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[1][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 297 bits (761), Expect = 3e-79
Identities = 154/187 (82%), Positives = 167/187 (89%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+DAVKQHVEDKVG+ +QKHS+LVREVDVRLS RGGGEFGRGPRTRRCEVTL+TKRHGVV
Sbjct: 81 LTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVV 140
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK E + LP EED
Sbjct: 141 RAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVEQLPV--EED 198
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
EI ++PQ +EEE I+EVVRTKYFDMPPLTV EAI+QLE VDHDFY FRNEETGEINIVY
Sbjct: 199 EI-LSPQ--EEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVY 255
Query: 29 KRKEGGY 9
KRKEGGY
Sbjct: 256 KRKEGGY 262
[2][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 270 bits (691), Expect = 4e-71
Identities = 135/187 (72%), Positives = 159/187 (85%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVV
Sbjct: 89 LTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELGKGPKIRRCEVTLFTKKHGVV 147
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK + PL E+
Sbjct: 148 RAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPL----VEE 203
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E ++ PQK+D +LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI+Y
Sbjct: 204 EADVVPQKED-GDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILY 262
Query: 29 KRKEGGY 9
KRK GGY
Sbjct: 263 KRKAGGY 269
[3][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 270 bits (691), Expect = 4e-71
Identities = 141/187 (75%), Positives = 156/187 (83%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D VK+HVEDKVG+ +QKHS+LVREVDVRLS RGG E G+GPR RRCEVTL+T RHGVV
Sbjct: 97 LTDTVKRHVEDKVGKAVQKHSHLVREVDVRLSVRGG-ELGKGPRIRRCEVTLFTNRHGVV 155
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AET Y SIDLVSSIIQRKLRKIKEKE+DHGRHMKG NRLK E P+P E D
Sbjct: 156 RAEEDAETIYASIDLVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVRE---PVPQVVEGD 212
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E++ Q + E+ IEEVVRTK+FDMPPLTV EAI+QLE VDHDFY FRNEETGEINIVY
Sbjct: 213 ADEVSQQ--EVEDSIEEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVY 270
Query: 29 KRKEGGY 9
KRK GGY
Sbjct: 271 KRKAGGY 277
[4][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 270 bits (691), Expect = 4e-71
Identities = 135/187 (72%), Positives = 159/187 (85%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D V+ HVE+KVG+ +QKHS+LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVV
Sbjct: 21 LTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGG-ELGKGPKIRRCEVTLFTKKHGVV 79
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEEHAET YGSID+VSSIIQRKLRKIKEK++DHGRHMKG NRLK + PL E+
Sbjct: 80 RAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFNRLKVRDPETPL----VEE 135
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E ++ PQK+D +LI E+VRTKYFDMPPLTV EA++QLE VDHDF+ FRNEETGEINI+Y
Sbjct: 136 EADVVPQKED-GDLINEIVRTKYFDMPPLTVPEAVEQLENVDHDFFGFRNEETGEINILY 194
Query: 29 KRKEGGY 9
KRK GGY
Sbjct: 195 KRKAGGY 201
[5][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 270 bits (690), Expect = 6e-71
Identities = 136/187 (72%), Positives = 159/187 (85%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D VK+HVEDKVG+ +QKHS+LVREVDVRLS RGG EFG+GP+ RRCEVTL+TK+HGV+
Sbjct: 99 LTDTVKKHVEDKVGKAVQKHSHLVREVDVRLSVRGG-EFGKGPKIRRCEVTLFTKKHGVI 157
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AET Y SIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK E + P +D+ D
Sbjct: 158 RAEEDAETIYASIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVAE-PVKDDTD 216
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E++ D++E+ I+EVVRTKYFDMPPLTV EAI+QL+ VDHDFY FRNEETGEINI+Y
Sbjct: 217 EVD-GVLGDEDEDYIDEVVRTKYFDMPPLTVSEAIEQLKNVDHDFYGFRNEETGEINIIY 275
Query: 29 KRKEGGY 9
KRK GGY
Sbjct: 276 KRKAGGY 282
[6][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 268 bits (684), Expect = 3e-70
Identities = 132/188 (70%), Positives = 161/188 (85%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
LS+ +KQHVE+KVG+ +QKHS+LVREVDVRLS RGG EFG+GPR RRCEVTL+TK+HGVV
Sbjct: 150 LSEPIKQHVEEKVGKSVQKHSHLVREVDVRLSVRGG-EFGKGPRIRRCEVTLFTKKHGVV 208
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AET Y IDLVS+IIQRKLRKIKEK++DHGRHMKG NRLK E ++ ED ED
Sbjct: 209 RAEEDAETVYACIDLVSTIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVED 268
Query: 209 EIEIT-PQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+ + ++++E++LI+E+VRTK F+MPPLTV EA++QLE+V HDFY F+NEETGEINIV
Sbjct: 269 STDSSVGEEEEEDDLIKEIVRTKTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINIV 328
Query: 32 YKRKEGGY 9
YKRKEGGY
Sbjct: 329 YKRKEGGY 336
[7][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 264 bits (674), Expect = 4e-69
Identities = 135/187 (72%), Positives = 155/187 (82%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
LSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G+GPR RRCEVTL+TKRHGVV
Sbjct: 21 LSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELGKGPRIRRCEVTLFTKRHGVV 79
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK E + + ED+ D
Sbjct: 80 RAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDDAD 139
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E+ + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI+Y
Sbjct: 140 EV----SQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINIIY 195
Query: 29 KRKEGGY 9
KRK GGY
Sbjct: 196 KRKAGGY 202
[8][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 264 bits (674), Expect = 4e-69
Identities = 135/187 (72%), Positives = 155/187 (82%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
LSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G+GPR RRCEVTL+TKRHGVV
Sbjct: 96 LSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELGKGPRIRRCEVTLFTKRHGVV 154
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AET + SIDLVSSIIQRKLRKIK+KE+DHGRHMKG NRLK E + + ED+ D
Sbjct: 155 RAEEDAETIHASIDLVSSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVVEDDAD 214
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E+ + ++E+ IEEVVRTKYFDMPPLTV EAI+QLE V HDFY FR+EETGEINI+Y
Sbjct: 215 EV----SQQEDEDYIEEVVRTKYFDMPPLTVSEAIEQLEHVHHDFYGFRDEETGEINIIY 270
Query: 29 KRKEGGY 9
KRK GGY
Sbjct: 271 KRKAGGY 277
[9][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 251 bits (641), Expect = 3e-65
Identities = 128/190 (67%), Positives = 152/190 (80%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+SD V+ HVEDKVG+ + KHS+LVREVDVRLS RGG + +GP+ RRCEVTL+TKRHGV+
Sbjct: 86 VSDNVRSHVEDKVGKSVAKHSHLVREVDVRLSARGG-DLSKGPKLRRCEVTLFTKRHGVI 144
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE---VILPLPSED 219
RAEE AE+ Y SIDLVSSIIQRKLRKIK+K +DHGRHMKG NR K + V +
Sbjct: 145 RAEEDAESLYSSIDLVSSIIQRKLRKIKDKVSDHGRHMKGFNRSKVRDPEPVRITREEVL 204
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
EE E P ++++ IEEVVRTKYFDMPPLT+ EA++QLE VDHDFYAFRNEETG+IN
Sbjct: 205 EEVESAPAPVSVEDDDFIEEVVRTKYFDMPPLTITEAVEQLENVDHDFYAFRNEETGDIN 264
Query: 38 IVYKRKEGGY 9
I+YKRKEGGY
Sbjct: 265 ILYKRKEGGY 274
[10][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 248 bits (633), Expect = 2e-64
Identities = 127/192 (66%), Positives = 154/192 (80%), Gaps = 5/192 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E G+GP+ RRCEVTL+TK+HGV+
Sbjct: 68 LTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPKIRRCEVTLFTKKHGVI 126
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED--- 219
RAEE AE+ YGSID+VSSIIQRKLRKIKEK++DHGRHMKG +RLK + + L ED
Sbjct: 127 RAEEDAESIYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVLLVQEDLET 186
Query: 218 --EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 45
+E+E+E D + + EVVR K FDMPPL+V EAI+QLE VDHDFY FRNEETGE
Sbjct: 187 LPQEEEVE---DDDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGE 243
Query: 44 INIVYKRKEGGY 9
INIVY+RKEGGY
Sbjct: 244 INIVYRRKEGGY 255
[11][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 242 bits (618), Expect = 1e-62
Identities = 125/192 (65%), Positives = 151/192 (78%), Gaps = 5/192 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+ AVK +VE+K+G+ +QKHS+L REVDVRLS RGG E G+GP+ RRCEVTL+TK+HGV+
Sbjct: 96 LTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGG-ELGKGPKIRRCEVTLFTKKHGVI 154
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED--- 219
RAEE E+ YGSID+VSSIIQRKLRKIKEK++D GRHMKG +RLK + L ED
Sbjct: 155 RAEEDGESIYGSIDMVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPEALLVQEDLET 214
Query: 218 --EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 45
+E+E+E D + + EVVR K FDMPPL+V EAI+QLE VDHDFY FRNEETGE
Sbjct: 215 LSQEEEVE----DDKSDGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGE 270
Query: 44 INIVYKRKEGGY 9
INIVY+RKEGGY
Sbjct: 271 INIVYRRKEGGY 282
[12][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 221 bits (564), Expect = 2e-56
Identities = 114/189 (60%), Positives = 146/189 (77%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
LS+ +K+H+EDKVGR + KH +LVREVDVRLS RGG E GRGP+T RCE+TL+TKRHGV+
Sbjct: 83 LSEKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGG-ELGRGPKTSRCEITLFTKRHGVL 141
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP--LPSEDE 216
RAEE AE+TY SIDL ++I++RKLRKIKEKET+ R G + + I P L E
Sbjct: 142 RAEEDAESTYASIDLAAAIVKRKLRKIKEKETEVRR---GGDADGVWDEIPPADLLPPAE 198
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
D++E +DEE ++ +VVRTK F+MPPLTV EA++QLE VDHDFY FR+E TG++NI
Sbjct: 199 ADDLEAAVGAEDEETVLAKVVRTKVFEMPPLTVEEALEQLENVDHDFYCFRDEATGQVNI 258
