVTMTAKGH 65 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 ++R EEH E Y +ID+ ++ + R+LRK K + + + L L + Sbjct: 66 -IIRVEEHEEDMYAAIDVAAAKVLRQLRKFKTRVVERNTRTDAASIRSAKSAKLDLDALM 124 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 EE DDE VVR K D+ PLT EA+ +++++ HDF+A+ + +T E Sbjct: 125 EE-------LSDDE------VVREKSIDLQPLTEEEALVEIDLLGHDFFAYTDRDTNEFR 171 Query: 38 IVYKRKEGGY 9 I+Y+R+ GGY Sbjct: 172 ILYRRRNGGY 181 [112][TOP] >UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NJJ3_EUBSP Length = 179 Score = 89.7 bits (221), Expect = 1e-16 Identities = 58/187 (31%), Positives = 102/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ +K+ VE+K+G+ ++++ E+ V LS + ++ EVT+ K G++ Sbjct: 12 VTPGLKEAVENKLGK-LERYFTPDTEIHVTLSVQR--------ERQKIEVTIPVKG-GII 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+LRK K K RH +G K ++ Sbjct: 62 RSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK-------------QE 106 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + + +D+ E+ ++VRTK F P+ +A Q+E++ HDF+ F N ET E+N+VY Sbjct: 107 FFDSGERSEDDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFFVFCNAETDEVNVVY 164 Query: 29 KRKEGGY 9 +RK G + Sbjct: 165 RRKNGTF 171 [113][TOP] >UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD Length = 197 Score = 89.4 bits (220), Expect = 2e-16 Identities = 54/191 (28%), Positives = 103/191 (53%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKV---GRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRH 399 +S+ ++H+E+K+ GR + + + EV G + R + TL + Sbjct: 12 ISERQREHIEEKLAKLGRYLNGITSITVEVQHEQQRNVGEVY-------RVQTTLVAEHG 64 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSE 222 ++RAEE A Y +ID V ++QR++++ K+K R ++ N L +E + +E Sbjct: 65 VILRAEERAADLYAAIDAVQEVLQRQIQRYKDKYWRRSRELRRATNGLTPAEEVAIAEAE 124 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 E + E E + +V+RTK F + P+ V +AI+Q+E++ H F+ F++ ET +I Sbjct: 125 TEAMTAPV------ETEPVAKVIRTKTFRLRPMFVDDAIEQMELLGHTFFVFQDAETMQI 178 Query: 41 NIVYKRKEGGY 9 +++Y+R++G Y Sbjct: 179 SVLYRRRDGNY 189 [114][TOP] >UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G387_9FIRM Length = 177 Score = 89.0 bits (219), Expect = 2e-16 Identities = 59/187 (31%), Positives = 102/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ +K VE K+G+ +Q++ E+ V LS + ++ EVT+ K + ++ Sbjct: 12 VTPGLKDAVESKLGK-LQRYFTPDTEIHVTLSVQ--------KEHQKIEVTIPVKGN-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ ++ Y SIDLV +I+R+LRK K K ++ +G N FS+ + E+D Sbjct: 62 RSEQESDDMYVSIDLVEEVIERQLRKYKNKLV--AKNQEGNN---FSKTLFETEESIEDD 116 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E++I VRTK F + P+ +A Q+E++ H+F+ F N E E+N+VY Sbjct: 117 EVKI--------------VRTKRFGIKPMYPEDACVQMELLGHNFFVFFNAENEEVNVVY 162 Query: 29 KRKEGGY 9 KRK+G + Sbjct: 163 KRKDGSF 169 [115][TOP] >UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NDQ1_9LACT Length = 186 Score = 88.6 bits (218), Expect = 3e-16 Identities = 60/187 (32%), Positives = 104/187 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++Q+ E K+ + ++K+ V ++ + E +T + EVT+ + V+ Sbjct: 19 VTEAIRQYAEKKISK-LEKYFTDVANATAYVNLKVYTE-----KTAKVEVTIPLP-YLVL 71 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE + YGSIDLV ++R++RK K K + +R K +++LP Sbjct: 72 RAEETSIDLYGSIDLVVDKLERQVRKHKTK-------INRKSREKGFDIVLPT------- 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 P+ +EEE E+VRTK D+ P+ EA+ Q+ M+ H+F+ +++ ET E NIVY Sbjct: 118 ----LPEAPEEEETGLEIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIYQDAETNETNIVY 173 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 174 RRKDGKY 180 [116][TOP] >UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis SK119 RepID=C2LVK8_STAHO Length = 191 Score = 88.6 bits (218), Expect = 3e-16 Identities = 56/191 (29%), Positives = 104/191 (54%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ ++E+K+G++ + + + V V++ T + EVT+ K + Sbjct: 13 ITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYQNS-------ATKIEVTIPLK-NVT 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE- 216 +RAEE + Y IDLV+S ++R++RK K + R P P +E + Sbjct: 65 LRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEPE---------PFIAEQQT 115 Query: 215 --EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 +++E T + +E E+ E++R+K F + P+ EA+ Q++++ HDFY F + ET Sbjct: 116 VVNEDVEATSESSNENEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDFYIFTDRETDGT 173 Query: 41 NIVYKRKEGGY 9 +IVY+RK+G Y Sbjct: 174 SIVYRRKDGKY 184 [117][TOP] >UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BHR0_9FIRM Length = 178 Score = 88.6 bits (218), Expect = 3e-16 Identities = 64/187 (34%), Positives = 102/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ +++ VE K+G+ + ++ E+ V LS + G + + EVT+ K G+V Sbjct: 12 VTPGLREAVESKLGK-LGRYFTPNTEIHVTLSVQKGHQ--------KIEVTIPVKG-GLV 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+LRK K K R +G N F + D ED Sbjct: 62 RSEQESSDMYVSIDLVEEVIERQLRKYKNKLV--AREQEGGN---FKQEFF-----DAED 111 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 IE D+ E+ ++VRTK F P+ +A Q+E++ HDFY F N E+ E+N+VY Sbjct: 112 NIE------DDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFYVFCNAESDEVNVVY 163 Query: 29 KRKEGGY 9 +RK G + Sbjct: 164 RRKNGTF 170 [118][TOP] >UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus RepID=A9W9Y4_CHLAA Length = 197 Score = 88.2 bits (217), Expect = 4e-16 Identities = 54/191 (28%), Positives = 104/191 (54%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS---TRGGGEFGRGPRTRRCEVTLYTKRH 399 +SD + H+E+K+ + ++++ + + + V + R GE R + TL + Sbjct: 12 ISDRQRAHIEEKLSK-LERYLHGITSITVEVQHEQQRNAGE------VYRVQTTLVAEHG 64 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSE 222 ++RAEE A Y +ID V ++QR++ + K+K R + PN L +E + Sbjct: 65 VILRAEERAPDLYAAIDEVQEVLQRQIARYKDKYWRRSREQRRAPNGLTPAEEVA---IA 121 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 + E TP + E V+RTK F + P+ V +AI+Q+E++ H+F+ F++ ET ++ Sbjct: 122 EAEAAALATPTEVGSEA---RVIRTKTFRLRPMFVDDAIEQMELLGHNFFVFQDAETMQV 178 Query: 41 NIVYKRKEGGY 9 +++Y+R++G Y Sbjct: 179 SVLYRRRDGNY 189 [119][TOP] >UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S366_9CLOT Length = 187 Score = 88.2 bits (217), Expect = 4e-16 Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++ +K VE K+G++ +H + EV V LS + + + EVT+ K + Sbjct: 23 VTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KIEVTIPVKGN-T 71 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y SIDLV II+R++R+ ++K D K + FS+ + +EE Sbjct: 72 IRAEESSTDMYVSIDLVEEIIERQIRRYRKKLID-----KKQAAISFSQAFI-----EEE 121 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 DE++ DDE + +V+TK F + P EA Q+EM+ H+FY F N +T ++N+V Sbjct: 122 DEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNADTDQVNVV 172 Query: 32 YKRKEGGY 9 YKRK G Y Sbjct: 173 YKRKNGTY 180 [120][TOP] >UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVD1_9CLOT Length = 176 Score = 87.8 bits (216), Expect = 5e-16 Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++ +K VE K+G++ +H + EV V LS + + + EVT+ K + Sbjct: 12 VTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KIEVTIPVKGN-T 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y SIDLV +I+R++R+ ++K D K L FS+ + +++E Sbjct: 61 IRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAALSFSQAFIDEEEDEQE 115 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 D+I I V+TK F + P EA Q+EM+ H+FY F N +T ++N+V Sbjct: 116 DDIRI--------------VKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNSDTDQVNVV 161 Query: 32 YKRKEGGY 9 YKRK G Y Sbjct: 162 YKRKNGTY 169 [121][TOP] >UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BAM2_9FIRM Length = 189 Score = 87.8 bits (216), Expect = 5e-16 Identities = 64/187 (34%), Positives = 97/187 (51%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ ++Q VE K+G++ Y E D+ ++ E ++ EVT+ K + ++ Sbjct: 23 ITPGLRQAVEQKLGKL---EKYFTPETDIIVTLSVEKE------RQKIEVTIPVKGN-II 72 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV II+R+LRK K K +G + + E I S E D Sbjct: 73 RSEQESSDMYVSIDLVEEIIERQLRKYKTKLI---AKQQGGHDFR-QEFIESDTSAAESD 128 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 EIEI VRTK F + P+ +A Q+E++ H+FY F N ET E+N+VY Sbjct: 129 EIEI--------------VRTKRFGIKPMFPEDACIQMELLGHNFYVFSNAETDEVNVVY 174 Query: 29 KRKEGGY 9 KRK G Y Sbjct: 175 KRKNGTY 181 [122][TOP] >UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB Length = 190 Score = 87.4 bits (215), Expect = 7e-16 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 3/189 (1%) Frame = -2 Query: 566 SDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396 +DA+ +++ +K+ I + + + ++VR +T + EVT+ + Sbjct: 14 TDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEVTIPLP-YL 63 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 +RAEE Y ++DLVS+ + R++RK K + R +G + F+E I P+PS+ Sbjct: 64 TLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAIDPVPSDTN 122 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 ED+ K D V+R K + P+ + EA+ Q+EM+DHDF+ F N +T +++I Sbjct: 123 EDK------KID-------VIRRKNLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQLDI 169 Query: 35 VYKRKEGGY 9 VYKR +G Y Sbjct: 170 VYKRDDGKY 178 [123][TOP] >UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN Length = 179 Score = 87.4 bits (215), Expect = 7e-16 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + I+++ EV V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-IERYFDTFPEVKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV I+R++RK K K R KG + F LP + + Sbjct: 61 LRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSAKTAFI-----LPDQLGQ 114 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 +E++ E+EL E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E NIV Sbjct: 115 EEVQ-------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNIV 165 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 166 YGRKDGKY 173 [124][TOP] >UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1 Length = 193 Score = 87.4 bits (215), Expect = 7e-16 Identities = 58/188 (30%), Positives = 101/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +S+ +QH+E K+ R+ + YL R V + G R +VT+ +V Sbjct: 12 ISERQRQHIEQKLSRLDR---YLDRIAQVTVEHMEEMRRNEG-NVHRVQVTVVGDHGVLV 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE A Y +ID V +QR++ + K+K H R +G R + +++ LP Sbjct: 68 RAERRAPELYAAIDEVYDTLQRQIERYKDK---HWR--RGKLRRQGGQIVEALP------ 116 Query: 209 EIEITPQKD-DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E+ D EEE +VRTK F + P+ EA++Q+E++ H+F+ F++ +TG++N++ Sbjct: 117 ELAAPSLADTQEEEERPRIVRTKEFQVKPMYSDEAVEQMELLGHNFFIFQDADTGKLNVL 176 Query: 32 YKRKEGGY 9 Y+R++G Y Sbjct: 177 YRRQDGNY 184 [125][TOP] >UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVT1_9FIRM Length = 187 Score = 87.4 bits (215), Expect = 7e-16 Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++ +K VE K+G++ +H + EV V LS + + + EVT+ K + Sbjct: 23 VTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KIEVTIPVKGN-T 71 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y SIDLV +I+R++R+ ++K D K + FS+ + +EE Sbjct: 72 IRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAAISFSQAFI-----EEE 121 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 DE++ DDE + +V+TK F + P EA Q+EM+ H FY F N +T ++N+V Sbjct: 122 DEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHSFYVFLNADTDQVNVV 172 Query: 32 YKRKEGGY 9 YKRK G Y Sbjct: 173 YKRKNGTY 180 [126][TOP] >UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC BAA-1163 RepID=A0NI00_OENOE Length = 190 Score = 87.4 bits (215), Expect = 7e-16 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 3/189 (1%) Frame = -2 Query: 566 SDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396 +DA+ +++ +K+ I + + + ++VR +T + EVT+ + Sbjct: 14 TDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEVTIPLP-YL 63 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 +RAEE Y ++DLVS+ + R++RK K + R +G + F+E I P+PS+ Sbjct: 64 TLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAIDPVPSDTN 122 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 ED+ K D V+R K + P+ + EA+ Q+EM+DHDF+ F N +T +++I Sbjct: 123 EDK------KID-------VIRRKTLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQLDI 169 Query: 35 VYKRKEGGY 9 VYKR +G Y Sbjct: 170 VYKRDDGKY 178 [127][TOP] >UniRef100_B9I248 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I248_POPTR Length = 115 Score = 87.4 bits (215), Expect = 7e-16 Identities = 52/105 (49%), Positives = 63/105 (60%), Gaps = 14/105 (13%) Frame = -2 Query: 326 RKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI---- 165 RKLRKIK+KE+DHGRHMKG N+LK E P+ E D ++ +KDD+ +EL Sbjct: 8 RKLRKIKDKESDHGRHMKGFNKLKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHL 64 Query: 164 --------EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54 V TKYFDMPPLTV EAI +L VDH FY F + E Sbjct: 65 VTIHSIISSNAVHTKYFDMPPLTVDEAIVRLGNVDHAFYGFGHAE 109 [128][TOP] >UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD Length = 189 Score = 87.0 bits (214), Expect = 9e-16 Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 3/142 (2%) Frame = -2 Query: 425 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKF 252 E TL+ V++A E +E Y SID +S ++R++++ + ++ D HGR LK Sbjct: 59 ETTLFING-AVLKAREASEDMYASIDRMSDKLERQVKRYRGRQVDRWHGR-------LK- 109 Query: 251 SEVILPLPSEDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDF 75 E E P +EEE IE +VRTK F M P++ EA+ Q+E++DHDF Sbjct: 110 ---------NHEGARAEPQPFVAEEEEDIEPRIVRTKQFQMKPMSAEEAVLQMELLDHDF 160 Query: 74 YAFRNEETGEINIVYKRKEGGY 9 + F N +TG+IN+VY+R++G Y Sbjct: 161 FVFTNADTGDINVVYRRRDGNY 182 [129][TOP] >UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE Length = 180 Score = 87.0 bits (214), Expect = 9e-16 Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+G+ ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLGK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV I+R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [130][TOP] >UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1P8_9CLOT Length = 190 Score = 87.0 bits (214), Expect = 9e-16 Identities = 57/187 (30%), Positives = 99/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D +K + EDK+ ++ YL + +V+++ G ++ EV + + Sbjct: 20 LTDGIKGYTEDKLKKL---GKYLDEDTEVKVTVSAG------KNRQKVEVMIPNVNGHTI 70 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R EE + Y +IDLV + R++ K K+K + G +++ + EE Sbjct: 71 RVEEEQDNLYPAIDLVCDKLSRQIIKYKDK---FKTRVPGNFSIRYEGI--------EEL 119 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E+ + ++ E +IE R K F++ P+++ EAI Q+ + DHDFY F++ E+ EI +VY Sbjct: 120 AQELDYEVEEPEVVIE---RRKKFNLKPMSIEEAILQMNLTDHDFYMFKDRESFEICLVY 176 Query: 29 KRKEGGY 9 KRKEGGY Sbjct: 177 KRKEGGY 183 [131][TOP] >UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CQE4_9BACI Length = 189 Score = 87.0 bits (214), Expect = 9e-16 Identities = 59/187 (31%), Positives = 98/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++ HVE+K+G+ + ++ + DV ++ + + + + EVT+ H V+ Sbjct: 13 VTPAIRDHVENKIGK-LNRYFNETPDADVHVNLKVYPD-----KKTKVEVTI-PMPHLVL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE E Y +IDL+ ++R++RK K K R P ++ L +E Sbjct: 66 RAEERHEDMYAAIDLIVDKLERQIRKHKTKVNRKMREKGSPKEFFAAQEGLTTSQLNE-- 123 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 K E E +EVVRTK F++ P+ EAI Q+ ++ H F+ F + ET NIVY Sbjct: 124 -------KARETEENDEVVRTKQFNLKPMDSEEAILQMNLLGHSFFIFTDAETNATNIVY 176 Query: 29 KRKEGGY 9 KR++G Y Sbjct: 177 KRRDGKY 183 [132][TOP] >UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KKP2_9FIRM Length = 198 Score = 87.0 bits (214), Expect = 9e-16 Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ +K+ +E K+G+ ++++ E+ V LS G + + EVT+ K ++ Sbjct: 25 VTPGLKEAIEQKLGK-LERYFTPETEIIVTLSVEKGRQ--------KIEVTIPVKG-SII 74 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+LRK K K + +PS + Sbjct: 75 RSEQTSSDMYVSIDLVEEVIERQLRKYKNKLVAKSQ----------GHPTAAVPSGSIKK 124 Query: 209 E-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E IE + D++E+ +VRTK F + P+ +A Q+E++ H F+ F N ET E+N+V Sbjct: 125 EFIESDDESSDDDEI--RIVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAETDEVNVV 182 Query: 32 YKRKEGGY 9 YKRK+G + Sbjct: 183 YKRKDGSF 190 [133][TOP] >UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLV8_ANATD Length = 181 Score = 86.7 bits (213), Expect = 1e-15 Identities = 60/189 (31%), Positives = 104/189 (55%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA+K+ +E K+ + ++++ L +V V LS EVT+ HG++ Sbjct: 12 VTDALKERIEKKLSK-LERYIKLNTDVHVTLSVEKISHI--------VEVTI--PFHGMI 60 Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 RAEE + Y +IDLV ++R++RK K K R K +E + + E EE Sbjct: 61 LRAEERSNDMYSAIDLVVDTLERQIRKFKTKIA---------KRAKDAESLRYMTFELEE 111 Query: 212 DEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 P+K+ +EE E + +TK F + P++V EAI Q+ ++ H+F+ F N++T ++N+ Sbjct: 112 ------PEKEVQEENSEFRIAKTKRFPIKPMSVEEAILQMNLLGHNFFVFLNQDTDKVNV 165 Query: 35 VYKRKEGGY 9 VY+R +G Y Sbjct: 166 VYRRNDGAY 174 [134][TOP] >UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GL70_ANOFW Length = 182 Score = 86.7 bits (213), Expect = 1e-15 Identities = 60/187 (32%), Positives = 98/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++++VE K+G+ ++++ V V ++ + + + + EVT+ + V+ Sbjct: 12 VTQAIREYVEKKIGK-LERYFESTEGVTVHVNLKVYND-----KQAKIEVTIPMPQI-VL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE + Y +IDLV ++R++RK K K R K N + + + E EE+ Sbjct: 65 RAEERHDDMYAAIDLVVDKLERQIRKHKTKVNRKMRE-KEANGVTLTATVPVATEEHEEE 123 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E E VVRTK F + P+ EAI Q+ M+ H+FY F N ET N+VY Sbjct: 124 EFE--------------VVRTKRFSLKPMDSEEAILQMNMLGHNFYVFINAETNRTNVVY 169 Query: 29 KRKEGGY 9 KRK+G Y Sbjct: 170 KRKDGKY 176 [135][TOP] >UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BMS6_9LACT Length = 182 Score = 86.7 bits (213), Expect = 1e-15 Identities = 60/187 (32%), Positives = 103/187 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ + E K+ + ++K+ V V ++ + E +T + EVT+ + V+ Sbjct: 13 VTEAIRNYAEKKLSK-LEKYFGDVANATVHVNLKVYTE-----KTAKVEVTIPLP-YLVL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE + YGSIDLV ++R++RK K K R KG F + P Sbjct: 66 RAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KG-----FDIPVAP-------- 111 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + P+ DE+E + E+VRTK D+ P+ EA+ Q+ M+ H+F+ +++ ET E +IVY Sbjct: 112 ---VVPEPVDEDESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIYQDAETNETHIVY 168 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 169 RRKDGKY 175 [136][TOP] >UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U6N5_9LACT Length = 180 Score = 86.7 bits (213), Expect = 1e-15 Identities = 61/186 (32%), Positives = 103/186 (55%), Gaps = 2/186 (1%) Frame = -2 Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381 A++ +VE KVG+V +K+ V E ++ + + +T + EVT+ + V+RAE Sbjct: 16 AIRSYVEKKVGKV-EKYFNDVPEATAHVNLKTYSD-----KTAKVEVTIPLP-YLVLRAE 68 Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP--LPSEDEEDE 207 E + YGS+DLVS ++R++RK K K R + S V++P LP E++E Sbjct: 69 ETSPDLYGSVDLVSDKLERQMRKYKTKIN---------RRTRGSNVVVPPVLPGEEQESH 119 Query: 206 IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYK 27 E+E+ +VRTK + P+ EA+ Q++M+ H+F+ F + +T +IVY+ Sbjct: 120 ---------EDEV--NIVRTKRLSLKPMDSEEAVLQMDMLGHNFFIFEDADTNGTSIVYR 168 Query: 26 RKEGGY 9 RK+G Y Sbjct: 169 RKDGKY 174 [137][TOP] >UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDF7_BACSK Length = 184 Score = 85.9 bits (211), Expect = 2e-15 Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++ A+++++E KVG++ + +V+V+L G GE EVT+ + + Sbjct: 12 VTPAIREYIEKKVGKLERYFDTTPTADVNVKLQVLGSGESS-------IEVTIPMPKL-L 63 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +R EE Y +ID+V ++R++RK K K R +G + F + PL E E Sbjct: 64 LRGEEINADMYAAIDIVVEKLERQIRKYKTKVNRKFRQ-EGSLKYMFKNELEPLRDEVAE 122 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 D+ EL EVVRTK F++ P+ EAI Q++++ H+F+ F + E+G N+V Sbjct: 123 DD-----------EL--EVVRTKRFNLKPMDAEEAILQMDLLGHNFFVFSDAESGSTNVV 169 Query: 32 YKRKEGGY 9 Y+RK+G Y Sbjct: 170 YRRKDGKY 177 [138][TOP] >UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z528_9FIRM Length = 179 Score = 85.9 bits (211), Expect = 2e-15 Identities = 59/187 (31%), Positives = 99/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++ ++ VE+K+G+ + K+ VDV LS ++ EVT+ K ++ Sbjct: 12 VTEGIRSAVEEKIGK-LDKYFAEETRVDVTLSVN--------KNEQKVEVTIPVKGR-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE ++ Y SID+V I+R+L K K K D + +K F+E + EDE Sbjct: 62 RAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIKEA----FTETYIEADYEDE-- 115 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 DE+++ ++ +TK F + P+ EA ++E++ H+F+ F N ET E+N+VY Sbjct: 116 ---------DEDQI--KIKKTKRFGIKPMDPEEACVEMELLGHNFFVFLNAETEEVNVVY 164 Query: 29 KRKEGGY 9 KRK Y Sbjct: 165 KRKGNTY 171 [139][TOP] >UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 RepID=Y1964_STAS1 Length = 190 Score = 85.9 bits (211), Expect = 2e-15 Identities = 56/188 (29%), Positives = 101/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ ++E+K+G++ + + + V++ T + EVT+ K+ Sbjct: 13 ITDAIRNYIEEKIGKLERYFNDVPNATAHVKVKTYQNS-------ATKIEVTIPLKKV-T 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y IDL+++ ++R++RK K + R+ +G E LP E E Sbjct: 65 LRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN-RGEQ-----EAFASLPEEKEA 118 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 EI+ + D E E++R K F + P+ EA+ Q++++ HDF+ F + ET +IV Sbjct: 119 VEIQNDENEADNEI---EIIRAKNFSLKPMDSEEAVLQMDLLGHDFFIFTDRETDGTSIV 175 Query: 32 YKRKEGGY 9 YKRK+G Y Sbjct: 176 YKRKDGKY 183 [140][TOP] >UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens RepID=Q8XIE9_CLOPE Length = 179 Score = 85.5 bits (210), Expect = 3e-15 Identities = 46/129 (35%), Positives = 76/129 (58%) Frame = -2 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 ++R EE + Y SIDLV I+R++RK K + + R+ + L+F+ Sbjct: 60 LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH---------- 105 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F++ ET ++N+ Sbjct: 106 -----IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV 160 Query: 35 VYKRKEGGY 9 VYKRK+G Y Sbjct: 161 VYKRKDGNY 169 [141][TOP] >UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens SM101 RepID=Q0SR10_CLOPS Length = 179 Score = 85.5 bits (210), Expect = 3e-15 Identities = 46/129 (35%), Positives = 76/129 (58%) Frame = -2 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 ++R EE + Y SIDLV I+R++RK K + + R+ + L+F+ Sbjct: 60 LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH---------- 105 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F++ ET ++N+ Sbjct: 106 -----IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV 160 Query: 35 VYKRKEGGY 9 VYKRK+G Y Sbjct: 161 VYKRKDGNY 169 [142][TOP] >UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZI34_EUBR3 Length = 175 Score = 85.5 bits (210), Expect = 3e-15 Identities = 63/187 (33%), Positives = 99/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L++ +KQ VE+K+ + ++K +V V LS + + EVT+ K H V+ Sbjct: 12 LTEGLKQAVEEKLSK-LEKFFKPDTDVYVTLSVEKDRQ--------KIEVTIPAKGH-VI 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+LRK + K + K++ I ++D Sbjct: 62 RSEQVSNDMYVSIDLVEEVIERQLRKYRTKISAK----------KYAPAIF------QDD 105 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 +E DD E+ ++VRTK F M P+ +A Q+E+ HDF+ FRN E E+N+VY Sbjct: 106 FVEA----DDAEDEEIKIVRTKRFGMKPMYPEDACIQMELSGHDFFVFRNAENDEVNVVY 161 Query: 29 KRKEGGY 9 KRK Y Sbjct: 162 KRKGHTY 168 [143][TOP] >UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z2Z4_EUBE2 Length = 175 Score = 85.5 bits (210), Expect = 3e-15 Identities = 59/187 (31%), Positives = 97/187 (51%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++ +K VE+K+G+ + + EV+V LS ++ EVT+ K + ++ Sbjct: 12 ITEGLKSAVEEKLGK-LDRFFAPETEVNVTLSVE--------KERQKIEVTIPVKGN-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+L+K K K D K N F++ + +D+E Sbjct: 62 RSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD-----KQQNAAAFAQEFVEKDYDDDEV 116 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 +I +RTK F + P+ EA Q+E++ H+FY F N ET E+N+VY Sbjct: 117 KI----------------IRTKRFGIKPMDPEEACVQMELLGHNFYVFFNSETEEVNVVY 160 Query: 29 KRKEGGY 9 KRK Y Sbjct: 161 KRKGNTY 167 [144][TOP] >UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6T8_BREBN Length = 185 Score = 85.5 bits (210), Expect = 3e-15 Identities = 55/184 (29%), Positives = 100/184 (54%) Frame = -2 Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381 A++++VE KVGR ++K+ + +V+++ RG T + L ++RAE Sbjct: 15 ALREYVEKKVGR-LEKYFETPQPTEVQVTMH----VHRGEGTIEVTIPLSGV---IIRAE 66 Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIE 201 E E Y +IDLV ++R++RK K K R + R+ ++ E + Sbjct: 67 ETHEDMYAAIDLVVEKLERQIRKHKTKLMRKLR-VDSTGRI----------AQRESQPVA 115 Query: 200 ITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRK 21 + DEE++ ++VRTK FD+ P+ EA+ Q++M+ H F+ F+N +T ++++VY+R Sbjct: 116 VMIPDVDEEDIDIDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVFQNSDTNDVSVVYRRN 175 Query: 20 EGGY 9 +G Y Sbjct: 176 DGRY 179 [145][TOP] >UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B1U0_9BACI Length = 184 Score = 85.5 bits (210), Expect = 3e-15 Identities = 60/187 (32%), Positives = 100/187 (53%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++++VE K+ + ++K+ + +V ++ + + EVT+ ++ V+ Sbjct: 12 VTPAIREYVEKKIAK-LEKYFTETPDANVHVNLKTYNN-----NRSKVEVTI-PMQNLVL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE E Y +IDL+ ++R++RK K K R KG L F+ D Sbjct: 65 RAEEDHEDMYAAIDLIVDKLERQIRKHKTKVNRKFRE-KGSPTLMFASF----------D 113 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E E ++++ +L EVVR K FD+ P+ EAI Q+ ++ H FY F N ET N+VY Sbjct: 114 EPEAPVLEEEDNDL--EVVRQKSFDLKPMDNEEAILQMNLLGHSFYVFTNAETNRTNVVY 171 Query: 29 KRKEGGY 9 KRK+G Y Sbjct: 172 KRKDGRY 178 [146][TOP] >UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Geobacillus RepID=C9RVC1_9BACI Length = 182 Score = 85.5 bits (210), Expect = 3e-15 Identities = 59/187 (31%), Positives = 104/187 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++++VE K+G+ ++++ +V+V ++ + + G+G + EVT+ H ++ Sbjct: 12 VTPALREYVEKKIGK-LERYFDRTDDVNVHVNLKVYND-GQG----KIEVTIPIP-HLLL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE E Y +IDLV+ ++R++RK K K R + +L I +E+EE+ Sbjct: 65 RAEERHEDMYAAIDLVTDKLERQIRKHKTKVNRKLRDREKEAKLAAPVSIGASAAENEEE 124 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET NIVY Sbjct: 125 F---------------EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 170 RRKDGKY 176 [147][TOP] >UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group RepID=B7IPV2_BACC2 Length = 180 Score = 85.5 bits (210), Expect = 3e-15 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV I+R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVMDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [148][TOP] >UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BYR7_9CLOT Length = 178 Score = 85.5 bits (210), Expect = 3e-15 Identities = 59/187 (31%), Positives = 99/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ +++ VE K+G+ ++K+ E+ V LS ++ EVT+ K + ++ Sbjct: 12 VTPGLRETVEHKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIEVTIPVKGN-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+LRK K K RH +G N E Sbjct: 62 RSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGN------------FRQEFF 107 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E E + DDE + +VRTK F + P+ +A Q++++ HDF+ F N +T E+N+VY Sbjct: 108 ESEYATEDDDEVK----IVRTKRFGIKPMYPEDACIQMDLLGHDFFVFCNADTDEVNVVY 163 Query: 29 KRKEGGY 9 +RK G + Sbjct: 164 RRKNGTF 170 [149][TOP] >UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AN97_9BACE Length = 179 Score = 85.5 bits (210), Expect = 3e-15 Identities = 59/187 (31%), Positives = 97/187 (51%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++D +K+ VE+K+G+ + + EV V LS ++ EVT+ K ++ Sbjct: 15 VTDGLKEAVEEKLGK-LDRFFAPDTEVKVTLSVE--------KERQKIEVTIPVKG-SII 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+L+K K K D K + F++ + D++ Sbjct: 65 RSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID-----KQQDAAAFAQEYIDKEYVDDDA 119 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 +++I +RTK FD+ P+ EA Q+E++ H FY F N ET +IN+VY Sbjct: 120 DVKI--------------IRTKRFDVKPMDPEEACVQMELLGHSFYVFFNSETEQINVVY 165 Query: 29 KRKEGGY 9 KRK Y Sbjct: 166 KRKGNTY 172 [150][TOP] >UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNW3_9FIRM Length = 186 Score = 85.5 bits (210), Expect = 3e-15 Identities = 60/187 (32%), Positives = 99/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ +K +E K+G+ ++++ E++V LS G + + EVT+ K + ++ Sbjct: 12 VTPGLKDAIEQKLGK-LERYFTPETEINVTLSVEKGRQ--------KIEVTIPVKGN-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ ++ Y SIDLV +I+R+LRK K K R P S E Sbjct: 62 RSEQTSDNMYVSIDLVEEVIERQLRKYKNKLV--ARSQGHPT----SYTSTGNSFRKEFF 115 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E E +DDE + +VRTK F + P+ +A Q+E++ H F+ F N ET E+N+VY Sbjct: 116 ETEDDAAEDDEIQ----IVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAETDEVNVVY 171 Query: 29 KRKEGGY 9 KRK+G + Sbjct: 172 KRKDGSF 178 [151][TOP] >UniRef100_Q0TND9 Ribosomal subunit interface protein n=6 Tax=Clostridium perfringens RepID=Q0TND9_CLOP1 Length = 179 Score = 85.5 bits (210), Expect = 3e-15 Identities = 46/129 (35%), Positives = 76/129 (58%) Frame = -2 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 ++R EE + Y SIDLV I+R++RK K + + R+ + L+F+ Sbjct: 60 LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH---------- 105 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F++ ET ++N+ Sbjct: 106 -----IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV 160 Query: 35 VYKRKEGGY 9 VYKRK+G Y Sbjct: 161 VYKRKDGNY 169 [152][TOP] >UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus agalactiae RepID=Q3CZ63_STRAG Length = 184 Score = 85.1 bits (209), Expect = 3e-15 Identities = 58/185 (31%), Positives = 104/185 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++++VE K+ +V +K+ +E+D R++ + E +T + EVT+ + Sbjct: 13 VTEAIREYVETKLSKV-EKYFNEAQELDTRVNLKVYRE-----KTAKVEVTILIDSI-TL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQVFTT-------- 112 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ + + E N++Y Sbjct: 113 EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLY 169 Query: 29 KRKEG 15 KR++G Sbjct: 170 KREDG 174 [153][TOP] >UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group RepID=B5UPY3_BACCE Length = 180 Score = 85.1 bits (209), Expect = 3e-15 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV I+R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [154][TOP] >UniRef100_B1SBZ3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius subsp. infantarius ATCC BAA-102 RepID=B1SBZ3_9STRE Length = 182 Score = 85.1 bits (209), Expect = 3e-15 Identities = 56/185 (30%), Positives = 104/185 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ +VE K+G+ I+K+ +E+D R++ + E +T + EVT+ + Sbjct: 13 VTDAIRNYVESKLGK-IEKYFNAEQELDARVNLKVYRE-----KTAKVEVTILVNSI-TL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV+ I+R++RK K K R +++ SE E + Sbjct: 66 RAEDVSQDMYGSIDLVTDKIERQIRKNKTKIAKKHREKVPASQI--------FTSEFEAE 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 ++ P + VVRTK+ + P+ + EA+ Q++++ HDF+ + + E G NI+Y Sbjct: 118 PVDEGPAVN--------VVRTKHVSLKPMDLDEALLQMDLLGHDFFIYTDAEDGVTNILY 169 Query: 29 KRKEG 15 +R++G Sbjct: 170 RREDG 174 [155][TOP] >UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis RepID=YVYD_BACSU Length = 189 Score = 85.1 bits (209), Expect = 3e-15 Identities = 57/187 (30%), Positives = 98/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A+K HVE K+G++ + + V + DV ++ + + + + EVT+ + Sbjct: 12 VTPALKDHVERKIGKLERYFDHSV-DADVNVNLKFYND-----KESKVEVTI-PMTDLAL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E H E Y +IDL ++ ++R++RK K K R P L + + Sbjct: 65 RSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFREQGSPKYLLANGL---------GS 115 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + +I Q D EEE ++VR K F++ P+ EAI Q+ M+ H+F+ F N ET N+VY Sbjct: 116 DTDIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVFTNAETNLTNVVY 175 Query: 29 KRKEGGY 9 +R +G Y Sbjct: 176 RRNDGKY 182 [156][TOP] >UniRef100_UPI00006DCB57 hypothetical protein CdifQ_04002839 n=1 Tax=Clostridium difficile QCD-32g58 RepID=UPI00006DCB57 Length = 138 Score = 84.7 bits (208), Expect = 4e-15 Identities = 51/139 (36%), Positives = 81/139 (58%) Frame = -2 Query: 425 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 246 EVT+ ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F Sbjct: 2 EVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN 58 Query: 245 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 66 + + + E D+ + DDEE+ + R K F++ P++ EAI Q+E+V H+FY F Sbjct: 59 LDF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMF 113 Query: 65 RNEETGEINIVYKRKEGGY 9 RN++ EINIVYKRK GGY Sbjct: 114 RNQDNFEINIVYKRKAGGY 132 [157][TOP] >UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus RepID=C2U573_BACCE Length = 180 Score = 84.7 bits (208), Expect = 4e-15 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV I+R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [158][TOP] >UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group RepID=B7HEI9_BACC4 Length = 180 Score = 84.7 bits (208), Expect = 4e-15 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV I+R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [159][TOP] >UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW Length = 182 Score = 84.3 bits (207), Expect = 6e-15 Identities = 55/187 (29%), Positives = 106/187 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++++VE K+G+ ++++ ++ V ++ + + + + EVT+ + ++ Sbjct: 12 VTPALREYVEKKIGK-LERYFENTEDIHVHVNLKVYND-----KQGKIEVTIPMPQL-LL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE + Y +IDLV+ ++R++RK K K +L+ E L +++ Sbjct: 65 RAEERHDDMYAAIDLVADKLERQIRKHKTKVN---------RKLRNKETKQVLVTQNNNP 115 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 +E +++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET NIVY Sbjct: 116 PVE----ENEEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 170 RRKDGKY 176 [160][TOP] >UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AY42_HERA2 Length = 186 Score = 84.3 bits (207), Expect = 6e-15 Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLST-RGGGEFGRGPRTRRCEVTLYTKRH 399 L DA K +++K+G+ ++++ + + V+ R T RG GE T + TL Sbjct: 12 LHDAQKAFIQEKLGK-LERYLDGINDWKVECRFETLRGSGE------TYTVQATLLADHG 64 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSE 222 ++RAEE Y +++ V +QR++R+ KEK + +G R E+I PLP+ Sbjct: 65 IILRAEERDRELYAAVEAVHDNLQRQIRRFKEKH-----YRRGKLRRTAGEIIAAPLPAL 119 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 E D E+ +++R K + P+ EAI+Q+E++ H F+ FR+ ET +I Sbjct: 120 PE----------DAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFRDAETEKI 169 Query: 41 NIVYKRKEGGY 9 +VY+R +G Y Sbjct: 170 QVVYRRNDGNY 180 [161][TOP] >UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus agalactiae RepID=Q3DA79_STRAG Length = 184 Score = 84.3 bits (207), Expect = 6e-15 Identities = 58/185 (31%), Positives = 104/185 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++++VE K+ +V +K+ +E+D R++ + E +T + EVT+ + Sbjct: 13 VTEAIREYVETKLSKV-EKYFNEEQELDTRVNLKVYRE-----KTAKVEVTILIDSI-TL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQVFTT-------- 112 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ + + E N++Y Sbjct: 113 EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLY 169 Query: 29 KRKEG 15 KR++G Sbjct: 170 KREDG 174 [162][TOP] >UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY Length = 180 Score = 84.3 bits (207), Expect = 6e-15 Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ EV V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEVKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV ++R++RK K K R P + IL P+ E Sbjct: 61 LRAEETHSDMYAAIDLVVDKVERQIRKHKTKVNRKLREKGSPK----TAFILTEPAATLE 116 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 + K+DE EL VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 117 EV------KEDELEL----VRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [163][TOP] >UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group RepID=B7HX18_BACC7 Length = 180 Score = 84.3 bits (207), Expect = 6e-15 Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV ++R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVLDEVEEDQLELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [164][TOP] >UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FTS3_9FIRM Length = 176 Score = 84.3 bits (207), Expect = 6e-15 Identities = 60/187 (32%), Positives = 99/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L++ +K VEDK+ + ++K+ EV+V LS ++ EVT+ K + Sbjct: 12 LTEGLKAAVEDKLNK-LEKYFTPDTEVNVTLSVE--------KERQKVEVTIPMKG-SYI 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+L+K + K ++ + F DE+ Sbjct: 62 RSEQVSSDMYVSIDLVEEVIERQLKKYRTKLVTKQQNAAAVFKQDFL---------DEKS 112 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E D+EE+ +++RTK FDM P+ +A ++E++ HDFY F N ET ++N+VY Sbjct: 113 E--------DDEEI--KIIRTKKFDMKPMYPEDACVEMELLGHDFYVFINAETEDVNVVY 162 Query: 29 KRKEGGY 9 KRK Y Sbjct: 163 KRKGNTY 169 [165][TOP] >UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group RepID=Q72XS8_BACC1 Length = 180 Score = 84.3 bits (207), Expect = 6e-15 Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV ++R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [166][TOP] >UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MGZ9_9FIRM Length = 176 Score = 84.3 bits (207), Expect = 6e-15 Identities = 54/187 (28%), Positives = 103/187 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++ ++ +E+K+GR+ YL ++D+ ++ E ++ EVT+ K H ++ Sbjct: 12 VTEGIRAAIEEKLGRL---DKYLTDDIDIIVTLSVQKE------RQKIEVTIPMKGH-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ + Y SIDLV I++R++R+ K + K+ L D+++ Sbjct: 