Query: 35 VYKRKEGGY 9
+Y+RKEGGY
Sbjct: 259 LYRRKEGGY 267
[13][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 221 bits (562), Expect = 4e-56
Identities = 113/189 (59%), Positives = 146/189 (77%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
LSD +K+H+EDKVGR + KH +LVREVDVRLS RGG E GRGP+T RCE+TL++KRHGV+
Sbjct: 83 LSDKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGG-ELGRGPKTSRCEITLFSKRHGVL 141
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED--E 216
RAEE AE+TY SIDL ++II+RKLRKIKEKET+ R G + E LPL +D E
Sbjct: 142 RAEEDAESTYASIDLAAAIIKRKLRKIKEKETEVRRDGDGGAGGAWEEE-LPLLDDDLVE 200
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
DE+ +DE+ ++ +VVRTK F+MPPLTV EA++QL+ V H+FY FR+E TG++NI
Sbjct: 201 ADELAAAVGAEDEQTVVAKVVRTKVFEMPPLTVEEALEQLDNVGHNFYCFRDEATGQVNI 260
Query: 35 VYKRKEGGY 9
+Y+RKEGGY
Sbjct: 261 LYRRKEGGY 269
[14][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 216 bits (551), Expect = 7e-55
Identities = 114/195 (58%), Positives = 146/195 (74%), Gaps = 8/195 (4%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+DAVK ++E+KVG +QKH+ LVREVDVRLS RGG E G+GP+ RRCEVTL+TK+HGVV
Sbjct: 99 LTDAVKAYIEEKVGIAVQKHANLVREVDVRLSIRGG-EVGKGPKIRRCEVTLFTKKHGVV 157
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AET Y SID+VS II+RKLRKIKEK+ HGR K + K E++ + + +E
Sbjct: 158 RAEEEAETIYASIDIVSDIIRRKLRKIKEKDGGHGRPSKMRKQPKLGELLSTVVMDVKET 217
Query: 209 -EIEITPQKDDEE-------ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54
+ E+ D EE +L +EVVRTKYF+MPP++ EA++QL VDHDFYAFRN E
Sbjct: 218 RDKELDDLADVEEMRYEKIDDLSDEVVRTKYFEMPPMSPEEALEQLMNVDHDFYAFRNME 277
Query: 53 TGEINIVYKRKEGGY 9
+GE+N++YKRK GGY
Sbjct: 278 SGEVNVLYKRKHGGY 292
[15][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 213 bits (542), Expect = 8e-54
Identities = 111/192 (57%), Positives = 147/192 (76%), Gaps = 5/192 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L++ VK+H+E+K GR + KHS LV+EVDVRLS RGG E RGP+ RCE+TL+TKRHGV+
Sbjct: 92 LNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELSRGPKICRCEITLFTKRHGVI 150
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSEDE 216
RAEE AE+TY SIDL SSII+RKLRKIKEKETD RH+KG P + +L +D
Sbjct: 151 RAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKGTKPPVSDWPPSLLDNNDDDA 209
Query: 215 E---DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGE 45
+ ++E +DE+ ++ +VVRTK F+MPPL+V EA++QL VDH+FYAFR+E+TGE
Sbjct: 210 QAQLKDLEEAVGAEDEDTVLTKVVRTKVFEMPPLSVEEAMEQLVNVDHNFYAFRDEKTGE 269
Query: 44 INIVYKRKEGGY 9
+N++YKRKEGG+
Sbjct: 270 MNVLYKRKEGGF 281
[16][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 199 bits (505), Expect = 2e-49
Identities = 106/187 (56%), Positives = 135/187 (72%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+DA+KQ+VE+KVG + S LV+EVDVR+S RGG E GRG + +RCEVTL+TK+HGVV
Sbjct: 21 LTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETGRGGKLQRCEVTLFTKKHGVV 79
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K + + EV+ S++ D
Sbjct: 80 RAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPTKSRHSPRIGEVL----SDEVVD 135
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
I +K D +L +E+VRTKYF+M P+ EA++QL V HDFYAFRN E+GEINI+Y
Sbjct: 136 LDPILGRKPD--DLPDEIVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILY 193
Query: 29 KRKEGGY 9
KR GGY
Sbjct: 194 KRTHGGY 200
[17][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 197 bits (500), Expect = 6e-49
Identities = 109/187 (58%), Positives = 134/187 (71%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+DA+KQ+VE+KVG + S LV+EVDVR+S RGG E GRG R +RCEVTL+TK+HGVV
Sbjct: 99 LTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGG-ETGRGERLQRCEVTLFTKKHGVV 157
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AE+ Y SID VS +I RKLRKIKEK+ HGR K R+ EV+ S + D
Sbjct: 158 RAEEEAESMYASIDRVSDVISRKLRKIKEKDGGHGRPAKYSPRI--GEVL----SNEVVD 211
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
I +K D +L +EVVRTKYF+M P+ EA++QL V HDFYAFRN E+GEINI+Y
Sbjct: 212 LDPILERKPD--DLPDEVVRTKYFEMRPMKPLEALEQLVNVGHDFYAFRNVESGEINILY 269
Query: 29 KRKEGGY 9
KR GGY
Sbjct: 270 KRTHGGY 276
[18][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TFU4_SOYBN
Length = 208
Score = 188 bits (478), Expect = 2e-46
Identities = 97/130 (74%), Positives = 111/130 (85%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+DAVK+HVEDKVG+ +QKHS+LVREVDVRLS RGGGEFGRGPRTRRCEVTL+TKRHGVV
Sbjct: 81 LTDAVKRHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVV 140
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AE+TYGSIDLVSSIIQRKLRKIKEK +DHGRHMKG NRLK P D
Sbjct: 141 RAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKLGS---PWSITYGRD 197
Query: 209 EIEITPQKDD 180
EI ++P++++
Sbjct: 198 EI-LSPREEE 206
[19][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW3_9ROSI
Length = 268
Score = 178 bits (451), Expect = 3e-43
Identities = 96/138 (69%), Positives = 110/138 (79%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
LSD VK+HVEDKVG+ +QK S+LVR VDVRLS RGG E G+GPR RRCEVTL+TKRHGVV
Sbjct: 96 LSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGG-ELGKGPRIRRCEVTLFTKRHGVV 154
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE AET Y SIDL SSIIQRKLRKIK+KE+DHGRHMKG NRLK E P+ E+D
Sbjct: 155 RAEEDAETIYASIDLASSIIQRKLRKIKDKESDHGRHMKGFNRLKVRE---PMHQVVEDD 211
Query: 209 EIEITPQKDDEEELIEEV 156
E++ Q+D E+ IEEV
Sbjct: 212 ADEVSQQED--EDYIEEV 227
[20][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
RepID=C6YXL0_ORYSJ
Length = 321
Score = 173 bits (439), Expect = 7e-42
Identities = 101/192 (52%), Positives = 133/192 (69%), Gaps = 6/192 (3%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L++ VK+H+E+K GR + KHS LV+EVDVRLS RGG E RGP+ RCE+TL+TKRHGV+
Sbjct: 92 LNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELSRGPKICRCEITLFTKRHGVI 150
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSEDE 216
RAEE AE+TY SIDL SSII+RKLRKIKEKETD RH+KG P + +L +D
Sbjct: 151 RAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKGTKPPVSDWPPSLLDNNDDDA 209
Query: 215 E---DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF-RNEETG 48
+ ++E +DE+ ++ VVRTK F+MPPL+ EA++QL DH F+A R + G
Sbjct: 210 QAQLKDLEEAVGAEDEDTVLTRVVRTKVFEMPPLSGEEAMEQLGNGDHTFHALPRRKNGG 269
Query: 47 EINIVYKRKEGG 12
+ V +KEGG
Sbjct: 270 DEPPV--QKEGG 279
[21][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 144 bits (362), Expect = 6e-33
Identities = 88/191 (46%), Positives = 115/191 (60%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
++DA++ +V+ K+ + L E+DV LS R PR + EVT+YT
Sbjct: 12 ITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSV------ARNPRINPKQTAEVTIYTNG- 64
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD-HGRHMKGPNRLKFSEVILPLPSE 222
V+RAEE +E Y SIDLVS I R+LRK KE+ D H R + P V +PL ++
Sbjct: 65 SVIRAEESSENLYASIDLVSDKIARQLRKFKERRQDKHSRSKEEP------VVSVPLVTD 118
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
D TP EL EEVVRTKYF MPP+T+ EA++QLE+VDHDFY FRN ETGEI
Sbjct: 119 LTGDR---TP------ELPEEVVRTKYFAMPPMTLREALEQLELVDHDFYMFRNAETGEI 169
Query: 41 NIVYKRKEGGY 9
N++Y+R GGY
Sbjct: 170 NVIYERNHGGY 180
[22][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q10AC8_ORYSJ
Length = 241
Score = 140 bits (352), Expect = 9e-32
Identities = 70/100 (70%), Positives = 84/100 (84%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L++ VK+H+E+K GR + KHS LV+EVDVRLS RGG E RGP+ RCE+TL+TKRHGV+
Sbjct: 92 LNEKVKEHIEEKAGRAVAKHSQLVKEVDVRLSARGG-ELSRGPKICRCEITLFTKRHGVI 150
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG 270
RAEE AE+TY SIDL SSII+RKLRKIKEKETD RH+KG
Sbjct: 151 RAEEDAESTYASIDLASSIIKRKLRKIKEKETD-VRHLKG 189
[23][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
Length = 127
Score = 140 bits (352), Expect = 9e-32
Identities = 80/146 (54%), Positives = 97/146 (66%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D VK+HVEDKVG+ +QK S+LVREVD RLS R GGE G+GPR R+C RHGVV
Sbjct: 3 LTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVR-GGELGKGPRIRKC-------RHGVV 54
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE +ET Y +IDLV SIIQ KLRK+KE E+DHGRHMKG NRLK D
Sbjct: 55 RAEEDSETIYATIDLVLSIIQSKLRKMKE-ESDHGRHMKGLNRLKI------------RD 101
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDM 132
+ + +K+D++ L E V Y M
Sbjct: 102 DADAVSRKEDDDYLDELVSVASYHQM 127
[24][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 137 bits (346), Expect = 4e-31
Identities = 82/190 (43%), Positives = 113/190 (59%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRRC-EVTLYTKRH 399
++DA++++V K+ + + + EVDV LS R PR TR+ EVT+Y
Sbjct: 12 ITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQAAEVTIYANG- 64
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
V+RAEE +E Y SIDLV+ I R+LRK KE++ D + L +E I+P
Sbjct: 65 SVIRAEESSENLYASIDLVADKISRQLRKYKERKQD-----QKTQALPTTETIVP----- 114
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+ + D EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N ETGEIN
Sbjct: 115 --ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEIN 172
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 173 VIYERNHGGY 182
[25][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 136 bits (342), Expect = 1e-30
Identities = 81/190 (42%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRRC-EVTLYTKRH 399
++DA++++V K+ + + + EVDV LS R PR TR+ EVT+Y
Sbjct: 12 ITDAIREYVHQKIEKAVNHFQNITNEVDVHLSV------ARNPRINTRQAAEVTIYANG- 64
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
V+RAEE +E Y SIDLV+ I R+LRK KE++ D + +E I+P
Sbjct: 65 SVIRAEESSENLYASIDLVADKISRQLRKYKERKQDQKTQAQPT-----TETIVP----- 114
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+ + D EL EEVVRTKYF MPP+TV EA++QL++V HDFY F N ETGEIN
Sbjct: 115 --ETVVADLIGDRTPELPEEVVRTKYFSMPPMTVTEALEQLQLVGHDFYMFHNAETGEIN 172
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 173 VIYERNHGGY 182
[26][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 135 bits (341), Expect = 2e-30
Identities = 82/190 (43%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR--TRRC-EVTLYTKRH 399
++DA++++V K+ + + EVDV LS R PR TR+ EVT+Y
Sbjct: 12 ITDAIREYVHQKIEKAASHFQSITNEVDVHLSV------ARNPRINTRQAAEVTIYANG- 64
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
V+RAEE +E Y SIDLV+ I R+LRK KE+ D + P + +E ++P D
Sbjct: 65 SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDQ-KTQSQPTEVVVAESVVPDLIGD 123
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
TP EL EVVRTKYF MPP+T+ EA++QL++V HDFY FRN ETGEIN
Sbjct: 124 R------TP------ELPNEVVRTKYFSMPPMTLAEALEQLQLVGHDFYMFRNSETGEIN 171
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 172 VIYERNHGGY 181
[27][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DKM6_THEEB
Length = 209
Score = 135 bits (340), Expect = 2e-30
Identities = 81/187 (43%), Positives = 109/187 (58%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++D ++ ++ K+ R ++ EVDV LS P+ + EVT++ V+
Sbjct: 12 ITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRS--TAPK-QTAEVTVFVNG-SVI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE +E Y SIDLV+ I RKLRK+KEK D R K N + EV+ L +
Sbjct: 68 RAEESSENLYASIDLVADKIARKLRKLKEKRQDKSR-AKDTNSVVEPEVVTDLVGDR--- 123
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
TPQ L E+VVR KYF MPP+T+ EA++ LEMVDHDFY FRN +TGEIN+VY
Sbjct: 124 ----TPQ------LPEQVVRMKYFAMPPMTIQEALEHLEMVDHDFYVFRNRDTGEINVVY 173
Query: 29 KRKEGGY 9
+R GGY
Sbjct: 174 ERNHGGY 180
[28][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 135 bits (339), Expect = 3e-30
Identities = 83/191 (43%), Positives = 111/191 (58%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRRCEVTLYTKRH 399
++DA++ +V++K+ R ++ + + EVDV LS R PR + EVT+Y
Sbjct: 13 ITDAIRSYVQEKIERAVKHFAQITSEVDVNLSV------ARNPRISANQSAEVTVYANGT 66
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKFSEVILPLPSE 222
V+RAEE +E Y SID V+ + RKLRK KE+ H RH K S + P
Sbjct: 67 -VIRAEESSENLYASIDRVADKLARKLRKYKERNGVHRIRHSP-----KTSVAVAQQPLT 120
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
D + + + EL EVVRTKYF MPP+TV EA+ QLE+VDHDFY FRN E GEI
Sbjct: 121 DPLNT-------ERQAELPPEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEI 173
Query: 41 NIVYKRKEGGY 9
N++Y RK GGY
Sbjct: 174 NVIYVRKHGGY 184
[29][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 135 bits (339), Expect = 3e-30
Identities = 78/191 (40%), Positives = 116/191 (60%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
++DA++++V K+ + + L E+DV LS R PR + EVTL+
Sbjct: 12 ITDAIREYVHQKIEKAANHYQNLTTEIDVHLSV------ARNPRITTKQTAEVTLFVNG- 64
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
V+RAEE +E Y SIDLV+ I R+LRK KEK R KGPN+ + L + +
Sbjct: 65 SVIRAEESSENLYASIDLVADKIARQLRKYKEK-----RQTKGPNKGSNRSKAVALQTPE 119
Query: 218 EEDEI-EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
E+ I ++T +D EL EEVVR KYF + P++V +A++QL++VDHDFY F N +TG++
Sbjct: 120 EQPLIGDLT--RDRAPELPEEVVRCKYFAISPMSVHDALEQLDLVDHDFYVFENADTGQL 177
Query: 41 NIVYKRKEGGY 9
N++Y+R GGY
Sbjct: 178 NVIYERNHGGY 188
[30][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 133 bits (334), Expect = 1e-29
Identities = 82/191 (42%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPR---TRRCEVTLYTKRH 399
++DA++ +V++K+ R + + + EVDV LS R PR ++ EVT+Y
Sbjct: 13 ITDAIRSYVQEKIERAVSHFAQITSEVDVNLSV------ARNPRISASQSAEVTVYANGT 66
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHG-RHMKGPNRLKFSEVILPLPSE 222
V+RAEE +E Y SID V+ + RKLRK KE+ H RH K S + P
Sbjct: 67 -VIRAEESSENLYASIDRVADKLARKLRKYKERNGIHRVRHTP-----KTSVAVAQQPVT 120
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
D + + + EL EVVRTKYF MPP+TV EA+ QLE+VDHDFY FRN E GEI
Sbjct: 121 DPLNT-------ERQAELPAEVVRTKYFAMPPMTVQEALHQLELVDHDFYVFRNIENGEI 173
Query: 41 NIVYKRKEGGY 9
N++Y R GGY
Sbjct: 174 NVIYVRNHGGY 184
[31][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 132 bits (333), Expect = 1e-29
Identities = 80/190 (42%), Positives = 107/190 (56%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
++DA++++V K+ R + + EV+V LS R PR + EVT+Y
Sbjct: 12 ITDAIREYVHQKIERAVNHFQSITNEVNVHLSV------ARNPRISTKQAAEVTIYANG- 64
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
V+RAEE +E Y SIDLV+ I R+LRK KE+ DH N +E + D
Sbjct: 65 SVIRAEESSENLYASIDLVADKIARQLRKYKERRQDHKTQPIPTNEAVVAEPVADSLIGD 124
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
TP EL EVVRTKYF MPP+T+ EA +QL++V HDFY FRN ETGEIN
Sbjct: 125 R------TP------ELPGEVVRTKYFPMPPMTLAEAQEQLQLVGHDFYMFRNAETGEIN 172
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 173 VIYERNHGGY 182
[32][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 132 bits (331), Expect = 2e-29
Identities = 78/190 (41%), Positives = 108/190 (56%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
++DA++++V K+ + + + EVDV LS R PR + EVT++
Sbjct: 12 ITDAIREYVHQKIEKAVSHFQNITNEVDVHLSV------ARNPRITTKQAAEVTIFANG- 64
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
V+RAEE +E Y SIDLV+ I R+LRK KE+ D + N +V++P P
Sbjct: 65 SVIRAEESSENLYASIDLVADKIARQLRKYKERLQDQKTNAPPTN-----QVLVPEP--- 116
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+ D EL EVVRTKYF MPP+TV EA +QL++V HDFY F N ETGEIN
Sbjct: 117 ----VAADLIGDRTPELPNEVVRTKYFSMPPMTVAEATEQLQLVGHDFYMFHNAETGEIN 172
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 173 VIYERNHGGY 182
[33][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YEZ8_MICAE
Length = 199
Score = 130 bits (328), Expect = 5e-29
Identities = 76/187 (40%), Positives = 111/187 (59%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A+ +VE K+ + ++ + + +VDV LS R P + EVT+Y V+
Sbjct: 12 VTEAIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHKAEVTVYANGT-VI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RA+E +E Y SIDLVS I R+LRK KE+ DH H + +K SEV+ P +D
Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTH----STVKTSEVVQEKPLDDNLI 123
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
D EL EVVR KYF MPP+T+ EA+ QL++VDHDF+ F N++T EIN++Y
Sbjct: 124 G-------DRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFFMFCNKDTNEINVIY 176
Query: 29 KRKEGGY 9
+R GG+
Sbjct: 177 QRNHGGF 183
[34][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 129 bits (323), Expect = 2e-28
Identities = 80/190 (42%), Positives = 110/190 (57%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
++D+++++V K+ + + + EVDV LS R PR + EVT+Y +
Sbjct: 12 ITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSV------ARNPRINTKQTAEVTIYANKT 65
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
V+RA+E +E Y SIDLV+ IQR+LRK KEK+ K + K VI P
Sbjct: 66 -VIRAQESSEDLYASIDLVADKIQRQLRKYKEKQ-----QKKTQTQPKTGAVIHEAPVV- 118
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
ED I D EL EVVR KYF MPP+T+ EA +QL++VDHDFY FRN +T EIN
Sbjct: 119 -EDLIG-----DRTPELPTEVVRMKYFAMPPMTIEEATEQLQLVDHDFYMFRNAKTDEIN 172
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 173 VIYERNHGGY 182
[35][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 129 bits (323), Expect = 2e-28
Identities = 80/191 (41%), Positives = 114/191 (59%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
+++A+ ++V K+ + + + L EVDV LS R PR + EVT+Y
Sbjct: 12 ITEAIHEYVHQKITKAVSHYQQLTNEVDVHLS------IARNPRINPKQTAEVTIYANGT 65
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
V+RA+E +E Y SIDLV+ I R+LRK K+K G+H+ P K +EV+ P
Sbjct: 66 -VIRAQESSENLYASIDLVADKIARQLRKFKDKR--QGKHLHPP---KLAEVVENQPVI- 118
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
ED I D + EL EVVRTKYF MPP+ + +A++QL++VDHDFY F N +TGE+N
Sbjct: 119 -EDLIG-----DRQPELPPEVVRTKYFAMPPMNLQDALEQLQLVDHDFYVFCNADTGELN 172
Query: 38 IVYKR-KEGGY 9
++YKR GGY
Sbjct: 173 VIYKRVNHGGY 183
[36][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 128 bits (322), Expect = 3e-28
Identities = 80/191 (41%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
++DA+ ++V+ K+ + + L EVDV LS R PR + EVT+Y
Sbjct: 12 ITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSV------ARNPRINPRQTAEVTIYANGT 65
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
V+RA+E +E Y SIDLV+ I R+LRK KEK R K K EV+ P D
Sbjct: 66 -VIRAQESSENLYASIDLVADKIARQLRKYKEK-----RMAKQYQLPKTGEVVAQKPIVD 119
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+ D +L EEVVRTKYF MPP+++ EA++QL+++DHDFY FRN ET EIN
Sbjct: 120 DLIG-------DRTVKLPEEVVRTKYFAMPPMSIQEALEQLQLIDHDFYMFRNAETDEIN 172
Query: 38 IVYKRK-EGGY 9
++Y+R GGY
Sbjct: 173 VIYQRSHHGGY 183
[37][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J8B2_CHLRE
Length = 286
Score = 128 bits (322), Expect = 3e-28
Identities = 82/206 (39%), Positives = 113/206 (54%), Gaps = 19/206 (9%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA+K +VE+KV + + S+ ++EVDV LS RGG G + ++ EVT+YT R+GVV
Sbjct: 81 VTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVV 140
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R E+ Y +IDLV I+ KL+KIKEK G P R P DEED
Sbjct: 141 RVEDAENNLYAAIDLVCDKIRAKLQKIKEKAISRG---AWPGRAG------PKEDVDEED 191
Query: 209 ------EIEITPQKDDEEELIE------------EVVRTKYFDM-PPLTVFEAIDQLEMV 87
E+++ Q D+EE ++ V+R+K + P+TV EAID LE V
Sbjct: 192 FQEYLKEVKMDTQLFDKEEQLQRQFAELNRIYPANVMRSKTVVLADPITVEEAIDALEAV 251
Query: 86 DHDFYAFRNEETGEINIVYKRKEGGY 9
H FY FR T + IVYKR+ GGY
Sbjct: 252 GHSFYVFREMTTDTVQIVYKRESGGY 277
[38][TOP]