62 RAEQDSADMYVSIDLVIDILERQIRRYKTRLMSK----------KYEGAGLKQEFIDKDE 111 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 ++ DE+E+ ++R+K F + P+ V EA Q++++ H+F+ FRN +T E+N+VY Sbjct: 112 DV-------DEDEI--RIIRSKKFAIKPMDVEEACIQMDLLGHNFFVFRNADTFEVNVVY 162 Query: 29 KRKEGGY 9 KRK Y Sbjct: 163 KRKGNTY 169 [167][TOP] >UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ Length = 182 Score = 84.0 bits (206), Expect = 7e-15 Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++++ K+ R+ + E V LS G EVT+ GV+ Sbjct: 12 VTEALREYAVKKISRLEKYFEAPASETTVTLSVTKG--------KHAVEVTIPLV--GVM 61 Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI--LPLPSED 219 RAE+ +E Y SID+V ++R++RK K K RH G L F E + + D Sbjct: 62 LRAEDKSEDMYSSIDVVVDKLERQIRKHKTKMNRKFRHESGVKAL-FKEGLSQTAVSVMD 120 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 EEDE+E+ VRTK F + P+ V EAI Q+ MV H+F+ F N + E+N Sbjct: 121 EEDELEL--------------VRTKRFMLKPMDVEEAILQMNMVGHNFFVFSNIDNKEVN 166 Query: 38 IVYKRKEGGY 9 +VYKR +G Y Sbjct: 167 VVYKRSDGKY 176 [168][TOP] >UniRef100_B5YF17 Ribosomal subunit interface protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YF17_DICT6 Length = 179 Score = 84.0 bits (206), Expect = 7e-15 Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG-V 393 ++D ++Q+ E K+ R + + + ++V S ++ G + R EVT+ K +G + Sbjct: 12 ITDNLQQYAEKKLSR-LSRFFDNIENIEVLFSEE---DWKDGSKRHRVEVTI--KANGRI 65 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 ++A E + SIDLV ++ +L+++KEK D GR E Sbjct: 66 IKASEANQDFRTSIDLVVDKLETQLKRLKEKLVDKGRRA--------------------E 105 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 EI +K+ EE+ +VV+ K F + P+ V EAI Q+E++ HDF+ FR+ ET I +V Sbjct: 106 SIREILAEKEVEEK--PQVVKVKRFLLKPMDVEEAILQMELLGHDFFIFRDAETDRIGVV 163 Query: 32 YKRKEGGY 9 YKRK+G Y Sbjct: 164 YKRKDGKY 171 [169][TOP] >UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI Length = 182 Score = 84.0 bits (206), Expect = 7e-15 Identities = 61/187 (32%), Positives = 107/187 (57%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++++VE K+G+ ++++ V V ++ + + G+G + EVT+ H ++ Sbjct: 12 VTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIPIP-HLLL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE + Y +IDLV+ ++R++RK K K + K +R K ++ P+P+ Sbjct: 65 RAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPVPNGAAAA 119 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET NIVY Sbjct: 120 E-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 170 RRKDGRY 176 [170][TOP] >UniRef100_Q9CHS8 Putative uncharacterized protein ygdA n=1 Tax=Lactococcus lactis subsp. lactis RepID=Q9CHS8_LACLA Length = 185 Score = 83.6 bits (205), Expect = 1e-14 Identities = 55/187 (29%), Positives = 98/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ +VEDK+G+ + K+ EV ++ + E + + EVTL K + + Sbjct: 13 VTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYSE-----KRAKVEVTLPAK-NVTL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ Y SID V ++R++RK K + R+ P F + PL DE Sbjct: 66 RAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQAFGDEFAPLEKADEVA 124 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E + ++VRTK+ + P+ EA+ Q++M+ HDFY F + ++ ++VY Sbjct: 125 EDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVY 172 Query: 29 KRKEGGY 9 +R +G Y Sbjct: 173 RRTDGRY 179 [171][TOP] >UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ENI5_OCEIH Length = 185 Score = 83.6 bits (205), Expect = 1e-14 Identities = 55/187 (29%), Positives = 102/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A+K++VE K+ + ++++ DV ++ + +R EVT+ + ++ Sbjct: 12 VTGAIKEYVEKKISK-LERYFDSAPNTDVHVNLSVYND------EQRIEVTI-PMTNLLL 63 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R E Y ++DLV ++R++RK K K R P F+E+ E Sbjct: 64 RGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHA-FAEM---------EK 113 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E + ++DE +L E+VRTK F++ P+ EAI Q++M+ H+F+ F N+++GE N+VY Sbjct: 114 EARLAEDEEDENQL--EIVRTKRFNLKPMDSEEAILQMDMLGHEFFVFTNDDSGETNVVY 171 Query: 29 KRKEGGY 9 +R++G Y Sbjct: 172 RRRDGKY 178 [172][TOP] >UniRef100_B4U4G1 Ribosomal subunit interface protein n=1 Tax=Streptococcus equi subsp. zooepidemicus MGCS10565 RepID=B4U4G1_STREM Length = 182 Score = 83.6 bits (205), Expect = 1e-14 Identities = 59/185 (31%), Positives = 105/185 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ +VE K+ + I+K+ + +E+D R++ + E +T + EVT+ + Sbjct: 13 VTEAIRDYVESKLTK-IEKYFVVEQEIDARVNLKVYRE-----KTAKVEVTI-PLGSVTL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V SE E + Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-----KMSTSQVFT---SEFEAE 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + E TP+ +VVRTK + P+ V EA Q+E++ HDF+ + + E G N++Y Sbjct: 118 QAEETPEI--------KVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDAEDGATNVLY 169 Query: 29 KRKEG 15 +R++G Sbjct: 170 RREDG 174 [173][TOP] >UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN Length = 182 Score = 83.6 bits (205), Expect = 1e-14 Identities = 61/187 (32%), Positives = 107/187 (57%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++++VE K+G+ ++++ V V ++ + + G+G + EVT+ H ++ Sbjct: 12 VTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIPIP-HLLL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE + Y +IDLV+ ++R++RK K K + K +R K ++ P+P+ Sbjct: 65 RAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPVPNGAAAV 119 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET NIVY Sbjct: 120 E-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 170 RRKDGRY 176 [174][TOP] >UniRef100_C6JQA9 Ribosome-associated protein Y n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JQA9_FUSVA Length = 183 Score = 83.6 bits (205), Expect = 1e-14 Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS---TRGGGEFGRGPRTRRCEVTLYTKRH 399 ++DA+K++ E K+GRV + H ++ E+DV LS T+ G + EV Y Sbjct: 12 VTDAIKKYAETKLGRVEKYHDSII-ELDVSLSAVRTKTGS-------SHTAEVLAYLSG- 62 Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219 ++A Y +ID VS II+ +L+K KEK + + G ++K++ Sbjct: 63 STLKASCTDTDLYAAIDQVSDIIEAQLKKHKEKRAINYGQVPGVKKIKYNP--------- 113 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 E + +E +E VV+ Y P+ + EAI QLE+++ FY F N ETGE+N Sbjct: 114 ETNTVE--------KEAAVNVVKV-YLPPKPMDIEEAILQLELLNRVFYPFTNCETGEMN 164 Query: 38 IVYKRKEGGY 9 IVYKRK+G Y Sbjct: 165 IVYKRKDGDY 174 [175][TOP] >UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox carteri f. nagariensis RepID=Q5MCR1_VOLCA Length = 232 Score = 83.6 bits (205), Expect = 1e-14 Identities = 39/96 (40%), Positives = 64/96 (66%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A+K++VE+KV + IQ ++ ++EVDV LS RGG G + ++ +VT++T R+GVV Sbjct: 85 VTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQKVDVTIFTLRNGVV 144 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 282 R E+ Y +IDLV I+ KL ++KEK G+ Sbjct: 145 RVEDRESNLYAAIDLVCDKIRSKLTRVKEKAITKGK 180 [176][TOP] >UniRef100_Q030Z0 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Lactococcus lactis subsp. cremoris SK11 RepID=Q030Z0_LACLS Length = 185 Score = 83.2 bits (204), Expect = 1e-14 Identities = 55/187 (29%), Positives = 99/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ +VEDK+G+ + K+ EV ++ + E + + EVTL K + + Sbjct: 13 VTDAIRDYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVEVTLPAK-NVTL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ Y SID V ++R++RK K + R+ P F + PL + DE Sbjct: 66 RAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDEFAPLDTTDEVA 124 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E + ++VRTK+ + P+ EA+ Q++M+ HDFY F + ++ ++VY Sbjct: 125 EDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVY 172 Query: 29 KRKEGGY 9 +R +G Y Sbjct: 173 RRTDGRY 179 [177][TOP] >UniRef100_C0MH43 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Steptococcus equi subsp. zooepidemicus H70 RepID=C0MH43_STRS7 Length = 182 Score = 83.2 bits (204), Expect = 1e-14 Identities = 59/185 (31%), Positives = 105/185 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ +VE K+ + I+K+ +E+D R++ + E +T + EVT+ + Sbjct: 13 VTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVEVTI-PLGSVTL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V SE E + Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-----KVSTSQVFT---SEFEAE 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 ++E TP+ +VVRTK + P+ V EA Q+E++ HDF+ + + E G N++Y Sbjct: 118 QVEETPEI--------KVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDAEDGATNVLY 169 Query: 29 KRKEG 15 +R++G Sbjct: 170 RREDG 174 [178][TOP] >UniRef100_B9EAE7 Ribosomal subunit interface protein homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EAE7_MACCJ Length = 186 Score = 83.2 bits (204), Expect = 1e-14 Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVD--VRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396 ++DA++ ++E+K+ + ++++ V E + V++ T G+ + EVT+ K Sbjct: 13 VTDAIRNYIEEKLSK-LERYFTNVPEANAHVKIKTYQDGK-------SKVEVTIPLK-DV 63 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 +RAEE Y +++L+ ++R++RK K K R KG F + P E++ Sbjct: 64 TLRAEERHNDLYAAVNLIVEKLERQIRKHKTKVNRKFRE-KGVKNDIFPVLPGTEPEEEK 122 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 DEIEI +R+K F + P+ EA+ Q+ M+ HDF+ F + ET E NI Sbjct: 123 GDEIEI--------------IRSKQFALKPMDAEEAVLQMNMLGHDFFIFNDRETNETNI 168 Query: 35 VYKRKEGGY 9 VYKRK+G Y Sbjct: 169 VYKRKDGKY 177 [179][TOP] >UniRef100_A9BI17 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BI17_PETMO Length = 199 Score = 83.2 bits (204), Expect = 1e-14 Identities = 53/194 (27%), Positives = 105/194 (54%), Gaps = 9/194 (4%) Frame = -2 Query: 569 LSDAVKQHVEDKVGR---VIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRH 399 L++A++ ++E ++ + +++KH +V DVR++ G + E+T + Sbjct: 12 LTEALENYIEKRMSKPDHLLKKHPDIVSPSDVRITKERG--------IYKVEITTHINPL 63 Query: 398 G-VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-----ETDHGRHMKGPNRLKFSEVIL 237 +++ EE + Y +ID V+ ++RK+RK+K + TD M+ L+ ++ Sbjct: 64 SKIIKVEERSNDLYEAIDEVTDSLERKIRKLKNRLQEQSRTDKKARMEIEQNLQNPDIKN 123 Query: 236 PLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNE 57 +E+ E EIE P ++VRTK FD+ ++V EA+ Q++++ H F+ FRN Sbjct: 124 LDLAEENESEIEEKPDAP-------KIVRTKNFDLTLMSVEEAMLQMQLLGHSFFVFRNP 176 Query: 56 ETGEINIVYKRKEG 15 + I+++Y+RK+G Sbjct: 177 DNDAISVLYERKDG 190 [180][TOP] >UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Bacillus cereus group RepID=A9VQA3_BACWK Length = 180 Score = 83.2 bits (204), Expect = 1e-14 Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV I+R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F N +T E N+V Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [181][TOP] >UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus salivarius ATCC 11741 RepID=C2EGB2_9LACO Length = 184 Score = 83.2 bits (204), Expect = 1e-14 Identities = 52/144 (36%), Positives = 82/144 (56%) Frame = -2 Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261 +T + EVT+ + V+RAEE + Y SIDLV+ ++R++RK K K R KG Sbjct: 50 KTAKVEVTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKN 107 Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81 +F+ P DE++E+E + E+VRTK + P+ EA+ Q++M+ H Sbjct: 108 FEFA------PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGH 152 Query: 80 DFYAFRNEETGEINIVYKRKEGGY 9 DF+ + + E G INIVY+R++G Y Sbjct: 153 DFFIYEDAENGGINIVYRRRDGRY 176 [182][TOP] >UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=C0FKQ0_9CLOT Length = 175 Score = 83.2 bits (204), Expect = 1e-14 Identities = 56/142 (39%), Positives = 77/142 (54%) Frame = -2 Query: 434 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 255 ++ EVT+ K H ++RAEE + Y SIDLV II+R+L+K K K D K + Sbjct: 48 QKIEVTIPVKGH-IIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLID-----KKQAPVD 101 Query: 254 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 75 FSE+ + SE + DEI+I + K F M P+ EA Q+E++ H F Sbjct: 102 FSELFVQEESEPD-DEIKIE--------------KVKKFAMKPMDPEEACVQMELLGHSF 146 Query: 74 YAFRNEETGEINIVYKRKEGGY 9 Y F N ET E+N+VYKRK Y Sbjct: 147 YVFLNAETEEVNVVYKRKGHTY 168 [183][TOP] >UniRef100_Q5M196 Ribosomal subunit interface protein, ribosomal protein S30AE family n=2 Tax=Streptococcus thermophilus RepID=Q5M196_STRT1 Length = 182 Score = 82.8 bits (203), Expect = 2e-14 Identities = 62/187 (33%), Positives = 103/187 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ +VE K+ +V +K+ + +E+ R++ + E +T + EVT+ T + Sbjct: 13 VTEALRDYVESKLSKV-EKYFHEDQELHARVNLKVYRE-----KTAKVEVTIPTGSV-TL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ + YGSIDLV I R++RK K K R K P FS +E ++ Sbjct: 66 RAEDVSLDMYGSIDLVVDKIARQIRKNKTKIARKYRE-KVPTGEMFS-------TEFNKE 