>UniRef100_C7QW97 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Cyanothece RepID=C7QW97_CYAP0
Length = 205
Score = 127 bits (320), Expect = 5e-28
Identities = 75/187 (40%), Positives = 109/187 (58%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++++ +V++K+ + ++ + +VDV LS R + EVT+Y V+
Sbjct: 19 VTESIHDYVQEKLEKAVKHFQSITTKVDVHLSVARNA---RITNKHKAEVTVYANGT-VI 74
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RA+E +E+ Y SIDLVS I R+LRK KEK + K PN +K EV E +
Sbjct: 75 RAQEGSESLYASIDLVSDKIARQLRKYKEKLNNK----KAPNPVKVGEVTTATAIEGDLI 130
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
D EL EV+R KYF MPP+T+ EA+ QLE+VDHDFY FRN++T EIN++Y
Sbjct: 131 G-------DRTPELPAEVIRMKYFAMPPMTIDEALHQLELVDHDFYMFRNKDTDEINVIY 183
Query: 29 KRKEGGY 9
+R GGY
Sbjct: 184 QRNHGGY 190
[39][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JSS1_MICAN
Length = 199
Score = 127 bits (319), Expect = 6e-28
Identities = 75/187 (40%), Positives = 111/187 (59%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++ + +VE K+ + ++ + + +VDV LS R P R EVT+Y V+
Sbjct: 12 VTEPIHDYVEQKLEKAVKHFNGITTKVDVHLSVEKNA---RIPDRHRAEVTVYANGT-VI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RA+E +E Y SIDLVS I R+LRK KE+ DH + +K SEV+ +E
Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKERLVDHRTNAP----VKTSEVV-------QEK 116
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
++ + D EL EVVR KYF MPP+T+ EA+ QL++VDHDFY F N++T EIN++Y
Sbjct: 117 PLDGSLIGDRTPELPAEVVRMKYFAMPPMTIEEALTQLQLVDHDFYMFCNKDTNEINVIY 176
Query: 29 KRKEGGY 9
+R GG+
Sbjct: 177 QRNHGGF 183
[40][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
6803 RepID=LRTA_SYNY3
Length = 191
Score = 127 bits (319), Expect = 6e-28
Identities = 75/187 (40%), Positives = 109/187 (58%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A+ +VE+KV R ++ L +VDV LS R + EVT+Y V+
Sbjct: 12 VTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSVARNA---RITNKHKAEVTVYANGT-VI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RA+E +E Y SIDLV+ I R+LRK KE+ D K +K SE++ E+
Sbjct: 68 RAQEGSENLYASIDLVADKIARQLRKYKERIQD-----KQHGNVKTSEIV-------EDK 115
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+E D EL EV+R KYF MPP+ + +A++QL++VDHDFY FRN++T EIN++Y
Sbjct: 116 PVEENLIGDRAPELPSEVLRMKYFAMPPMAIEDALEQLQLVDHDFYMFRNKDTDEINVIY 175
Query: 29 KRKEGGY 9
R GGY
Sbjct: 176 IRNHGGY 182
[41][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
Length = 199
Score = 127 bits (318), Expect = 8e-28
Identities = 72/187 (38%), Positives = 112/187 (59%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A+ +V+ K+ + ++ L +VDV LS + R + EVT+Y V+
Sbjct: 12 VTEAIHDYVQQKLEKAVKHFQTLTTKVDVHLSV---AKNARIQNKHKAEVTVYANGT-VI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RA+E +E Y SIDLVS I R+LRK KE++ + H + +K EV+ +++
Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKERKLEQNAH----SPVKAGEVV-------QQE 116
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
IE D + EL EVVR KYF MPP+++ EA++QL++VDHDF+ FRN +T EIN++Y
Sbjct: 117 TIEENLIGDRQPELPPEVVRMKYFGMPPMSIDEALEQLQLVDHDFFMFRNRDTNEINVIY 176
Query: 29 KRKEGGY 9
R GG+
Sbjct: 177 IRNHGGF 183
[42][TOP]
>UniRef100_B1WZE1 Light repressed protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WZE1_CYAA5
Length = 201
Score = 125 bits (314), Expect = 2e-27
Identities = 76/187 (40%), Positives = 109/187 (58%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++++ +V K+ + ++ + L +VDV LS + R + EVT+Y V+
Sbjct: 14 VTESINDYVTQKLEKAVKHYQTLTTKVDVHLSV---AKNARITNKHKAEVTVYANGT-VI 69
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RA+E +E Y SIDLVS I R+LRK KEK +H K + +K EV+ E
Sbjct: 70 RAQEGSENLYASIDLVSDKIARQLRKYKEKINNH----KPQSSVKNPEVL-------PER 118
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
EIE D E L EV+R KYF MPP+++ EA QLE+VDHDFY FRN++T EIN++Y
Sbjct: 119 EIEKDLIGDREAALPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEINVIY 178
Query: 29 KRKEGGY 9
R GG+
Sbjct: 179 MRNHGGF 185
[43][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
Length = 284
Score = 124 bits (311), Expect = 5e-27
Identities = 72/191 (37%), Positives = 117/191 (61%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGR-GPRTRRCEVTLYTKRHG 396
++D+++++ E+K+ + + + VREVDVR S+RGG + G ++ EVT+YT R+G
Sbjct: 91 ITDSIREYAEEKINKAVAHFDQHDVREVDVRCSSRGGADKKTPGGALQKTEVTVYT-RNG 149
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKE-TDHGRHMKGPNRLKFSEVILPLPSED 219
++R+EE A+ Y SID VS ++RKLRK+KEK+ + +H K + + ++ + + D
Sbjct: 150 IIRSEEEADDLYASIDAVSDKLERKLRKVKEKKISKRPKHNKNAPKAQTDAIVEEMQAAD 209
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG-EI 42
E DE +EVVR K+ + TV+EA +++E + H F+AFRN G E+
Sbjct: 210 E--------ALADESMDYDEVVREKFHPVRKCTVYEAAEEMENLGHTFFAFRNVAQGNEV 261
Query: 41 NIVYKRKEGGY 9
N+VYKR GGY
Sbjct: 262 NVVYKRDAGGY 272
[44][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
Length = 199
Score = 123 bits (309), Expect = 8e-27
Identities = 71/187 (37%), Positives = 110/187 (58%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A+ +V++K+ + ++ + +VDV LS + GR + EVT+Y V+
Sbjct: 12 VTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSV---AKNGRVQNKHKAEVTVYANG-AVI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RA+E +E Y SIDLVS I R+LRK KE+ + K + +K +V+ ++
Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKERRLEQ----KAYSPVKTGDVV-------QDQ 116
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+E D + EL EVVR KYF MP +++ EA++QL++VDHDFY FRN T EIN++Y
Sbjct: 117 PVEGNLIGDRQPELPPEVVRMKYFAMPLMSIEEALEQLQLVDHDFYMFRNRNTNEINVIY 176
Query: 29 KRKEGGY 9
R GGY
Sbjct: 177 IRNHGGY 183
[45][TOP]
>UniRef100_Q4CAE1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAE1_CROWT
Length = 199
Score = 122 bits (307), Expect = 1e-26
Identities = 73/187 (39%), Positives = 111/187 (59%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++++ +V+ K+ + ++ + +VDV LS + R + EVT+Y V+
Sbjct: 12 VTESINDYVKQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAEVTVYANGT-VI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RA+E +E Y SIDLVS I R+LRK KEK ++H K + K EV LP ++ +
Sbjct: 68 RAQEGSENLYASIDLVSDKISRQLRKYKEKVSNH----KPQSSAKLPEV---LPEKEVSE 120
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
++ D + EL EV+R KYF MP +++ EA QLE+VDHDFY FRN+ET EIN++Y
Sbjct: 121 DLI----GDRQAELPPEVIRMKYFAMPSMSIEEAKHQLELVDHDFYMFRNQETEEINVIY 176
Query: 29 KRKEGGY 9
R GG+
Sbjct: 177 MRNHGGF 183
[46][TOP]
>UniRef100_A3IRI7 Light repressed protein n=1 Tax=Cyanothece sp. CCY0110
RepID=A3IRI7_9CHRO
Length = 199
Score = 122 bits (307), Expect = 1e-26
Identities = 76/189 (40%), Positives = 110/189 (58%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++++ +V K+ + ++ + +VDV LS + R + EVT+Y V+
Sbjct: 12 VTESINDYVTQKLEKAVKHYQTFTTKVDVHLSV---AKNARITDKHKAEVTVYANGT-VI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRH--MKGPNRLKFSEVILPLPSEDE 216
RA+E +E Y SIDLVS I R+LRK KEK +H +K P+ L +EV +
Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKEKINNHKPQSSVKSPDVLPETEV--------K 119
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
ED I D E EL EV+R KYF MPP+++ EA QLE+VDHDFY FRN++T EIN+
Sbjct: 120 EDLIG-----DREVELPPEVIRMKYFAMPPMSIEEAKHQLELVDHDFYMFRNQDTDEINV 174
Query: 35 VYKRKEGGY 9
+Y R GG+
Sbjct: 175 IYMRNHGGF 183
[47][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 122 bits (306), Expect = 2e-26
Identities = 76/191 (39%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT---RRCEVTLYTKRH 399
++D++ ++V K+ + + L EVDV LS R PR + EVT+Y
Sbjct: 12 ITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSV------ARNPRINPKQTAEVTIYANGT 65
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
V+RA+E +E Y SIDLV+ I R+LRK KEK K + ++ V+ L
Sbjct: 66 -VIRAQESSENLYASIDLVADKIARQLRKYKEKRQSKVNKTKTVDLIESQPVVENLIG-- 122
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
D + EL EVVRTKYF MP +TV EA++QL+++DHDFY F N TGEIN
Sbjct: 123 -----------DRQAELPSEVVRTKYFPMPSMTVEEALEQLQLIDHDFYMFSNGVTGEIN 171
Query: 38 IVYKR-KEGGY 9
++YKR GGY
Sbjct: 172 VIYKRYHHGGY 182
[48][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 121 bits (304), Expect = 3e-26
Identities = 72/188 (38%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ HV K+ + L+ +VDV LS + P+ + EVT++ + VV
Sbjct: 12 ITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQNNPRIA--PK-QTAEVTVFLN-NVVV 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED-EE 213
RAEE +E+ Y SID+V+ + R+LRK KEK D P ++V + + D
Sbjct: 68 RAEESSESLYASIDMVTDKLTRQLRKYKEKRRDQDHATVRP-----TDVDATINAPDITS 122
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+I+ + + +L + VVR+KYF MPP+TV A++ LE+V HDFY FRN ETGEIN++
Sbjct: 123 HNADISEVLNHQPKLPDTVVRSKYFAMPPMTVQTALENLELVGHDFYMFRNVETGEINVI 182
Query: 32 YKRKEGGY 9
Y+R GY
Sbjct: 183 YERNHKGY 190
[49][TOP]
>UniRef100_A5GUZ2 Light repressed protein A homolog n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUZ2_SYNR3
Length = 187
Score = 121 bits (303), Expect = 4e-26
Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
++ A++ + E K+ R + + +V+E DV LS R PR + EVTL+
Sbjct: 12 VTPALRDYTETKLSRAVSHFNGMVQEADVHLSV------ARNPRVPQQTAEVTLFASGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RA+E ++ Y SIDLV+ + R+L++ K++ HG H D
Sbjct: 65 VIRAQERSQNLYASIDLVAGKLARQLQRHKDRRQGHGHH------------------SDL 106
Query: 215 EDEIEITPQKDD-----EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEET 51
+ E E+ P + D EL VVR KYF MPP++V EAI QLE++DHDFY FRN +
Sbjct: 107 QAEPEVMPLQGDMLQGRHAELPAPVVRRKYFAMPPMSVEEAIHQLEVIDHDFYVFRNADN 166
Query: 50 GEINIVYKRKEGGY 9
GE+ +VY+R GGY
Sbjct: 167 GELQVVYQRNHGGY 180
[50][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
RepID=LRTA_SYNP2
Length = 193
Score = 120 bits (301), Expect = 7e-26
Identities = 74/187 (39%), Positives = 104/187 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++++ +VE K+ + + +VDV LS R + EVT+Y V+
Sbjct: 12 VTESIHDYVESKLEKATKHFQTFATKVDVHLSVANNA---RITDKHKAEVTVYANGT-VI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RA+E +E Y SIDLVS I R+LRK KEK H++ K SEV+ ED
Sbjct: 68 RAQEGSENLYASIDLVSDKIARQLRKYKEKNFGKKTHVQE----KTSEVL-------PED 116
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ D EL EVVR KYF MPP+T+ EA++QL++VDHDFY F N++T IN++Y
Sbjct: 117 PVPDNLIGDRAPELPSEVVRMKYFAMPPMTIDEALEQLQLVDHDFYMFLNKDTNAINVIY 176
Query: 29 KRKEGGY 9
R GGY
Sbjct: 177 IRNHGGY 183
[51][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
Length = 207
Score = 118 bits (295), Expect = 4e-25
Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 1/185 (0%)
Frame = -2
Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381
A+ +V+ K+ + + + + E+DV LS + + + EVT+Y V+RAE
Sbjct: 15 AIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAEVTIYANGT-VIRAE 70
Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIE 201
E E Y SIDLVS I R+L+K KEK D KG +L +E ++ D
Sbjct: 71 ECNENLYASIDLVSDKITRQLKKYKEKLRDR----KG--QLSTAET-----ADQLSDGAL 119
Query: 200 ITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24
+T + + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN TGEIN++Y+R
Sbjct: 120 VTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEINVIYER 179
Query: 23 KEGGY 9
GGY
Sbjct: 180 NHGGY 184
[52][TOP]
>UniRef100_Q0ICJ8 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
CC9311 RepID=Q0ICJ8_SYNS3
Length = 191
Score = 117 bits (294), Expect = 5e-25
Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
++ A++++ E K+ R I LV+E DV LS R PR + EVT++
Sbjct: 12 VTPALREYTETKLERAIHHFDDLVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DHG H P ++ P+ED
Sbjct: 65 VIRAQERSENLYASIDLVASKLARQLRRFKERHSDHG-HRTTPTAAN-DVLLTERPTEDS 122
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
E E +L VR KYF MP +++ EA QLE++DHDFY FR++E+GE+ +
Sbjct: 123 LLE-------GKEAQLPSPGVRRKYFAMPAMSLEEARHQLELIDHDFYLFRDKESGELQV 175
Query: 35 VYKRKEGGY 9
+Y R GG+
Sbjct: 176 IYHRNHGGF 184
[53][TOP]
>UniRef100_A5GJ89 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJ89_SYNPW
Length = 195
Score = 117 bits (292), Expect = 8e-25
Identities = 71/190 (37%), Positives = 109/190 (57%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
++ A++ + E K+ R I LV+E DV LS R PR + EVT++
Sbjct: 12 VTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G + SE P
Sbjct: 65 VIRAQERSENLYASIDLVASKLARQLRRFKDRHSDH-HHSHGH---RASET--PTTESVL 118
Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+DE + D +E +L VR KYF MPP+T+ +A QL+++DHDFY FR+ +G++
Sbjct: 119 DDEAIVESLLDGKEVQLPSPGVRRKYFSMPPMTLEQARQQLDLIDHDFYLFRDSASGDLQ 178
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 179 VIYRRNHGGY 188
[54][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5N179_SYNP6
Length = 207
Score = 116 bits (291), Expect = 1e-24
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 1/185 (0%)
Frame = -2
Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381
A+ +V+ K+ + + + + E+DV LS + + + EVT+Y V+RAE
Sbjct: 15 AIHDYVQQKLDKAVSHYQSFLTEIDVHLSV---AKHAKSNPRQTAEVTIYANGT-VIRAE 70
Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIE 201
E E Y SIDLVS I R+L+K KE+ D KG +L +E ++ D
Sbjct: 71 ECNENLYASIDLVSDKITRQLKKYKEELRDR----KG--QLSTAET-----ADQLSDGAL 119
Query: 200 ITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24
+T + + EL +++VRTKYF MP +TV +A+ QL++VDHDFY FRN TGEIN++Y+R
Sbjct: 120 VTDLLNGRQPELPQDIVRTKYFAMPAMTVEDALAQLQLVDHDFYMFRNAATGEINVIYER 179
Query: 23 KEGGY 9
GGY
Sbjct: 180 NHGGY 184
[55][TOP]
>UniRef100_A4CWK2 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CWK2_SYNPV
Length = 195
Score = 116 bits (291), Expect = 1e-24
Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
++ A++ + E K+ R I LV+E DV LS R PR + EVT++
Sbjct: 12 VTPALRDYTETKLDRAIHNFGDLVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RA+E +E Y SIDLV+S + R+LR+ K++ +DH H G K SE P
Sbjct: 65 VIRAQERSENLYASIDLVASKLARQLRRYKDRHSDH-HHSHGH---KASET--PTTEAVL 118
Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
++E + D +E +L VR KYF MPP+T+ +A QL+++DHDFY FR+ ++GE+
Sbjct: 119 DNEAVVESLLDGKEVQLPSPGVRRKYFAMPPMTLEQARQQLDLIDHDFYVFRDSDSGELQ 178
Query: 38 IVYKRKEGGY 9
++Y R GGY
Sbjct: 179 VIYHRNHGGY 188
[56][TOP]
>UniRef100_Q3AZ51 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Synechococcus sp. CC9902 RepID=Q3AZ51_SYNS9
Length = 195
Score = 115 bits (289), Expect = 2e-24
Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
++ A++++ K+ R +RE DV LS R PR + EVT++
Sbjct: 12 ITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE-D 219
V+RA+E +E Y SIDLV + R+LRK KE+ DH H G S + P E
Sbjct: 65 VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HSASLTPSTEEVS 118
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY FR+ +TG++
Sbjct: 119 DESAVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFRDSKTGDLQ 178
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 179 VIYRRNHGGY 188
[57][TOP]
>UniRef100_B5IMZ9 Light repressed protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IMZ9_9CHRO
Length = 195
Score = 115 bits (289), Expect = 2e-24
Identities = 73/193 (37%), Positives = 105/193 (54%), Gaps = 6/193 (3%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR--CEVTLYTKRHG 396
++ A++++ E K+ R I +V+E DV LS R PR + EVT++
Sbjct: 12 VTPAIREYTETKLTRAITHFEGMVKEADVHLSV------ARNPRVPQQIAEVTMFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE----VILPLP 228
V+RA+EH++ Y SIDLV+S + R+L + KE+ H RH +R E LP P
Sbjct: 65 VIRAQEHSDNLYASIDLVASKLTRQLNRYKERV--HERHQGPVHRSARDEEAGAASLPPP 122
Query: 227 SEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 48
D E EL VR KYF MPP+++ EA+ QLE++DHDFY FR E+G
Sbjct: 123 GSSLTD--------GKEPELPSRGVRRKYFAMPPMSLDEALHQLELIDHDFYVFREAESG 174
Query: 47 EINIVYKRKEGGY 9
+I +VY R GG+
Sbjct: 175 QIQVVYHRNHGGF 187
[58][TOP]
>UniRef100_A2BPM8 Light repressed protein A n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BPM8_PROMS
Length = 194
Score = 115 bits (287), Expect = 3e-24
Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++
Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222
V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L P+ S
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL-------PIESM 117
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
+ + ++ E L E ++ KYF+M P++ EA QL+++DHDFY FRN++ E+
Sbjct: 118 ESNFLDKALFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNEL 177
Query: 41 NIVYKRKEGGY 9
++YKR GGY
Sbjct: 178 QVIYKRNHGGY 188
[59][TOP]
>UniRef100_A3ZA02 Light repressed protein A-like protein n=1 Tax=Synechococcus sp.
RS9917 RepID=A3ZA02_9SYNE
Length = 195
Score = 115 bits (287), Expect = 3e-24
Identities = 68/189 (35%), Positives = 109/189 (57%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A++ + + K+ R +Q +V+E DV LS R PR + EVT++
Sbjct: 12 LTPALRDYTQSKLERAVQHFDDMVKEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H +R + P + +
Sbjct: 65 VIRAQERSENLYASIDLVASKLCRQLRRFKERHSDH--HHSNGHRASETP---PTDAIAD 119
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
I+ + E +L + VR KYF MPP+++ EA QL+++DHDFY FR+ TG++ +
Sbjct: 120 AAPIDGSLLDGKEVQLPDPGVRRKYFAMPPMSLEEARHQLDVIDHDFYLFRDASTGDLQV 179
Query: 35 VYKRKEGGY 9
+Y+R GGY
Sbjct: 180 IYRRNHGGY 188
[60][TOP]
>UniRef100_A3PBB8 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9301 RepID=A3PBB8_PROM0
Length = 194
Score = 114 bits (286), Expect = 4e-24
Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++
Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222
V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L P+ S
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL-------PIESM 117
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
+ + ++ E L E ++ KYF+M P++ EA QL+++DHDFY FRN++ E+
Sbjct: 118 ESNFLDKAFFKEGTEASLPEPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNEL 177
Query: 41 NIVYKRKEGGY 9
++YKR GGY
Sbjct: 178 QVIYKRNHGGY 188
[61][TOP]
>UniRef100_A2CBL6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9303 RepID=A2CBL6_PROM3
Length = 195
Score = 114 bits (286), Expect = 4e-24
Identities = 69/191 (36%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A++++ + K+ R IQ +V+E DV LS R P + EVT++
Sbjct: 12 LTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSE 222
V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G + +E ++
Sbjct: 65 VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTEAVI----- 118
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
+E I+ + E L VR KYF MPP++V +A QL+++DHDFY FR +E+G++
Sbjct: 119 -DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARHQLDLIDHDFYLFREQESGQL 177
Query: 41 NIVYKRKEGGY 9
++Y+R GGY
Sbjct: 178 QVIYRRNHGGY 188
[62][TOP]
>UniRef100_A2BV60 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9515 RepID=A2BV60_PROM5
Length = 194
Score = 114 bits (285), Expect = 5e-24
Identities = 67/190 (35%), Positives = 108/190 (56%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++
Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRLSYQTAEVTIFASGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
++RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F+ + +
Sbjct: 65 IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHYKNLNYNLEKNKHSFTN------TNEH 118
Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
D I+ D E +L E ++ KYF+M P+++ EA QL+++DHDFY FRN++ E+
Sbjct: 119 LDSIDKNIFNDKREAKLPEPSIKNKYFEMIPISLEEARKQLDLIDHDFYVFRNKKNNELQ 178