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E+E P EVVRTK ++ P+ V EAI Q+E++ HDF+ + + E N++Y Sbjct: 118 EVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIYTDSEDHTTNVLY 169 Query: 29 KRKEGGY 9 KR++G Y Sbjct: 170 KREDGNY 176 [184][TOP] >UniRef100_C5WIE9 Ribosome-associated factor Y n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WIE9_STRDG Length = 182 Score = 82.8 bits (203), Expect = 2e-14 Identities = 59/185 (31%), Positives = 105/185 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ +VE K+ + I+K+ +E+D R++ + E ++ + EVT+ + Sbjct: 13 VTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KSSKVEVTI-PLGSVTL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV I+R++RK K K R K P F+ +E E + Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-------TEFEAE 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 +++ TP+ +VVRTK + P+ V EA Q+E++ HDF+ + + E GE NI+Y Sbjct: 118 QVDETPEV--------KVVRTKNLTLKPMDVEEARLQMELLGHDFFIYTDAEDGETNILY 169 Query: 29 KRKEG 15 +R++G Sbjct: 170 RREDG 174 [185][TOP] >UniRef100_A2RIX0 Putative Sigma 54 modulation protein n=2 Tax=Lactococcus lactis RepID=A2RIX0_LACLM Length = 185 Score = 82.8 bits (203), Expect = 2e-14 Identities = 55/187 (29%), Positives = 99/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ +VEDK+G+ + K+ EV ++ + E + + EVTL K + + Sbjct: 13 VTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVEVTLPAK-NVTL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ Y SID V ++R++RK K + R+ P F + PL + DE Sbjct: 66 RAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDEFAPLDTTDEVA 124 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E + ++VRTK+ + P+ EA+ Q++M+ HDFY F + ++ ++VY Sbjct: 125 EDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVY 172 Query: 29 KRKEGGY 9 +R +G Y Sbjct: 173 RRTDGRY 179 [186][TOP] >UniRef100_C7G8P2 Ribosomal subunit interface protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G8P2_9FIRM Length = 176 Score = 82.8 bits (203), Expect = 2e-14 Identities = 56/187 (29%), Positives = 95/187 (50%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D +K VEDK+ ++ Y + DV ++ E ++ EVT+ K + + Sbjct: 12 LTDGIKDAVEDKLNKL---EKYFTPDTDVYVTLSVEKE------RQKVEVTIPMKGN-YI 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+L+K + K + + F + Sbjct: 62 RSEQVSNDMYVSIDLVEEVIERQLKKYRTKLVTKQQSAASVFKQDFLDAA---------- 111 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 DD+EE+ +++R+K FDM P+ +A Q+E++ HDF+ F N ET ++N+VY Sbjct: 112 -------SDDDEEI--KIIRSKKFDMKPMYPEDACVQMELLGHDFFVFINAETEDVNVVY 162 Query: 29 KRKEGGY 9 KRK Y Sbjct: 163 KRKGNTY 169 [187][TOP] >UniRef100_C5QVF5 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QVF5_STAEP Length = 189 Score = 82.8 bits (203), Expect = 2e-14 Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ ++E+KVG++ + + + V VR+ T T + EVT+ K Sbjct: 13 ITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKIEVTIPLK-DVT 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y IDL+++ ++R++RK K + R +G + +EV Sbjct: 65 LRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQDIFVAEV---------- 113 Query: 212 DEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 E Q DD E E E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +I Sbjct: 114 QESTANNQADDIESENDIEIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSI 173 Query: 35 VYKRKEGGY 9 VY+RK+G Y Sbjct: 174 VYRRKDGKY 182 [188][TOP] >UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus epidermidis M23864:W1 RepID=C5QQC2_STAEP Length = 191 Score = 82.8 bits (203), Expect = 2e-14 Identities = 52/188 (27%), Positives = 103/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ ++E+K+G++ + + + V V++ T + EVT+ K Sbjct: 13 ITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-DVT 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y IDL+++ ++R++RK K + R +G + +EV E Sbjct: 65 LRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAEV-----QEATP 118 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 +E+ + D++ ++ E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV Sbjct: 119 EEVSGAEEPDNDSDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 176 Query: 32 YKRKEGGY 9 Y+RK+G Y Sbjct: 177 YRRKDGKY 184 [189][TOP] >UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196 RepID=C2SSP0_BACCE Length = 180 Score = 82.8 bits (203), Expect = 2e-14 Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV I+R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F N +T E N+V Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [190][TOP] >UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus RepID=C2Q3D0_BACCE Length = 180 Score = 82.8 bits (203), Expect = 2e-14 Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV I+R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F N +T E N+V Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [191][TOP] >UniRef100_C2HJY8 Ribosome-associated inhibitor A n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HJY8_PEPMA Length = 179 Score = 82.8 bits (203), Expect = 2e-14 Identities = 58/187 (31%), Positives = 91/187 (48%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D +KQ E K+ ++ Y E R+ F + R EVT+ + V+ Sbjct: 12 LTDDLKQMAESKLHKL---DKYFHDEQQARVV------FKKEKDKARVEVTMILDKGVVL 62 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE E +ID V + R++RK K K + N ++F Sbjct: 63 RAEESNEDIKTAIDKVEDALARQIRKHKTKLQ---KRFTESNSIRF-------------- 105 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E + +D+E I +V+TK F + P+ EAI Q+E++DHDF+ F + +T +N+VY Sbjct: 106 --EAVEENNDKEIPIGAIVKTKEFGIKPMDKEEAIMQMELIDHDFFVFLDSKTNNVNVVY 163 Query: 29 KRKEGGY 9 KRK+G Y Sbjct: 164 KRKDGNY 170 [192][TOP] >UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJV5_9FIRM Length = 175 Score = 82.8 bits (203), Expect = 2e-14 Identities = 60/187 (32%), Positives = 100/187 (53%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++D ++ VEDK+G+ ++++ E+ V LS + + EVT+ K + ++ Sbjct: 12 VTDGLRTAVEDKLGK-LERYFTPDTEIIVTLSVEKSRQ--------KIEVTIPVKGN-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+LRK K K D + G + F + + E EED Sbjct: 62 RSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVD--KEKAGDH---FQKAFIEKEYE-EED 115 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E++I RTK FD+ P+ +A Q+E++ H+F+ F N ET ++N+VY Sbjct: 116 EVKIQ--------------RTKKFDIKPMYPEDACVQMELLGHNFFVFCNAETDQVNVVY 161 Query: 29 KRKEGGY 9 KRK Y Sbjct: 162 KRKGNTY 168 [193][TOP] >UniRef100_B6FRG1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRG1_9CLOT Length = 178 Score = 82.8 bits (203), Expect = 2e-14 Identities = 59/187 (31%), Positives = 97/187 (51%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ +K +E K+G+ ++++ E+ V LS ++ EVT+ K H ++ Sbjct: 12 VTPGLKSTIEQKLGK-LERYFTPDTEIIVTLSVE--------KERQKIEVTIPVKGH-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ ++ Y SIDLV +I+R+LRK K K R +G N + E Sbjct: 62 RSEQVSDDMYVSIDLVEEVIERQLRKYKNKLI--ARQQEGGN------------FQSEFF 107 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E E +DE ++I RTK F + P+ +A Q+E++ H+F+ F N ET E+N+VY Sbjct: 108 EAEQDTSNNDEIKII----RTKRFGIKPMFPEDACVQMELLGHNFFVFSNAETDEVNVVY 163 Query: 29 KRKEGGY 9 KRK Y Sbjct: 164 KRKNNTY 170 [194][TOP] >UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26 Tax=Bacillus cereus group RepID=A0RKX8_BACAH Length = 180 Score = 82.8 bits (203), Expect = 2e-14 Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV ++R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [195][TOP] >UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=Y400_STACT Length = 188 Score = 82.8 bits (203), Expect = 2e-14 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ ++EDKVG+ ++++ V V+ + + + + EVT+ + Sbjct: 13 ITDAIRNYIEDKVGK-LERYFTNVPNVNAHVKVKTYAN-----SSTKIEVTI-PLNDVTL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSEDEE 213 RAEE + Y IDL+++ ++R++RK K + NR K E P P+ E Sbjct: 66 RAEERNDDLYAGIDLITNKLERQVRKYKTRV----------NRKKRKESEHEPFPATPET 115 Query: 212 D-EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 E + KDDE E+I R+K F + P+ EA+ Q++++ HDF+ F + ET +I Sbjct: 116 PPETAVDHDKDDEIEII----RSKQFSLKPMDSEEAVLQMDLLGHDFFIFNDRETDGTSI 171 Query: 35 VYKRKEGGY 9 VY+RK+G Y Sbjct: 172 VYRRKDGKY 180 [196][TOP] >UniRef100_C5CEL9 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEL9_KOSOT Length = 178 Score = 82.4 bits (202), Expect = 2e-14 Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 1/186 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQK-HSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++D +K+H++ K+ +V + +DVR+ G + E+T + V Sbjct: 12 VTDTMKEHIDKKLAKVFRAIDEDHFTSMDVRVMKERG--------LYKVEITGHLPGF-V 62 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 VR EE + YG ++ +++ ++R++++ KE+ RH + Sbjct: 63 VRVEERGDDFYGVVEAIANTLERRIKRYKERA--RMRHRASAKEI--------------- 105 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 +E P+ DEEE ++ RTK F + P+ + EA+ Q+EM+ H F+ FRN +T E+N++ Sbjct: 106 --LEAIPEVPDEEERGLQITRTKRFSIKPMKIDEALLQMEMLGHTFFVFRNVDTDEVNVL 163 Query: 32 YKRKEG 15 Y RK G Sbjct: 164 YLRKNG 169 [197][TOP] >UniRef100_B9DV32 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Streptococcus uberis 0140J RepID=B9DV32_STRU0 Length = 182 Score = 82.4 bits (202), Expect = 2e-14 Identities = 61/185 (32%), Positives = 102/185 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ +VE K+ + I+K+ E+D R++ + E +T + EVT+ ++ Sbjct: 13 VTEAIRDYVEAKLAK-IEKYFVEDSEIDTRVNLKVYRE-----KTAKVEVTIILGSM-IL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV I+R++RK K K R K P F SE E + Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFR-------SEFETE 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E+E E +VVRTK + P+ V EA Q+E++ HDF+ + + E GE N++Y Sbjct: 118 EVE--------EGSEVKVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGETNVLY 169 Query: 29 KRKEG 15 +R++G Sbjct: 170 RREDG 174 [198][TOP] >UniRef100_B1YLH2 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLH2_EXIS2 Length = 187 Score = 82.4 bits (202), Expect = 2e-14 Identities = 59/187 (31%), Positives = 97/187 (51%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA+K +VE K+ ++ + + ++ + E ++ EVT+ + ++ Sbjct: 12 VTDALKDYVEKKLEKLTRYFTTPTEAQTAYVNLKVNNE------KQKVEVTI-PMPNLLL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ Y +IDLV ++R++RK K K GR G F + E Sbjct: 65 RAEDVNGDMYAAIDLVVDKLERQIRKHKTKINRRGRAKDGGIGEYFKTL--------EGP 116 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E E ++DE EL E+VRTK F + P+ EAI Q++M+ H F+ F + ETG N+VY Sbjct: 117 EAEAPVYEEDEAEL--ELVRTKRFTLKPMDTEEAILQMDMLGHTFFVFSDAETGNTNVVY 174 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 175 RRKDGRY 181 [199][TOP] >UniRef100_C6QNN3 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNN3_9BACI Length = 183 Score = 82.4 bits (202), Expect = 2e-14 Identities = 58/191 (30%), Positives = 104/191 (54%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++++VE K+G+ ++++ + V ++ + + + + EVT+ + ++ Sbjct: 12 VTPALREYVEKKIGK-LERYFENTENIHVHVNLKVYND-----KQGKIEVTIPMPQL-LL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKET----DHGRHMKGPNRLKFSEVILPLPSE 222 RAEE + Y +IDLV+ ++R++RK K K D + +K + + V P+E Sbjct: 65 RAEERHDDMYAAIDLVADKLERQIRKHKTKVNRKLRDRDKEVK-----QVATVQTNAPAE 119 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 D E EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET Sbjct: 120 DNE-----------EEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRT 166 Query: 41 NIVYKRKEGGY 9 NIVY+RK+G Y Sbjct: 167 NIVYRRKDGKY 177 [200][TOP] >UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus RepID=C2ZFA1_BACCE Length = 180 Score = 82.4 bits (202), Expect = 2e-14 Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV ++R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [201][TOP] >UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271 RepID=C2YZ14_BACCE Length = 180 Score = 82.4 bits (202), Expect = 2e-14 Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV ++R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [202][TOP] >UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44 RepID=C2WEE0_BACCE Length = 180 Score = 82.4 bits (202), Expect = 2e-14 Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++VE K+ + ++++ E+ V L +R EVT+ +T + Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYS--------EKQRVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV I+R++RK K K R P E +E Sbjct: 61 LRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLREKGSPKTTFILTESAATLEEVKE 120 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 D++E+ VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 121 DDLEL--------------VRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [203][TOP] >UniRef100_C2LQ50 Ribosomal subunit interface protein, ribosomal protein S30AE family n=1 Tax=Streptococcus salivarius SK126 RepID=C2LQ50_STRSL Length = 182 Score = 82.4 bits (202), Expect = 2e-14 Identities = 60/187 (32%), Positives = 104/187 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ +VE K+ +V +K+ +E++ R++ + E +T + EVT+ T + Sbjct: 13 VTEALRDYVESKLSKV-EKYFNEDQELNARVNLKVYRE-----KTAKVEVTIPTGSV-TL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV I+R++RK K K R K P FS ++ + Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIARKHRE-KVPTGEVFS-------ADFNNE 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 ++E P EVVRTK ++ P+ V EAI Q+E++ HDF+ + + E N++Y Sbjct: 118 QVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIYTDSEDHTTNVLY 169 Query: 29 KRKEGGY 9 KR++G Y Sbjct: 170 KREDGNY 176 [204][TOP] >UniRef100_A5ZRI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRI8_9FIRM Length = 175 Score = 82.4 bits (202), Expect = 2e-14 Identities = 60/187 (32%), Positives = 96/187 (51%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +S +K VEDK+G+ ++++ EV V LS ++ EVT+ K + ++ Sbjct: 12 VSQGLKTAVEDKLGK-LERYFTPDTEVVVTLSVE--------KERQKIEVTIPMKGN-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV +I+R+LRK K K D K F + L Sbjct: 62 RSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQKEYL--------- 107 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 KD EE+ +++RTK F + P+ +A Q+E++ H+F+ F N ET ++N+VY Sbjct: 108 ------DKDYEEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVFFNAETEQVNVVY 161 Query: 29 KRKEGGY 9 KRK Y Sbjct: 162 KRKGNTY 168 [205][TOP] >UniRef100_UPI0001789185 sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789185 Length = 188 Score = 82.0 bits (201), Expect = 3e-14 Identities = 67/190 (35%), Positives = 100/190 (52%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA+K +V+ K+ R L + D ++ G EVT+ GVV Sbjct: 12 VTDALKDYVDKKLSR-------LDKYFDAPPTSEGYVTLSVIRGLHTVEVTIPLT--GVV 62 Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK--FSEVILPLPSED 219 RAE+ ++ Y SID V ++R++RK K K R +K LK +E S+ Sbjct: 63 LRAEDRSDDMYASIDAVVDKLERQIRKHKTKLN---RKIKQEGGLKTLIAENGAAATSQV 119 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 + +++E DE+E EVVRTK F M P+ V EAI Q+ MV H+F+ F N +T E+N Sbjct: 120 DAEQVEY-----DEDEY--EVVRTKRFTMKPMDVEEAILQMNMVGHNFFVFSNIDTQEVN 172 Query: 38 IVYKRKEGGY 9 +VYKR +G Y Sbjct: 173 VVYKRDDGKY 182 [206][TOP] >UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans RepID=Q9K6W6_BACHD Length = 187 Score = 82.0 bits (201), Expect = 3e-14 Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++ A++++VE KVG++ + V +V+VR+ EVT+ R + Sbjct: 12 VTPALREYVEKKVGKLERYFDTTPVADVNVRMQVLNNLHI--------IEVTIPMSRL-L 62 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV ++R++RK K K R +G + F + P+ EE Sbjct: 63 LRAEEKHSDMYAAIDLVIEKLERQIRKHKTKVNRKFRQ-EGSLKYMFKNDLEPMDGMREE 121 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 +E +E++L +VVR K F++ P+ EAI Q++M+ H+F+ F N +G+ N+V Sbjct: 122 ILLE------EEDDL--QVVRKKRFNLKPMDTEEAILQMDMLGHNFFVFSNAISGDTNVV 173 Query: 32 YKRKEGGY 9 Y+RK+G Y Sbjct: 174 YRRKDGKY 181 [207][TOP] >UniRef100_C4W9L5 Ribosomal subunit interface protein n=1 Tax=Staphylococcus warneri L37603 RepID=C4W9L5_STAWA Length = 191 Score = 82.0 bits (201), Expect = 3e-14 Identities = 53/188 (28%), Positives = 102/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ ++E+K+G++ + + + V V++ T T + EVT+ K Sbjct: 13 ITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------TTKVEVTIPLK-DVT 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y +DL+++ ++R++RK K + R +G + +EV E Sbjct: 65 LRAEERHDDLYAGVDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAEV-----QEAPP 118 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 +EI + +D + E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV Sbjct: 119 EEISGAEENNDNDI---EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 175 Query: 32 YKRKEGGY 9 Y+RK+G Y Sbjct: 176 YRRKDGKY 183 [208][TOP] >UniRef100_C4L5L1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L5L1_EXISA Length = 187 Score = 81.6 bits (200), Expect = 4e-14 Identities = 59/187 (31%), Positives = 96/187 (51%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A+K +VE K+ ++ + Y D + + + ++ EVT+ + ++ Sbjct: 12 VTPAIKDYVEKKLEKLTR---YFTTPTDAQTAYVNLKVYNE---KQKVEVTI-PMPNLLL 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ Y +IDLV ++R++RK K K GR +G E L D+ Sbjct: 65 RAEDINLDMYAAIDLVVDKLERQIRKHKTKLNRKGRGKEGG----VGEYFKSLEGPDD-- 118 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 TP DE+E E+VRTK F + P+ EAI Q++M+ H F+ F + ETG N+VY Sbjct: 119 ----TPAVYDEDEAELELVRTKRFTLKPMDTEEAILQMDMLGHSFFVFSDAETGNTNVVY 174 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 175 RRKDGKY 181 [209][TOP] >UniRef100_C0M6F8 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Streptococcus equi subsp. equi 4047 RepID=C0M6F8_STRE4 Length = 182 Score = 81.6 bits (200), Expect = 4e-14 Identities = 59/185 (31%), Positives = 104/185 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ +VE K+ + I+K+ +E+D R++ + E +T + EVT+ + Sbjct: 13 VTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVEVTI-PLGSVTL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V SE E + Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-----KMSTSQVFT---SEFEAE 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + E TP+ +VVRTK + P+ V EA Q+E++ HDF+ + + E G N++Y Sbjct: 118 KAEETPEI--------KVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDAEDGATNVLY 169 Query: 29 KRKEG 15 +R++G Sbjct: 170 RREDG 174 [210][TOP] >UniRef100_B7A6F1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A6F1_THEAQ Length = 186 Score = 81.6 bits (200), Expect = 4e-14 Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQ-KHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ +VE K+ R+ + ++ L+ +V + L+ E + + EV L G+ Sbjct: 13 ITDAIRDYVEKKLSRLDRYQNGELMAKVVLSLAGSPHVE-----KRAKAEVQLDLPG-GL 66 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM-KGPNRLKFSEVILPLPSEDE 216 +R EE + Y +ID + ++ +L++ KE+ RH +GP P P + Sbjct: 67 LRVEEEDQDLYAAIDRMVDRLEIQLKRYKERRFVGRRHTYQGP----------PPPEVRD 116 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 + + + EEE +VR K F+M P+ EA+ Q+E + HDF+ FRN +T EIN+ Sbjct: 117 MEAL-----RKPEEEEGPRIVRVKRFEMKPMDPEEAVFQMEALGHDFFVFRNAKTDEINV 171 Query: 35 VYKRKEGGY 9 VY+RK+G Y Sbjct: 172 VYRRKDGNY 180 [211][TOP] >UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GE66_PHATR Length = 209 Score = 81.6 bits (200), Expect = 4e-14 Identities = 67/194 (34%), Positives = 96/194 (49%), Gaps = 8/194 (4%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQK--HSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396 L+ A+ +HV ++G I K + ++E DV LS + G R EV K Sbjct: 22 LTPALVEHVNKRIGGQINKLASNGAIQECDVILSVSKNPKVKNG---HRVEVVTNLKGTS 78 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSEVILPLPSE 222 ++ E + Y SID S + RKL K K+ HG G + + EV+ E Sbjct: 79 IICHNESPDM-YASIDAASHALYRKLCKYKDNRVAGWHGGEKMGNDIM---EVL-----E 129 Query: 221 DEEDEIEITPQKDDEEELIEE---VVRTKYFDMP-PLTVFEAIDQLEMVDHDFYAFRNEE 54 + ED E T EE + E + + K FD+ P++V EA+ L+ +DHDFY FRN E Sbjct: 130 NLEDVSEYTATPVAEEYVDPEAPTITKVKNFDLTKPMSVQEAVFALDYIDHDFYVFRNAE 189 Query: 53 TGEINIVYKRKEGG 12 T EI++VYKR GG Sbjct: 190 TNEISVVYKRHVGG 203 [212][TOP] >UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus RepID=Y704_STAAB Length = 190 Score = 81.6 bits (200), Expect = 4e-14 Identities = 52/188 (27%), Positives = 102/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ ++E+K+G++ + + + V V++ T + EVT+ K + Sbjct: 13 ITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-NVT 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y IDL+++ ++R++RK K + R +G + +E+ E Sbjct: 65 LRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAEL-------QEM 116 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E ++ D+ E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV Sbjct: 117 QETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETDGTSIV 174 Query: 32 YKRKEGGY 9 Y+RK+G Y Sbjct: 175 YRRKDGKY 182 [213][TOP] >UniRef100_Q5HQX7 Uncharacterized protein SERP0419 n=3 Tax=Staphylococcus epidermidis RepID=Y419_STAEQ Length = 189 Score = 81.6 bits (200), Expect = 4e-14 Identities = 54/188 (28%), Positives = 103/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ ++E+KVG++ + + + V VR+ T T + EVT+ K Sbjct: 13 ITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKIEVTIPLK-DVT 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y IDL+++ ++R++RK K + + +H ++ F + + + Sbjct: 65 LRAEERHDDLYAGIDLITNKLERQVRKYKTRV--NRKHRDRGDQDIFVAEVQESTTNNHA 122 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 D+IE E ++ E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV Sbjct: 123 DDIE------SENDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 174 Query: 32 YKRKEGGY 9 Y+RK+G Y Sbjct: 175 YRRKDGKY 182 [214][TOP] >UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L411_RUMHA Length = 176 Score = 81.3 bits (199), Expect = 5e-14 Identities = 60/187 (32%), Positives = 97/187 (51%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ ++ VEDK+G+ ++K+ E+ V LS ++ EVT+ K + ++ Sbjct: 12 VTQGLRSAVEDKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIEVTIPVKGN-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R+E+ + Y SIDLV II+R+LRK K K D + + +F E + EED Sbjct: 62 RSEQVSSDMYVSIDLVEEIIERQLRKYKNKIID--KKQSAGFQPEFVE------KDYEED 113 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 EI +++RTK F P+ +A Q+E++ H+F+ F N ET E+N+VY Sbjct: 114 TNEI------------KIIRTKKFGFKPMYPEDACVQMELLGHNFFVFLNAETEEVNVVY 161 Query: 29 KRKEGGY 9 KRK Y Sbjct: 162 KRKGNTY 168 [215][TOP] >UniRef100_C5R7Z6 Ribosome-associated inhibitor protein Y n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5R7Z6_WEIPA Length = 238 Score = 81.3 bits (199), Expect = 5e-14 Identities = 58/191 (30%), Positives = 107/191 (56%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQ----KHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKR 402 ++DA+ +++E ++ R+ + + SY+ R V+VR G T + EVT+ Sbjct: 61 ITDAMSEYIEKRISRLERYLNTEASYIAR-VNVRSYKEG---------TFKTEVTIQLP- 109 Query: 401 HGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE 222 + ++RAE+ Y ++D VS ++R++RK K K R KG L+ ++ + P+ Sbjct: 110 YLLLRAEDTQTDMYQTVDFVSDKLERQIRKYKTKVNRKSRE-KGYKGLENTDFMAVDPAA 168 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 E+ P+ +D+ E+VRTK+ D+ P+ V EA+ Q+E++ H+F+ F++ ET Sbjct: 169 AVEE-----PEPEDDGL---EIVRTKHVDLKPMDVEEAVLQMELLGHEFFIFQDAETDLP 220 Query: 41 NIVYKRKEGGY 9 +VYKR++G Y Sbjct: 221 AVVYKRRDGKY 231 [216][TOP] >UniRef100_B7DUH5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DUH5_9BACL Length = 180 Score = 81.3 bits (199), Expect = 5e-14 Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 1/185 (0%) Frame = -2 Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV-RA 384 A++++V+ K+ R+ + Y RE D ++ E R E+T++ +GV+ RA Sbjct: 15 ALQEYVDKKIARLTR---YFDREADKQIYVTMAVE----GLDHRVEMTVFV--NGVIFRA 65 Query: 383 EEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEI 204 EE + Y SIDL + ++ ++ + KEK R +GP P + D + Sbjct: 66 EEKSPDMYASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAV 115 Query: 203 EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24 T DDE + VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R Sbjct: 116 AET---DDEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRR 168 Query: 23 KEGGY 9 + G Y Sbjct: 169 RSGDY 173 [217][TOP] >UniRef100_A3DJE4 Sigma 54 modulation protein / SSU ribosomal protein S30P n=3 Tax=Clostridium thermocellum RepID=A3DJE4_CLOTH Length = 177 Score = 81.3 bits (199), Expect = 5e-14 Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 3/190 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A+K+ KVG+ + K+ E + +S + EVT+ + G++ Sbjct: 12 VTEALKEAAVKKVGK-LDKYFRRDAEATITMSVQKNRHI--------VEVTIPFEG-GLL 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIK---EKETDHGRHMKGPNRLKFSEVILPLPSED 219 RAEE + Y SID V ++R++R+ K EK+ G L+F + + Sbjct: 62 RAEEDSPDMYASIDKVIDSLERQIRRNKTKLEKKVHDGS-------LRFENI------KF 108 Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 ++DE+E P+ EVVRTK F + P+TV EAI Q+ ++ H F+ F N ET E N Sbjct: 109 DDDEVEEEPKF--------EVVRTKKFAIKPMTVEEAILQMNLLGHQFFMFSNAETNEAN 160 Query: 38 IVYKRKEGGY 9 +VY+RK+G Y Sbjct: 161 VVYRRKDGNY 170 [218][TOP] >UniRef100_A8SVF0 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SVF0_9FIRM Length = 175 Score = 81.3 bits (199), Expect = 5e-14 Identities = 56/187 (29%), Positives = 99/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++ ++ V+DK+ ++ Y + +++ F ++ EVT+ K H ++ Sbjct: 12 VTEGLRNAVQDKLSKL---EKYFAADTGAQVT------FSVEKDRQKIEVTIPMKGH-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ Y SIDLV +I+R++ K ++K D K N +E + ED ED Sbjct: 62 RAEQVSDDMYVSIDLVVEVIERQVTKHRKKLID-----KEQNVAYLNEAFV---DEDIED 113 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 + +I ++VRTK F + P+ +A Q++++ H+FY FRN ET E+N+VY Sbjct: 114 DDDI------------KIVRTKKFAVKPMYPEDACIQMDLLGHNFYVFRNAETDEVNVVY 161 Query: 29 KRKEGGY 9 KRK Y Sbjct: 162 KRKGNTY 168 [219][TOP] >UniRef100_UPI00004C2450 COG1544: Ribosome-associated protein Y (PSrp-1) n=1 Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C2450 Length = 182 Score = 80.9 bits (198), Expect = 6e-14 Identities = 59/185 (31%), Positives = 103/185 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ +VE K+ + I+K+ +E+D R++ + E R+ + EVT+ + Sbjct: 13 VTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVEVTIPLDSV-TL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV I+R++RK K K R K P F+ +E E + Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-------TEFEAE 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E++ P+ +VVRTK + P+ V EA Q+E++ HDF+ + + E G NI+Y Sbjct: 118 EVDEIPEV--------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSENGATNILY 169 Query: 29 KRKEG 15 +R++G Sbjct: 170 RREDG 174 [220][TOP] >UniRef100_B8FYZ1 Sigma 54 modulation protein/ribosomal protein S30EA n=2 Tax=Desulfitobacterium hafniense RepID=B8FYZ1_DESHD Length = 175 Score = 80.9 bits (198), Expect = 6e-14 Identities = 62/187 (33%), Positives = 94/187 (50%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA+K++V +VG+ ++K+S +V V L G R EVT + ++ Sbjct: 12 VTDALKEYVLKRVGK-LEKYSDEFMDVKVTLLVEEG--------RHRVEVTAPLQGM-IL 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R EE + Y SIDLV ++R++ K + + R LK E+ P ED+ Sbjct: 62 RGEEESGDMYASIDLVVEKLERQIDKYRTRINKRMR----TKVLKDHEIEHPALYEDDS- 116 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 EEVVR K F P++V EAI Q+ +V H+FYAF N +T IN+VY Sbjct: 117 ---------------EEVVRHKKFGTKPMSVEEAIMQMNLVGHNFYAFTNMDTNVINVVY 161 Query: 29 KRKEGGY 9 +R+ G Y Sbjct: 162 RRRSGDY 168 [221][TOP] >UniRef100_B2A816 Sigma 54 modulation protein, SSU ribosomal protein S30P n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A816_NATTJ Length = 178 Score = 80.9 bits (198), Expect = 6e-14 Identities = 56/187 (29%), Positives = 89/187 (47%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A+K+H++ + + + KH E V LS E T++ +V Sbjct: 14 VTNALKEHIQRRFAK-LDKHFDDTVEAQVTLSVIKDNH--------NVEATMFLNGGMLV 64 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R E+ Y S+D V ++R+++K K K R G L E E Sbjct: 65 RGEQSTGDMYASVDQVIDKVERQIKKHKTKINRKLRQSGGS-----------LLKEGAES 113 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 EE E+V+TK F + P+T EA+ Q+E++ HDF+ FRN ET E+N+VY Sbjct: 114 T---------EEGKDPEIVKTKRFAIKPMTPEEAVLQMELIGHDFFVFRNAETEEVNVVY 164 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 165 RRKDGNY 171 [222][TOP] >UniRef100_A3CPW1 30S ribosomal interface protein S30EA, putative n=1 Tax=Streptococcus sanguinis SK36 RepID=A3CPW1_STRSV Length = 180 Score = 80.9 bits (198), Expect = 6e-14 Identities = 57/185 (30%), Positives = 104/185 (56%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ +V K+ + I+K+ +E+D R++ + E +T + EVT+ + Sbjct: 13 VTDALRDYVVSKLEK-IEKYFQAEQELDARVNLKVYRE-----KTAKVEVTIPLGSI-TL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV+ I+R++RK K K ++ NR K + L S EE Sbjct: 66 RAEDISQDMYGSIDLVTDKIERQIRKNKTK-------IERKNRNKVATSQLFTDSFAEE- 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 EE+ +VVR+K+ D+ P+ + EAI Q++++ HDF+ + + E N++Y Sbjct: 118 ----------AEEVPSKVVRSKHIDLKPMDLEEAILQMDLLGHDFFIYSDAEDSSTNVIY 167 Query: 29 KRKEG 15 +R++G Sbjct: 168 RREDG 172 [223][TOP] >UniRef100_C4GCR0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GCR0_9FIRM Length = 176 Score = 80.9 bits (198), Expect = 6e-14 Identities = 63/187 (33%), Positives = 93/187 (49%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L+D +K VED + K RE + T + G+ R E+T+ K G+V Sbjct: 12 LTDGLKSAVED----ALSKLDRYFREDTLAHVTMSVDKAGQ-----RVELTIPVKG-GIV 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R E+ + Y SID S I+ +L K + K D R KG +L E+ D Sbjct: 62 RCEKTTDDMYVSIDAASEGIEDQLTKYRHKLVD--RAHKG--------AVLNAAFEEGFD 111 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E D+EEE+ ++VRTK FD+ P+ +A Q+E++ H F+ F N ET +N+VY Sbjct: 112 E-------DEEEEI--KIVRTKKFDLKPMYAEDACAQMELLGHSFFVFTNAETDAVNVVY 162 Query: 29 KRKEGGY 9 +RK G Y Sbjct: 163 RRKNGSY 169 [224][TOP] >UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum RepID=C6VLR5_LACPJ Length = 188 Score = 80.9 bits (198), Expect = 6e-14 Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 4/191 (2%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVD----VRLSTRGGGEFGRGPRTRRCEVTLYTKR 402 ++ A++ +V+ +VG++ Y VD V L +T + EVT+ Sbjct: 13 VTQAIRDYVQKRVGKL---QKYFDNNVDSIAHVNLKVHPD-------KTAKVEVTIPLP- 61 Query: 401 HGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE 222 + V+RAEE + Y S+DLV+ ++R++RK K K R KG + F+ Sbjct: 62 YLVLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGYKAIDFAAT------- 113 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 DE D +++L +VVRTK + P+ EAI Q++M+ HDF+ + + ET I Sbjct: 114 ---DETVAAADNDQDDKL--DVVRTKRVALKPMDNEEAILQMDMLGHDFFIYEDAETDAI 168 Query: 41 NIVYKRKEGGY 9 NIVY+R +G Y Sbjct: 169 NIVYRRNDGRY 179 [225][TOP] >UniRef100_C2C307 Ribosome-associated inhibitor protein Y n=1 Tax=Listeria grayi DSM 20601 RepID=C2C307_LISGR Length = 189 Score = 80.9 bits (198), Expect = 6e-14 Identities = 55/189 (29%), Positives = 102/189 (53%), Gaps = 2/189 (1%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++ ++ +VE K+ + ++++ + +V ++ + + ++ + EVT+ V+ Sbjct: 13 VTEPIRDYVEKKIDK-LERYFNETPDANVHVNLKVYSD-----KSAKVEVTIPLPNL-VL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR--LKFSEVILPLPSEDE 216 RAEE Y S+DL++ ++R++RK K K R KG + FSE+ PSE+ Sbjct: 66 RAEETNGDLYASVDLIADKLERQIRKHKTKVNRKFRD-KGSEKDYFAFSEINDSTPSEET 124 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 + + +I E+VRTK F + P+ EA+ Q+ ++ H+F+ F + ET NI Sbjct: 125 DSDYDI------------EIVRTKSFSLKPMDSEEAVLQMNLLGHNFFVFNDAETNGTNI 172 Query: 35 VYKRKEGGY 9 VYKRK+G Y Sbjct: 173 VYKRKDGKY 181 [226][TOP] >UniRef100_Q5HHR8 Uncharacterized protein SACOL0815 n=1 Tax=Staphylococcus aureus subsp. aureus COL RepID=Y815_STAAC Length = 190 Score = 80.9 bits (198), Expect = 6e-14 Identities = 52/188 (27%), Positives = 102/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ ++E+K+G++ + + + V V++ T + EVT+ K + Sbjct: 13 ITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-NVT 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y IDL+++ ++R++RK K + R +G + +E+ E Sbjct: 65 LRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAEL-------QEM 116 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E ++ D+ E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV Sbjct: 117 QETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFIDRETDGTSIV 174 Query: 32 YKRKEGGY 9 Y+RK+G Y Sbjct: 175 YRRKDGKY 182 [227][TOP] >UniRef100_UPI000196CE6C hypothetical protein CATMIT_02221 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CE6C Length = 193 Score = 80.5 bits (197), Expect = 8e-14 Identities = 53/187 (28%), Positives = 104/187 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA++ + K+ ++ K+ + ++V+ ++ R P ++ EVT+ T+ + ++ Sbjct: 27 ITDAIEDKITKKLA-LLDKYFIMGQDVEAKVLIR------TYPFGQKIEVTIPTE-YVLL 78 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE ++ Y +IDLV ++R++RK K K + ++ N+L F+ L E EE+ Sbjct: 79 RAEETSDDLYEAIDLVIDKLERQIRKYKTKLSRKSKN----NKLAFNINTLEALEEPEEE 134 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 ++ VV+TK + P+ + EAI Q+E++ H F+ +++ ET +VY Sbjct: 135 DV---------------VVKTKTINPKPMDMEEAIMQMELIGHSFFVYKDIETNTACVVY 179 Query: 29 KRKEGGY 9 KR++GGY Sbjct: 180 KRRDGGY 186 [228][TOP] >UniRef100_C8WT44 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WT44_ALIAC Length = 180 Score = 80.5 bits (197), Expect = 8e-14 Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 1/185 (0%) Frame = -2 Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV-RA 384 A++ +V+ K+ R+ + Y RE D ++ E R E+T++ +GV+ RA Sbjct: 15 ALQDYVDKKIARLTR---YFDREADKQIYVTMAVE----GLDHRVEMTVFV--NGVIFRA 65 Query: 383 EEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEI 204 EE + Y SIDL + ++ ++ + KEK R +GP P + D + Sbjct: 66 EEKSPDMYASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAV 115 Query: 203 EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24 T DDE + VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R Sbjct: 116 AET---DDEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRR 168 Query: 23 KEGGY 9 + G Y Sbjct: 169 RSGDY 173 [229][TOP] >UniRef100_C8P6S3 Ribosomal subunit interface protein n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P6S3_9LACO Length = 179 Score = 80.5 bits (197), Expect = 8e-14 Identities = 50/144 (34%), Positives = 81/144 (56%) Frame = -2 Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261 RT + EVT+ + +RAEE + YGS+DLV+ ++R++RK K K R KG Sbjct: 50 RTYKVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGLKN 107 Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81 L+F +PS+D+ E+ ++VRTK + P+ EA+ Q++M+ H Sbjct: 108 LEF------VPSDDDAASDEL------------KIVRTKQVSLKPMDPEEAVLQMDMLGH 149 Query: 80 DFYAFRNEETGEINIVYKRKEGGY 9 DF+ F++ ET +IVY+R++G Y Sbjct: 150 DFFVFQDAETNGTSIVYRRRDGRY 173 [230][TOP] >UniRef100_C6PFL3 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermoanaerobacter italicus Ab9 RepID=C6PFL3_9THEO Length = 181 Score = 80.5 bits (197), Expect = 8e-14 Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 5/189 (2%) Frame = -2 Query: 560 AVKQHVEDKVGRVIQKHS-YLVREVDVR--LSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 AV + D V + + K S Y + +VR LS + E+T+ K G++ Sbjct: 12 AVTDGLRDAVVKKVSKLSKYFTEDTEVRTVLSVQKNHHIA--------EITIPFK--GII 61 Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI-LPLPSEDE 216 RAEE ++ YGSID V I+R++ K K K NR +E I +PS + Sbjct: 62 FRAEEVSDDMYGSIDRVVDKIERQILKHKTKLK---------NRFGANESIRFEIPSVYQ 112 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 E K++EEE E+V+TK F + P++ EAI Q+ ++ H+F+ F N +T IN+ Sbjct: 113 E-------AKEEEEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINV 165 Query: 35 VYKRKEGGY 9 VYKRK+G Y Sbjct: 166 VYKRKDGKY 174 [231][TOP] >UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LIX7_9FIRM Length = 176 Score = 80.5 bits (197), Expect = 8e-14 Identities = 58/188 (30%), Positives = 103/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++ ++ V DK+G+ ++++ E+ V +S ++ EVT+ K + ++ Sbjct: 12 ITEGLRTTVMDKLGK-LERYFTPDTEIIVTMSVE--------KERQKIEVTIPVKGN-II 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFSEVILPLPSEDEE 213 R+E+ + Y SIDLV +I+R+LRK K K +H +G N R +F E +E Sbjct: 62 RSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSNFRREFIE---------KE 110 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 + +E EE+ ++RTK+F + P+ +A Q+E++ H+F+ F N ET E+N+V Sbjct: 111 ETVE-------PEEV--NIIRTKHFGIKPMYPEDACIQMELLGHNFFVFCNAETEEVNVV 161 Query: 32 YKRKEGGY 9 YKRK Y Sbjct: 162 YKRKGNTY 169 [232][TOP] >UniRef100_B2TK14 Ribosome-associated protein Y n=3 Tax=Clostridium botulinum RepID=B2TK14_CLOBB Length = 177 Score = 80.5 bits (197), Expect = 8e-14 Identities = 56/187 (29%), Positives = 100/187 (53%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 L++A+++ VE K+ + + K+ E LS + R R+ + V+ Sbjct: 12 LTNALREMVEKKISK-LGKYFNSDIEAKATLSVQ---------RNRQIVEVMIPFNGVVL 61 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R EE E Y +IDLV+ ++R++RK K K + K LKF E++ Sbjct: 62 RGEEANEDMYRAIDLVAEKLERQIRKQKTKLS-----RKKSGSLKFGEIV---------- 106 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 +++P DEEE ++V+ K F + P+ + EAI Q+E+V H+F+ +++ ++ +IN++Y Sbjct: 107 --DLSPVAVDEEEA--KLVKRKRFGVKPMDIDEAILQMELVGHNFFVYQDVDSNKINVIY 162 Query: 29 KRKEGGY 9 KRK+G Y Sbjct: 163 KRKDGDY 169 [233][TOP] >UniRef100_Q5XAQ7 Ribosome-associated factor Y n=10 Tax=Streptococcus pyogenes RepID=RAFY_STRP6 Length = 182 Score = 80.5 bits (197), Expect = 8e-14 Identities = 59/185 (31%), Positives = 103/185 (55%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ +VE K+ + I+K+ +E+D R++ + E R+ + EVT+ + Sbjct: 13 VTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVEVTIPLDSV-TL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAE+ ++ YGSIDLV I+R++RK K K R K P F+ +E E + Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-------TEFEAE 117 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E++ P+ +VVRTK + P+ V EA Q+E++ HDF+ + + E G NI+Y Sbjct: 118 