Query: 38 IVYKRKEGGY 9
++YKRK GGY
Sbjct: 179 VIYKRKHGGY 188
[63][TOP]
>UniRef100_Q7V8W0 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
str. MIT 9313 RepID=Q7V8W0_PROMM
Length = 195
Score = 114 bits (284), Expect = 7e-24
Identities = 69/191 (36%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A++++ + K+ R IQ +V+E DV LS R P + EVT++
Sbjct: 12 LTPALREYTQSKLERAIQHFEDMVKEADVHLSV------ARNPSVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKG--PNRLKFSEVILPLPSE 222
V+RA+E +E Y SIDLV+S + R+LR+ KE+ +DH H G + +E ++
Sbjct: 65 VIRAQERSENLYASIDLVASKLCRQLRRYKERHSDH-HHSPGHRASSTPTTEAVI----- 118
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
+E I+ + E L VR KYF MPP++V +A QL+++DHDFY FR +E+G++
Sbjct: 119 -DEAPIDGSLLDGKEAHLPSPGVRRKYFAMPPMSVEQARYQLDLIDHDFYLFREQESGQL 177
Query: 41 NIVYKRKEGGY 9
++Y+R GGY
Sbjct: 178 QVIYRRNHGGY 188
[64][TOP]
>UniRef100_Q1PJW9 Light repressed protein A n=1 Tax=uncultured Prochlorococcus
marinus clone HF10-88F10 RepID=Q1PJW9_PROMA
Length = 194
Score = 113 bits (282), Expect = 1e-23
Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 6/193 (3%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++
Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222
V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H K N+ F PSE
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNNQFK--NKESF-------PSE 115
Query: 221 DEEDEI--EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 48
+ E E + E L E ++ KYF+M P++ EA QL+++DHDFY FRN++
Sbjct: 116 NTESRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNN 175
Query: 47 EINIVYKRKEGGY 9
++ ++YKR GGY
Sbjct: 176 QLQVIYKRNHGGY 188
[65][TOP]
>UniRef100_Q7NMI0 Glr0786 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMI0_GLOVI
Length = 187
Score = 112 bits (281), Expect = 1e-23
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR---CEVTLYTKRH 399
+++ ++ +V K+ +V L VDV LS R PR R EVT+
Sbjct: 12 VTEPIRDYVSSKLDKVFAHFDQLTMGVDVYLSV------ARNPRISRSHSAEVTVQASGT 65
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
++RAEE E Y SIDLV+ + R++RK KE+ + G ++ + LP+ D
Sbjct: 66 -IIRAEEETENLYASIDLVADKLHRQMRKYKERMQKKPKPKTG--LAVANQAPISLPNGD 122
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
E+ L +EVVRTKYF MPP++ EA+D L +VDHDF+ FRN E+GEIN
Sbjct: 123 EK-----------ATALPKEVVRTKYFAMPPMSPEEALDHLALVDHDFFVFRNAESGEIN 171
Query: 38 IVYKRKEGGY 9
++Y R GGY
Sbjct: 172 VLYARNHGGY 181
[66][TOP]
>UniRef100_Q063T8 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. BL107 RepID=Q063T8_9SYNE
Length = 195
Score = 112 bits (280), Expect = 2e-23
Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
++ A++++ K+ R +RE DV LS R PR + EVT++
Sbjct: 12 ITPALREYTNTKLERATSHFGDAIREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE-D 219
V+RA+E +E Y SIDLV + R+LRK KE+ DH H G S + P E
Sbjct: 65 VIRAQERSENLYASIDLVVGKLARQLRKWKERHADH-HHSHG-----HSASLTPSTEEVS 118
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+E +E + E +L E VR KYF MPP+T+ +A QL+++DHDFY F++ TG +
Sbjct: 119 DESVVEGSLVDGKEAQLPEPGVRRKYFSMPPMTLDDARHQLDVIDHDFYLFKDSATGALQ 178
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 179 VIYRRNHGGY 188
[67][TOP]
>UniRef100_Q05SE1 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05SE1_9SYNE
Length = 195
Score = 112 bits (280), Expect = 2e-23
Identities = 65/187 (34%), Positives = 107/187 (57%), Gaps = 3/187 (1%)
Frame = -2
Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHGVVR 387
A++++ E K+ R +Q + +V E DV LS R PR + EVT++ V+R
Sbjct: 15 ALREYTESKLERAVQHYDEMVVEADVHLSV------ARNPRVPQQTAEVTVFANGT-VIR 67
Query: 386 AEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSEDEED 210
A+E +E Y SIDLV++ + R+LR+ KE+ +DH H + +E +L ++
Sbjct: 68 AQERSENLYASIDLVANKLSRQLRRYKERHSDHHHSHGHRASTTPTTEAVL------DDS 121
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
++ + E L + VR KYF MPP++V EA QL+++DHDF+ FR+ + E+ ++Y
Sbjct: 122 AVDGSLLDGKEAHLPDPGVRRKYFPMPPMSVEEARHQLDLIDHDFFLFRDASSKELQVIY 181
Query: 29 KRKEGGY 9
+R GGY
Sbjct: 182 RRNHGGY 188
[68][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N7A9_9CHLO
Length = 245
Score = 112 bits (279), Expect = 3e-23
Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHS-YLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
+++A++ + E K+ + + + VREVDV S R E +G + +VT+YT R+GV
Sbjct: 57 ITEAIRDYCEQKINKAVSHFDMHDVREVDVTCSARS--EKQQGGDLQMTQVTVYT-RNGV 113
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH--GRHMKGPNRLKFSEVILPLPSED 219
VR+EE A+ Y SID VS I+RKLRKIKEK+ G+ P + + ++++ D
Sbjct: 114 VRSEEEADNLYASIDAVSDKIERKLRKIKEKKNSKKAGKTKANP-KAQTADIVAAAAEAD 172
Query: 218 E--EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEET-G 48
E DEIE EE V KY + T EA +++E + H FYAF+N+ G
Sbjct: 173 EARADEIE-----------FEETVGVKYMAVKTSTAMEAAEEMESLGHVFYAFKNKANGG 221
Query: 47 EINIVYKRKEGGY 9
E+N+VYKR GGY
Sbjct: 222 EVNVVYKRDAGGY 234
[69][TOP]
>UniRef100_Q1PKX8 Light repressed protein A-like protein n=1 Tax=uncultured
Prochlorococcus marinus clone ASNC2259
RepID=Q1PKX8_PROMA
Length = 194
Score = 111 bits (278), Expect = 3e-23
Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++
Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222
V+RAEE E Y SIDLVS+ + RKLRK KE+ +T H + K + L P+ S
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKTIHNKQFKNKDSL-------PIESM 117
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
+ + + E L + ++ KYF+M P++ EA QL+++DHDFY FRN++ E+
Sbjct: 118 ESNFLDKAFFIEGTEASLPKPSIKNKYFEMTPISSDEARKQLDLIDHDFYVFRNKKNNEL 177
Query: 41 NIVYKRKEGGY 9
++YKR GGY
Sbjct: 178 QVIYKRNHGGY 188
[70][TOP]
>UniRef100_A8G3B2 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus str.
MIT 9215 RepID=A8G3B2_PROM2
Length = 194
Score = 111 bits (277), Expect = 4e-23
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++
Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F L ++ E
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF------LIADTE 118
Query: 215 EDEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
++ KD E L E ++ KYF+M P++ EA QL+++DHDFY FRN + E+
Sbjct: 119 SRFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNNKNNELQ 178
Query: 38 IVYKRKEGGY 9
++YKR GGY
Sbjct: 179 VIYKRNHGGY 188
[71][TOP]
>UniRef100_B9P0E9 Light repressed protein A n=1 Tax=Prochlorococcus marinus str. MIT
9202 RepID=B9P0E9_PROMA
Length = 194
Score = 111 bits (277), Expect = 4e-23
Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A+K++ E K+ + + +V+E D+ LS + PR + EVT++
Sbjct: 12 LTGALKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RAEE E Y SIDLVS+ + RKLRK KE+ + + N+ F P+ +
Sbjct: 65 VIRAEEKTENLYSSIDLVSNKLCRKLRKYKERNNKIFHNNQFKNKESF-----PIADTES 119
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
E + E L E ++ KYF+M P++ EA QL+++DHDFY FRN + E+ +
Sbjct: 120 RFLDEALLKDGIEASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNSKNNELQV 179
Query: 35 VYKRKEGGY 9
+YKR GGY
Sbjct: 180 IYKRNHGGY 188
[72][TOP]
>UniRef100_Q7V2R9 Light repressed protein A homolog n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2R9_PROMP
Length = 194
Score = 110 bits (274), Expect = 1e-22
Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ +K++ E K+ + + +V+E D+ LS + PR + EVT++
Sbjct: 12 LTGPLKEYTEAKIEKATHHYKDIVKEADIHLSIE------KNPRVSFQTAEVTIFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
++RAEE E Y SIDLVS+ + RKLRK KE+ + N+ +S I +E
Sbjct: 65 IIRAEEKTENLYSSIDLVSNKLCRKLRKYKERHNKKLHNNLVKNKNSYSNAI------EE 118
Query: 215 EDEIEITPQKDDEE-ELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
D I+ ++ E L E ++ KYF+M P+++ EA QL+ +DHDFY FRN+ E+
Sbjct: 119 SDSIDKDIFNEEREVRLPEPSIKKKYFEMIPISLEEARKQLDFIDHDFYLFRNKLNNELQ 178
Query: 38 IVYKRKEGGY 9
++YKR GGY
Sbjct: 179 VIYKRNHGGY 188
[73][TOP]
>UniRef100_Q7U8F3 Light repressed protein A homolog n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U8F3_SYNPX
Length = 195
Score = 109 bits (272), Expect = 2e-22
Identities = 63/190 (33%), Positives = 108/190 (56%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
++ A++ + + K+ R VRE DV LS R PR + EVT++
Sbjct: 12 ITPALRDYTQTKLERATHHFGNAVREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSED 219
V+RA+E +E Y SIDL +S + R+LR+ KE+ +DH H + +E +
Sbjct: 65 VIRAQERSENLYASIDLAASKLARQLRRWKERHSDHHHSHGHSASTTPATEAVT------ 118
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
++ +++ + + E EL + VR KYF MPP+++ EA QL+++DHDFY FR++++ ++
Sbjct: 119 DDSQVDGSLLQGREAELPDPGVRRKYFAMPPMSLEEARRQLDLIDHDFYLFRDKDSDQLQ 178
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 179 VIYRRNHGGY 188
[74][TOP]
>UniRef100_Q31CD8 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q31CD8_PROM9
Length = 194
Score = 109 bits (272), Expect = 2e-22
Identities = 65/187 (34%), Positives = 101/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+ A+K++ + K+ + + +V+E D+ LS E + EVT++ V+
Sbjct: 12 LTGALKEYTQAKIEKATHHYKDIVKEADIHLSI----EKNPSVSLQTAEVTIFANGT-VI 66
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE E Y SIDLVS+ + RKLRK KE+ + N F P+ S D
Sbjct: 67 RAEEKTENLYSSIDLVSNKLCRKLRKYKERNYKTNYINQFKNNESF-----PIESADSNV 121
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ ++ E L E ++ KYF+M P++ EA QL+++DHDFY FRN++ E+ ++Y
Sbjct: 122 LDKTLFKQGREASLPEPSIKNKYFEMNPISSEEARKQLDLIDHDFYVFRNKKNNELQVIY 181
Query: 29 KRKEGGY 9
KR GGY
Sbjct: 182 KRNHGGY 188
[75][TOP]
>UniRef100_A3YVD7 Light repressed protein A-like protein n=1 Tax=Synechococcus sp. WH
5701 RepID=A3YVD7_9SYNE
Length = 195
Score = 108 bits (271), Expect = 2e-22
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 6/193 (3%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR--CEVTLYTKRHG 396