EVDEIPEV--------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGATNILY 169 Query: 29 KRKEG 15 +R++G Sbjct: 170 RREDG 174 [234][TOP] >UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius UCC118 RepID=Q1WSW6_LACS1 Length = 184 Score = 80.1 bits (196), Expect = 1e-13 Identities = 51/144 (35%), Positives = 81/144 (56%) Frame = -2 Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261 +T + EVT+ + V+RAEE + Y SIDLV+ ++R++RK K K R KG Sbjct: 50 KTAKVEVTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKN 107 Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81 +F+ P DE++E+E + E+VRTK + P+ EA+ Q++M+ H Sbjct: 108 FEFA------PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGH 152 Query: 80 DFYAFRNEETGEINIVYKRKEGGY 9 DF+ + + E G I IVY+R++G Y Sbjct: 153 DFFIYEDAENGGIYIVYRRRDGRY 176 [235][TOP] >UniRef100_B8CYM6 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Halothermothrix orenii H 168 RepID=B8CYM6_HALOH Length = 184 Score = 80.1 bits (196), Expect = 1e-13 Identities = 53/187 (28%), Positives = 93/187 (49%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A+K++ +KV ++ + +E + + G EVT Y ++ Sbjct: 12 VTPALKEYAIEKVSKLGKYFDGEPQEAHISMEVEKGRHI--------VEVTAYLNGL-IL 62 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 R EE ++ Y SID V ++R++ K K K R K + ++ E + + Sbjct: 63 RGEEESQDMYASIDGVLEKLERQVHKYKTKINRKIRERKQEFKKEYKE--------ERRE 114 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 EI +E+E +VRTK F + P++V EA Q++++ HDF+ F N T ++N+VY Sbjct: 115 EI----LNSEEDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTNANTEQVNVVY 170 Query: 29 KRKEGGY 9 KRK+G Y Sbjct: 171 KRKDGNY 177 [236][TOP] >UniRef100_C5VNV1 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VNV1_CLOBO Length = 178 Score = 80.1 bits (196), Expect = 1e-13 Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 2/131 (1%) Frame = -2 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222 ++RAEE Y +IDLV ++R++RK K K + HG + LKF + +P Sbjct: 60 ILRAEEANNDMYAAIDLVLEKLERQIRKQKTKLEKRKHG------DALKFQFIPEYIP-- 111 Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42 KD E+ + ++V+TK F + P++ EA+ Q+E++ H+F+ FRN +T E+ Sbjct: 112 -----------KDAEDNVESKIVKTKKFAVKPMSNEEAVLQMELLGHNFFVFRNSDTDEV 160 Query: 41 NIVYKRKEGGY 9 N++YKRK+G Y Sbjct: 161 NVLYKRKDGQY 171 [237][TOP] >UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NVZ2_9BACL Length = 181 Score = 80.1 bits (196), Expect = 1e-13 Identities = 57/187 (30%), Positives = 102/187 (54%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++ A++++VE+KV + ++K+ E +V + + ++ E+T+ R + Sbjct: 13 ITQAIREYVENKVSK-LEKYFADSLEANVYANAKVYKN-----NKKKIEITV-PLRGVTL 65 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE E Y ++DLV ++R++RK K K GR KG F+E Sbjct: 66 RAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KG-----FAE------------ 107 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 EI +T + ++ EE ++ + K + P+T EA+ Q+E++ HDF+AF + T EI++VY Sbjct: 108 EIILTSELEEAEETTLDLGKVKQLKVEPMTREEAVFQMELLGHDFFAFLDNTTNEISVVY 167 Query: 29 KRKEGGY 9 KR++ GY Sbjct: 168 KRRDTGY 174 [238][TOP] >UniRef100_C3GRH2 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1 RepID=C3GRH2_BACTU Length = 180 Score = 80.1 bits (196), Expect = 1e-13 Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393 ++ A+K++V K+ + ++++ E+ V L + R EVT+ +T + Sbjct: 12 VTPALKEYVGKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE Y +IDLV ++R++RK K K R KG + F ILP Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 167 YGRKDGKY 174 [239][TOP] >UniRef100_C1P990 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Bacillus coagulans 36D1 RepID=C1P990_BACCO Length = 187 Score = 80.1 bits (196), Expect = 1e-13 Identities = 56/188 (29%), Positives = 103/188 (54%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGP-RTRRCEVTLYTKRHGV 393 ++ A++ ++E KV ++ + Y V D ++ + P +T + E+T+ + V Sbjct: 13 VTPAIRDYIEKKVNKLDR---YFVETPDTSVNVK----LKVNPDKTSKVEITIPMPQV-V 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE E Y +IDL++ ++R++RK K K R KG R F+ L + Sbjct: 65 LRAEETNEDMYAAIDLIADKLERQIRKHKTKVNRKLRE-KGSTRELFTTPDTGLKEKQA- 122 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 +K+++ EL ++VRTK+F++ P+ EA+ Q+ ++ H+F+ + + ET NIV Sbjct: 123 -------RKEEDSEL--QIVRTKHFNLKPMDSEEAVLQMNLLGHNFFIYTDAETNHTNIV 173 Query: 32 YKRKEGGY 9 Y+RK+G Y Sbjct: 174 YRRKDGKY 181 [240][TOP] >UniRef100_C0VBX3 SSU ribosomal protein S30P n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=C0VBX3_9MICO Length = 216 Score = 80.1 bits (196), Expect = 1e-13 Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 4/186 (2%) Frame = -2 Query: 554 KQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEH 375 ++HVEDK+ +V Q S LV+ VDV ++ + R E+T+ K V+RAE Sbjct: 17 RRHVEDKLTKVTQL-SPLVQRVDVEVTHENNPKLS--DVRERVELTVRAKGP-VIRAEAA 72 Query: 374 AETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLK-FSEVILPLPSEDEEDEIE 201 A+ YG++DL + +LR+ +++ DH R ++ P ++ + EV P P E EE Sbjct: 73 ADDRYGALDLAIDKLIERLRRSRDRRKDHRRTYVTAPVDVRPYDEVRSPEP-EPEESVPL 131 Query: 200 ITPQKDDEEELIEE--VVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYK 27 + + E +L + V+R K +TV +A+ ++E+V HDF+ F ++ET + VYK Sbjct: 132 VVDGEAVEHQLGDSPVVIRQKLHSADAMTVDDAVYEMELVGHDFFLFIDKETARPSAVYK 191 Query: 26 RKEGGY 9 RK Y Sbjct: 192 RKGWTY 197 [241][TOP] >UniRef100_B9ND14 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ND14_POPTR Length = 102 Score = 80.1 bits (196), Expect = 1e-13 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 14/101 (13%) Frame = -2 Query: 314 KIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI-------- 165 KIK+KE+DHGRHMKG N+ K E P+ E D ++ +KDD+ +EL Sbjct: 2 KIKDKESDHGRHMKGFNKFKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHLVTIH 58 Query: 164 ----EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54 V TKYFDMPP+TV EAI +L VDH FY FR+ E Sbjct: 59 SIISSNAVHTKYFDMPPVTVDEAIVRLGNVDHAFYGFRHAE 99 [242][TOP] >UniRef100_A0Q2Y0 Ribosomal subunit interface protein n=1 Tax=Clostridium novyi NT RepID=A0Q2Y0_CLONN Length = 178 Score = 79.7 bits (195), Expect = 1e-13 Identities = 44/129 (34%), Positives = 75/129 (58%) Frame = -2 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 ++RAE+ Y +ID+V ++R++RK K K + K + LKF + +P Sbjct: 60 ILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKL----QRRKHGDALKFQFIPEYVP---- 111 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 KDDE+ + ++V+TK F + P++ EA+ Q+E++ H+F+ F N ET E+N+ Sbjct: 112 ---------KDDEDNIESKIVKTKRFAIKPMSREEAVLQMELLGHNFFVFTNAETEEVNV 162 Query: 35 VYKRKEGGY 9 +YKRK+G Y Sbjct: 163 LYKRKDGQY 171 [243][TOP] >UniRef100_C6J2M0 Ribosomal subunit interface protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J2M0_9BACL Length = 183 Score = 79.7 bits (195), Expect = 1e-13 Identities = 51/129 (39%), Positives = 70/129 (54%) Frame = -2 Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216 V+RAE+ ++ Y SID V ++R++RK K K R N L + + DE Sbjct: 62 VLRAEDRSDDMYASIDAVVDKLERQIRKHKTKINRKLRQKGVKNSLFVEDATTGSVALDE 121 Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36 EEEL EVVRTK F + P+ V EAI Q+ MV H+F+ F N +T E+N+ Sbjct: 122 -----------GEEEL--EVVRTKRFTLKPMDVEEAILQMNMVGHNFFVFSNIDTKEVNV 168 Query: 35 VYKRKEGGY 9 VYKR +G Y Sbjct: 169 VYKRNDGKY 177 [244][TOP] >UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2ETD9_9LACO Length = 189 Score = 79.7 bits (195), Expect = 1e-13 Identities = 50/144 (34%), Positives = 84/144 (58%) Frame = -2 Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261 RT + EVT+ + +RAEE + YGS+DLV+ ++R++RK K K R KG Sbjct: 59 RTYKVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGFKS 116 Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81 L+F +P++D+ + +++L ++VRTK + P+ EA+ Q++M+ H Sbjct: 117 LEF------VPTDDDAES---------QDDL--KIVRTKQISLKPMDPEEAVLQMDMLGH 159 Query: 80 DFYAFRNEETGEINIVYKRKEGGY 9 DF+ F++ ET +IVY+RK+G Y Sbjct: 160 DFFVFQDAETDGTSIVYRRKDGRY 183 [245][TOP] >UniRef100_C2AF84 SSU ribosomal protein S30P; sigma 54 modulation protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=C2AF84_THECU Length = 221 Score = 79.7 bits (195), Expect = 1e-13 Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 19/206 (9%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++D ++HV++K+ + I++ + + VDV +S R R E+T+ + R V+ Sbjct: 12 VNDRFREHVDNKLAK-IERFARKIIRVDVEVSEEHNPRLA--DRRERVELTIRS-RGPVI 67 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH-GRHMKGPNRLKFSEVILPLPSE-DE 216 RAE AE YG++DL ++ +LR+ ++ H + P +L E + P+ Sbjct: 68 RAEAAAEDRYGALDLALDKLEARLRRSADRRKIHYNSGTRAPAKLAHLEPLTEPPAAAPP 127 Query: 215 EDEIEITPQKDDEE--ELIEE---------------VVRTKYFDMPPLTVFEAIDQLEMV 87 ED E P + E EE VVR K+ P+T+ +A+ ++E+V Sbjct: 128 EDSAEGAPAAEPAAATEPAEEGGNVVPIAMDGDGPLVVREKFHRSAPMTIDQALYEMELV 187 Query: 86 DHDFYAFRNEETGEINIVYKRKEGGY 9 HDF+ FR++E G ++VY+RK Y Sbjct: 188 GHDFFLFRDKENGHPSVVYRRKGWNY 213 [246][TOP] >UniRef100_C1V2G6 SSU ribosomal protein S30P n=1 Tax=Haliangium ochraceum DSM 14365 RepID=C1V2G6_9DELT Length = 207 Score = 79.7 bits (195), Expect = 1e-13 Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 4/190 (2%) Frame = -2 Query: 566 SDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVR 387 ++A+K++ D++ R I+K+ V V +ST G + R +VT+ V Sbjct: 13 TEALKEYARDRMER-IKKYFPDPISVHVVMSTERGYK-------HRVDVTMQLHNGLTVA 64 Query: 386 AEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDE 207 E +E+ + SIDLV++ I+R++R+ K+K H P+ + +S +L + E + Sbjct: 65 GRETSESMHSSIDLVTAKIERQVRRYKDKLRTHKVKNHIPS-VPWSHTVLSDSESENESQ 123 Query: 206 IEITPQKDDEEELIEE----VVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39 + + D E + VVRT+ F P++V EAI QL + F FR++E+G +N Sbjct: 124 VAEGAELDVAAEAVAGAEHIVVRTEKFHADPMSVSEAIMQLNLGGQQFLVFRHDESGRVN 183 Query: 38 IVYKRKEGGY 9 +VY R +G Y Sbjct: 184 VVYHRGDGSY 193 [247][TOP] >UniRef100_B9CQX8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus capitis SK14 RepID=B9CQX8_STACP Length = 191 Score = 79.7 bits (195), Expect = 1e-13 Identities = 53/188 (28%), Positives = 98/188 (52%), Gaps = 1/188 (0%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393 ++DA++ ++EDK+G++ + + + V V++ T + EVT+ K Sbjct: 13 ITDAIRNYIEDKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-DVT 64 Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213 +RAEE + Y IDL++ ++R++RK K + R +G + +EV E Sbjct: 65 LRAEERHDDLYAGIDLITGKLERQVRKYKTRVNRKHRD-RGDQEVFVAEV-----QEASP 118 Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33 E+ + + E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV Sbjct: 119 GEVSGAEESVSDSEI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 176 Query: 32 YKRKEGGY 9 Y RK+G Y Sbjct: 177 YTRKDGKY 184 [248][TOP] >UniRef100_B9NGT0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NGT0_POPTR Length = 71 Score = 79.7 bits (195), Expect = 1e-13 Identities = 37/42 (88%), Positives = 38/42 (90%) Frame = -2 Query: 134 MPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGY 9 MPPLTV EAI+QLE VDHDFY FRNEETGEINIVYKRK GGY Sbjct: 1 MPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGY 42 [249][TOP] >UniRef100_A4XJ41 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XJ41_CALS8 Length = 182 Score = 79.3 bits (194), Expect = 2e-13 Identities = 50/187 (26%), Positives = 92/187 (49%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 ++DA+K +E K+ + ++++ + +V V LS + R ++ Sbjct: 13 VTDALKDRIEKKLSK-LERYVKMNCDVHVTLSVE---------KIRHIVEVTIPFYGMIL 62 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE + Y +IDLV ++R++RK K K + + + F E +++E Sbjct: 63 RAEEASNDMYSAIDLVVDSLERQIRKFKTKIAKRAKDAESLRYMTFEEEAQQETNQEENG 122 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E +I +TK F + P++V EAI Q+ ++ H F+ F N++T ++N+VY Sbjct: 123 EFKIA--------------KTKRFPIKPMSVDEAILQMNLLGHSFFVFLNQDTDKVNVVY 168 Query: 29 KRKEGGY 9 KR +G Y Sbjct: 169 KRNDGAY 175 [250][TOP] >UniRef100_C0X601 Ribosome-associated inhibitor protein Y n=22 Tax=Enterococcus faecalis RepID=C0X601_ENTFA Length = 189 Score = 79.3 bits (194), Expect = 2e-13 Identities = 57/187 (30%), Positives = 99/187 (52%) Frame = -2 Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390 +++A++ +VE KVG+ ++++ E V ++ + E +T + EVT+ + V+ Sbjct: 19 VTEAIRDYVEKKVGK-LERYFSDSPEATVHVNLKVYTE-----KTAKVEVTIPLP-YLVL 71 Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210 RAEE + Y SIDLV ++R++RK K K R G N K + ++ +E+ Sbjct: 72 RAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRET-GRNNTKAAVFLVGEETEETPS 130 Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30 E++I VRTK + P+ EA+ Q+ M+ H+F+ F + ET +IVY Sbjct: 131 ELDI--------------VRTKRLSLKPMDSEEAVLQMNMLGHNFFIFEDAETNGTSIVY 176 Query: 29 KRKEGGY 9 +RK+G Y Sbjct: 177 RRKDGKY 183