++ A++ + E K+GR I + LV+E DV LS R PR + EVT++
Sbjct: 12 VTPAIRDYTEAKLGRAINHYEGLVKEADVHLSV------ARNPRVAQQTAEVTVFANGV- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RA+E +E Y SID+V+ + R+LR+ K++ ++H N + + E
Sbjct: 65 VIRAQERSENLYASIDMVAGKLSRQLRRYKDRLSNHHGAGSPAN----------VGDDTE 114
Query: 215 EDEIE-ITPQK---DDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETG 48
+ +E + P D E L VR KYF MP +++ +A+ QLE++DHDFY FR E +G
Sbjct: 115 QPSLEGVLPNDLIGDREPALPVPAVRRKYFSMPAMSLDQALHQLELIDHDFYVFREESSG 174
Query: 47 EINIVYKRKEGGY 9
+ +VY+R GG+
Sbjct: 175 GLQVVYRRNHGGF 187
[76][TOP]
>UniRef100_Q3AI28 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Synechococcus sp. CC9605 RepID=Q3AI28_SYNSC
Length = 195
Score = 108 bits (270), Expect = 3e-22
Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
++ A++ + + K+ R VRE DV LS R PR + EVT++
Sbjct: 12 ITPALRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSED 219
V+RA+E +E Y SIDL + + R+LR+ KE+ +DH H + ++V+ +
Sbjct: 65 VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDVV------N 118
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+ +E + + E EL + VR KYF MPP+ + EA QL+++DHDFY FR +E+ ++
Sbjct: 119 DASPVEASLLQGREAELPDPGVRRKYFAMPPMGLEEARRQLDLIDHDFYLFREKESDQLQ 178
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 179 VIYRRNHGGY 188
[77][TOP]
>UniRef100_A2C0K6 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. NATL1A RepID=A2C0K6_PROM1
Length = 194
Score = 107 bits (268), Expect = 5e-22
Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ +++ + + K+ + +V+E DV LS R PR + EVT++
Sbjct: 12 LTPSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RA+E +E Y SIDLV++ + R+LRK KE+ H H + +E I S D
Sbjct: 65 VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHNNQSTKSVQNEKIENFSSSDH 124
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
+ + E L VR KYF+M P+T+ +A QL+++DHDFY FR EE + +
Sbjct: 125 ------SLIEGKEPHLPNPGVRRKYFEMDPMTIEQARVQLDLIDHDFYLFREEEGSALRV 178
Query: 35 VYKRKEGGY 9
+Y+R GGY
Sbjct: 179 IYRRNHGGY 187
[78][TOP]
>UniRef100_Q46H11 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Prochlorococcus marinus str. NATL2A
RepID=Q46H11_PROMT
Length = 194
Score = 107 bits (266), Expect = 8e-22
Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ +++ + + K+ + +V+E DV LS R PR + EVT++
Sbjct: 12 LTQSLRDYTKTKIDKATHNFQEMVQEADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RA+E +E Y SIDLV++ + R+LRK KE+ H H + +E S D
Sbjct: 65 VIRAQERSENLYASIDLVANKLARQLRKYKERHNSHNVHHNQSTKSVQNEDTQNFSSSDH 124
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
+T K E L VR KYF+M P+ + +A QL+++DHDFY FR EE + +
Sbjct: 125 S----LTEGK--EPHLPSPGVRRKYFEMTPMNIEQARVQLDLIDHDFYLFREEEGSALRV 178
Query: 35 VYKRKEGGY 9
+YKR GGY
Sbjct: 179 IYKRNHGGY 187
[79][TOP]
>UniRef100_C2D8Z3 Possible ribosome-associated inhibitor A n=1 Tax=Atopobium vaginae
DSM 15829 RepID=C2D8Z3_9ACTN
Length = 192
Score = 107 bits (266), Expect = 8e-22
Identities = 67/187 (35%), Positives = 93/187 (49%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+SDA++ HV+ KVG ++ DV L P + CEVT+Y R+ VV
Sbjct: 13 VSDALRDHVQHKVGDALKVFDITPMSCDVVLRVDKNHS---NPDRKTCEVTVYV-RNNVV 68
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R E +E Y +ID S + R+LRK K + D + + P P PS+D D
Sbjct: 69 RVEASSEDMYAAIDAASDKVTRQLRKYKTRIIDRKQRSQAP---------APAPSKDLSD 119
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
I+ D +VR KY D+ P+T EA+ Q +++ HDFY F N TG IN+VY
Sbjct: 120 LIDEVADDD-------MLVREKYIDLHPMTEEEALVQTDLIGHDFYVFENATTGLINVVY 172
Query: 29 KRKEGGY 9
R GGY
Sbjct: 173 HRHNGGY 179
[80][TOP]
>UniRef100_Q7VDH9 Ribosome-associated protein Y n=1 Tax=Prochlorococcus marinus
RepID=Q7VDH9_PROMA
Length = 195
Score = 106 bits (265), Expect = 1e-21
Identities = 65/190 (34%), Positives = 109/190 (57%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
L+ A++++ + K+ + I +V+E DV LS + PR + EVT++
Sbjct: 12 LTPALREYTKSKLEKAIHHFGDMVKEADVHLSV------AKNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RA+E ++ Y SIDLVS+ + R+LR+ KE+ +DH H +R I P E
Sbjct: 65 VIRAQERSQNLYASIDLVSNKLCRQLRRYKERHSDH--HHSPGHRAS----ITPTTEEVL 118
Query: 215 EDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
ED+ I + + E +L + +R KYF M P+ + +A QL+++DHDFY F+ E+ ++
Sbjct: 119 EDKSINGSLVEGKEAKLPKPGIRRKYFPMHPMNIEQAQHQLDLIDHDFYLFKEAESEQLQ 178
Query: 38 IVYKRKEGGY 9
++Y+RK GGY
Sbjct: 179 VIYRRKNGGY 188
[81][TOP]
>UniRef100_D0CH01 Sigma 54 modulation protein n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CH01_9SYNE
Length = 195
Score = 105 bits (263), Expect = 2e-21
Identities = 62/190 (32%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRT--RRCEVTLYTKRHG 396
++ +++ + + K+ R VRE DV LS R PR + EVT++
Sbjct: 12 ITPSLRDYTQTKLERATSHFGDAVREADVHLSV------ARNPRVPQQTAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLKFSEVILPLPSED 219
V+RA+E +E Y SIDL + + R+LR+ KE+ +DH H + ++V+ +
Sbjct: 65 VIRAQERSENLYASIDLAAGKLARQLRRWKERHSDHHHSHGHSASHTPSTDVV------N 118
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+ +E + + E EL + VR KYF MPP+ + +A QL+++DHDFY FR +E+ ++
Sbjct: 119 DASPVESSLLQGREAELPDPGVRRKYFAMPPMGLEDARRQLDLIDHDFYLFREKESDQLQ 178
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 179 VIYRRNHGGY 188
[82][TOP]
>UniRef100_A9BE19 Light repressed protein A-like protein n=1 Tax=Prochlorococcus
marinus str. MIT 9211 RepID=A9BE19_PROM4
Length = 197
Score = 103 bits (257), Expect = 9e-21
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRR--CEVTLYTKRHG 396
L+ +++++ + K+ + I +V+E DV LS + P + EVT++
Sbjct: 12 LTPSLREYTQSKLEKAIHHFDGIVQEADVHLS------IAKNPSVPQQIAEVTVFANGT- 64
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RA+E ++ Y SIDLV++ + R+LRK KE+ +DH H G S + P
Sbjct: 65 VIRAQERSQNLYASIDLVATKLCRQLRKYKERHSDH-HHSHG-----HSASLTPTTEAVV 118
Query: 215 EDE-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
ED+ I+ + + E L +R KYF MPP++ +A QL+++DHDFY F+ ET ++
Sbjct: 119 EDKAIDSSLIQGKEAHLPTPGIRRKYFSMPPMSTEQARHQLDLIDHDFYMFKEIETQQLQ 178
Query: 38 IVYKRKEGGY 9
++Y+R GGY
Sbjct: 179 VIYRRTHGGY 188
[83][TOP]
>UniRef100_C8W7H2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Atopobium parvulum DSM 20469 RepID=C8W7H2_ATOPD
Length = 196
Score = 102 bits (253), Expect = 3e-20
Identities = 64/187 (34%), Positives = 97/187 (51%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+S+A++ HV+ K+G ++ DV L P + EVT++ R+ VV
Sbjct: 13 ISEALRAHVDQKIGDALKVFDITPMSCDVVLRVDKNPS---NPDRKTTEVTVFV-RNNVV 68
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R ++ Y +ID + + R+LRK K K + HMK SE + L ED +
Sbjct: 69 RVTASSDDMYAAIDEAADKVSRQLRKYKTKVVERRHHMK-------SERGIALTQEDLAN 121
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
IEI E+L +++VR KY D+ P+T EA+ Q +++ HDFY F N TG N++Y
Sbjct: 122 LIEIPA-----EDLDDQLVREKYVDLEPMTEEEALVQTDLLGHDFYVFVNSSTGLTNVIY 176
Query: 29 KRKEGGY 9
RK GGY
Sbjct: 177 HRKNGGY 183
[84][TOP]
>UniRef100_Q1IYK5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus geothermalis DSM 11300
RepID=Q1IYK5_DEIGD
Length = 186
Score = 101 bits (251), Expect = 5e-20
Identities = 64/187 (34%), Positives = 101/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ +VE+K+ R + + S + + V L+ R + GR R EV L +G++
Sbjct: 13 VTDAMRDYVEEKLTR-LDRFSDQITDARVVLTVRDVRDAGR---RNRVEVQLNVP-NGII 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEEH Y +ID S +++R+LRK K K H + P P P E D
Sbjct: 68 RAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPP----------PQPGLAEAD 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
D+ E E+VRTK FD+ P++ +A+ Q+E + HDFY F+N +TG +VY
Sbjct: 118 ----VNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVFKNMDTGGCAVVY 173
Query: 29 KRKEGGY 9
+R++G Y
Sbjct: 174 RRRDGHY 180
[85][TOP]
>UniRef100_C1CWW9 Putative sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Deinococcus deserti VCD115 RepID=C1CWW9_DEIDV
Length = 188
Score = 99.0 bits (245), Expect = 2e-19
Identities = 63/187 (33%), Positives = 102/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+SDA++ +V++K+ R + +++ + + V L+ R + GR R EV L +G++
Sbjct: 13 VSDAMRDYVQEKLTR-LDRYNDQITDARVTLTVRDVRDAGR---RNRVEVQLNVP-NGII 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEEH Y +ID S +++R+LRK K R+MK + V P P E D
Sbjct: 68 RAEEHHSDMYAAIDKASDVLERQLRKFKT------RYMKQ----RHETVPQPGPGPAEAD 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ DD E + E+VR K FDM P++ +A+ Q+E + HDFY F N + +VY
Sbjct: 118 ---VNAGLDDVSEFMPEIVRQKRFDMRPMSPEDAVTQMEALGHDFYVFMNMGSNACGVVY 174
Query: 29 KRKEGGY 9
+R++G Y
Sbjct: 175 RRRDGHY 181
[86][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0A7Y1_9CLOT
Length = 187
Score = 97.8 bits (242), Expect = 5e-19
Identities = 67/187 (35%), Positives = 102/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D +K VEDK+ + + ++ + EV V +S R + + EVT+ ++
Sbjct: 18 LTDGIKGAVEDKLSK-LDRYLHEDTEVKVTVSARKAKQ--------KIEVTIIPINGPII 68
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ E Y +ID+V + ++LR+ K K +KG + K E I ED
Sbjct: 69 RAEDSEENLYAAIDVVYDKLNKQLRRYKNK-------LKGKYQSKGQESIRFQNIEDNAA 121
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E KD E +++ E R K FDM P++ EA+ Q+E+V HDFY FRN +T EI+IVY
Sbjct: 122 E-----DKDGEFDIVIE--RHKKFDMKPMSPEEAVLQMELVGHDFYMFRNIDTDEISIVY 174
Query: 29 KRKEGGY 9
+R+ GGY
Sbjct: 175 RRETGGY 181
[87][TOP]
>UniRef100_C8WMZ8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Eggerthella lenta DSM 2243 RepID=C8WMZ8_9ACTN
Length = 191
Score = 97.4 bits (241), Expect = 7e-19
Identities = 61/189 (32%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
++DA++++ E+K+G ++ LV E+ + + PR CEVTL TK H
Sbjct: 12 VTDALREYAEEKIGNSMKVMDIDPLVAEIVLFVEKNPAN-----PRPAVCEVTLRTKGH- 65
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
++R EEH E Y +ID+ ++ + R+LRK K K D R ++ + E I PS
Sbjct: 66 IIRVEEHEEDMYAAIDVAAAKVVRQLRKYKTKVVD--RKLRAAD-----ETIRIEPSAAG 118
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
E +++ Q+ ++E VVR K + PLT EA+ +++++ HDF+A+ + ++G +N+
Sbjct: 119 ELDVDGLMQELSDDE----VVRVKTIEFEPLTEEEALVKIDLLGHDFFAYTDRDSGLVNV 174
Query: 35 VYKRKEGGY 9
+Y+R +GGY
Sbjct: 175 LYRRDDGGY 183
[88][TOP]
>UniRef100_B6FVY1 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6FVY1_9CLOT
Length = 194
Score = 95.1 bits (235), Expect = 3e-18
Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+ +K ++E K+ ++ Y+ + DV+++ + GR + EVT+ K V+
Sbjct: 20 LTQGIKDNIESKLSKL---DKYISPDTDVKVTV--SAKKGR----HKIEVTIAPKNGHVI 70
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGP--NRLKFSEVILPLPSEDE 216
RAEE E Y +IDLV ++ +L+K K+K + K + + ++ IL ED
Sbjct: 71 RAEESQENLYPAIDLVVDKLKIQLKKYKDKMQKRHQENKSIRFDSPEINDSILEEDLEDF 130
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
EDE+ I + R K ++ P++ EA+ Q+E+V HDFY FRN+ET EI +
Sbjct: 131 EDELFI-------------IKRRKRINIKPMSEEEAVLQMELVGHDFYIFRNDETDEIAL 177
Query: 35 VYKRKEGGY 9
VYKRK GGY
Sbjct: 178 VYKRKNGGY 186
[89][TOP]
>UniRef100_C4G2X0 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4G2X0_ABIDE
Length = 175
Score = 94.7 bits (234), Expect = 4e-18
Identities = 59/187 (31%), Positives = 100/187 (53%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++D ++ +E+K+G++ Y + +V ++ + + ++ EVT+ K H ++
Sbjct: 12 VTDGLRNAIEEKLGKL---EHYFTPDTEVHVTLKVEKD------RQKVEVTVPVKGH-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ Y SIDL+ II+R+LR+ K K D + F+ +
Sbjct: 62 RAEQVSDDMYVSIDLIEDIIERQLRRYKTKIVDSKQSASN-----FTSAFM--------- 107
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
Q DD E+ +V+RTK F + P+ EA Q+E+++H FY FRN ET E+N+VY
Sbjct: 108 ------QDDDYEDEDVKVIRTKRFAVKPMDPEEACVQMELLNHSFYVFRNAETDEVNVVY 161
Query: 29 KRKEGGY 9
KRK G Y
Sbjct: 162 KRKNGDY 168
[90][TOP]
>UniRef100_B0P2P9 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1
RepID=B0P2P9_9CLOT
Length = 179
Score = 94.7 bits (234), Expect = 4e-18
Identities = 65/189 (34%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
+++ +K +E+K+GR+ YLV + V+V LS + G + + EVT+ K H
Sbjct: 15 VTEGIKAAIEEKLGRL---DKYLVDDTIVNVTLSVQKGRQ--------KIEVTIPMKGH- 62
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
++RAEE +E Y SIDLV +I+R++R+ K + + K+ ++
Sbjct: 63 IIRAEEGSEDMYVSIDLVVDVIERQIRRYKTRLMNQ----------KYDGTSFKQEFMEQ 112
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
ED++E DDE +I R+K F + P+ V EA Q+E++ HDF+ FRN +T E+N+
Sbjct: 113 EDDVE-----DDEIRII----RSKKFAIKPMDVEEACVQMELLGHDFFVFRNADTFEVNV 163
Query: 35 VYKRKEGGY 9
VYKRK Y
Sbjct: 164 VYKRKGNTY 172
[91][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F5F53
Length = 183
Score = 94.4 bits (233), Expect = 6e-18
Identities = 58/187 (31%), Positives = 105/187 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+DA+K +E K+ ++ +Y+ + DV+++ R R ++ EVT+ T ++
Sbjct: 12 LTDAIKNKIESKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIEVTIATVNGPII 62
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ E Y +ID+V + ++L+K K++ D + K ++F + + L E E+
Sbjct: 63 RAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDAEINLADEQED- 118
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+N ++ EI +VY
Sbjct: 119 ------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVY 170
Query: 29 KRKEGGY 9
KR GGY
Sbjct: 171 KRNNGGY 177
[92][TOP]
>UniRef100_A4ECY7 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
ATCC 25986 RepID=A4ECY7_9ACTN
Length = 194
Score = 94.4 bits (233), Expect = 6e-18
Identities = 62/187 (33%), Positives = 92/187 (49%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ HV++K+G ++ VDV L P EVT R V+
Sbjct: 12 VTDALRAHVDEKIGEALKVFDIEPMTVDVVLRYEKNPS---NPNPAIVEVTARA-RGSVI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R EH Y +IDL + + R+LRK K K D NR + P E ED
Sbjct: 68 RVAEHGADMYAAIDLSADKVTRQLRKFKTKVVD--------NRQGGASAADVAPVERVED 119
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
++ ++D++ L+ E K D+ P+T +A+ Q +++ HDFY F N TG IN+VY
Sbjct: 120 LADLLLPEEDDDLLVRE----KVIDVTPMTEEQALVQTDLLGHDFYVFENATTGLINVVY 175
Query: 29 KRKEGGY 9
RK GGY
Sbjct: 176 HRKNGGY 182
[93][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
RepID=Q18CN1_CLOD6
Length = 183
Score = 94.0 bits (232), Expect = 7e-18
Identities = 58/187 (31%), Positives = 105/187 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+DA+K +E K+ ++ +Y+ + DV+++ R R ++ EVT+ T ++
Sbjct: 12 LTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIEVTIATVNGPII 62
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ E Y +ID+V + ++L+K K++ D + K ++F + + L E E+
Sbjct: 63 RAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDAEINLADEQED- 118
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+N ++ EI +VY
Sbjct: 119 ------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVY 170
Query: 29 KRKEGGY 9
KR GGY
Sbjct: 171 KRNNGGY 177
[94][TOP]
>UniRef100_C4V4X1 Ribosome-associated inhibitor A n=1 Tax=Selenomonas flueggei ATCC
43531 RepID=C4V4X1_9FIRM
Length = 181
Score = 94.0 bits (232), Expect = 7e-18
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++ +VE +VG+ I K+ V E+ V LS G + + EVT R ++
Sbjct: 13 VTPALRDYVEKRVGK-ITKYFDNVGEIAVLLSVEG--------KHHKVEVTAPVARGILL 63
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSEDEE 213
R EEH+E Y SIDLV ++R++RK K K R +G + + E P+P EDE
Sbjct: 64 RGEEHSEDMYSSIDLVIEKLERQIRKQKTKLAR--RFRQGGFKAEAVETFAQPIPEEDE- 120
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+ VV+TK F + P+ V EAI Q+ +++H F+ FRN E+ E+NIV
Sbjct: 121 ---------------LYPVVKTKRFTLQPMDVQEAIMQMNLLNHHFFVFRNAESEEVNIV 165
Query: 32 YKRKEGGY 9
Y R +G Y
Sbjct: 166 YGRHDGKY 173
[95][TOP]
>UniRef100_B9CNR8 Light-repressed protein n=1 Tax=Atopobium rimae ATCC 49626
RepID=B9CNR8_9ACTN
Length = 195
Score = 93.6 bits (231), Expect = 9e-18
Identities = 61/187 (32%), Positives = 95/187 (50%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+SDA++ HVE+K+G ++ DV L + EVT++ R+ VV
Sbjct: 13 VSDALRSHVEEKIGDALKVFDIQPMTCDVVLRVDKNPS---NLERKSVEVTVFV-RNSVV 68
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R + YG+ID + + R+LRK K + D H + S+ E+ +
Sbjct: 69 RVVSSGDDMYGAIDEAAEKVTRQLRKYKTRIVDKHHHAQNTRGRALSQ-------EELAN 121
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
IE TP +D +++L+ E KY D+ P+T EA+ Q +++ HDFY F N TG N++Y
Sbjct: 122 LIE-TPAEDLDDQLVRE----KYIDLLPMTEEEALVQTDLLGHDFYVFVNSTTGLTNVIY 176
Query: 29 KRKEGGY 9
RK GGY
Sbjct: 177 HRKNGGY 183
[96][TOP]
>UniRef100_B9I261 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I261_POPTR
Length = 118
Score = 93.6 bits (231), Expect = 9e-18
Identities = 50/90 (55%), Positives = 62/90 (68%)
Frame = -2
Query: 323 KLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTK 144
KLRKIK+KE+DHGRHMKG N+LK E P+ E E ++ +KDD+ ++E V TK
Sbjct: 28 KLRKIKDKESDHGRHMKGFNKLKVRE---PMSQEVENVADTVSQRKDDDN--LDEAVHTK 82
Query: 143 YFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54
YFDMPPLTV EAI +L VDH FY F + E
Sbjct: 83 YFDMPPLTVHEAIVRLGNVDHAFYGFGHAE 112
[97][TOP]
>UniRef100_B8BRE6 Light-repressed protein a n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BRE6_THAPS
Length = 198
Score = 93.6 bits (231), Expect = 9e-18
Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVT--LYTKRHG 396
L+ A+ +V K+ + + K V DV L+ + P+ + + T +
Sbjct: 16 LTPALSDYVNSKIEKTVGKLPLAVSHCDVYLTVN------KNPKVKDAHTAEVVTTLKGT 69
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSEVILPLPSE 222
R E + Y SIDLV++ + RKLRK KE+ D HG G N +EV+ + +
Sbjct: 70 TFRVAESSPDMYASIDLVAARLARKLRKYKERRLDGYHGGPNMGEN---IAEVLNAIEVD 126
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
+ ED E D ++ ++ +V T P+++ EAI L+ +DHDFY FR+EET E+
Sbjct: 127 ESEDGAEEESYIDPDQAVVTKVKST------PISIKEAIFALDYIDHDFYVFRDEETNEV 180
Query: 41 NIVYKRKEGG 12
++VYKR GG
Sbjct: 181 SVVYKRNAGG 190
[98][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
ATCC 43255 RepID=UPI00017F5ACC
Length = 185
Score = 93.2 bits (230), Expect = 1e-17
Identities = 62/187 (33%), Positives = 102/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D +K +V+ K+ R+ YL E +V+++ + ++ EVT+ ++
Sbjct: 12 LTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVEVTIIPINGQII 62
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ + Y +ID+V + R++ K K K D ++ K ++F L D
Sbjct: 63 RAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN----LDFIDNSS 115
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E + ++DE +IE R K F++ P++ EAI Q+E+V H+FY FRN++ EINIVY
Sbjct: 116 EFDDYDDEEDENIVIE---RRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVY 172
Query: 29 KRKEGGY 9
KRK GGY
Sbjct: 173 KRKAGGY 179
[99][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
RepID=C9XIR4_CLODI
Length = 183
Score = 93.2 bits (230), Expect = 1e-17
Identities = 58/187 (31%), Positives = 105/187 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+DA+K +E K+ ++ +Y+ + DV+++ R R ++ EVT+ T ++
Sbjct: 12 LTDAIKNKIETKLSKL---DNYIHPDTDVKVTVSA-----RKAR-QKIEVTIATVNGPII 62
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ E Y +ID+V + ++L+K K++ D + K ++F + + L E E+
Sbjct: 63 RAEDMQENLYTAIDVVYDKLSKQLKKYKKRLQDKHKDNKS---IRFQDSEINLADEQED- 118
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
D+ +EL+ + R K F + P++ EA+ Q+E++ HDFY F+N ++ EI +VY
Sbjct: 119 ------YGDENQELV--IQRRKKFSVKPMSEEEAVLQMELIGHDFYMFKNIDSDEIAVVY 170
Query: 29 KRKEGGY 9
KR GGY
Sbjct: 171 KRNNGGY 177
[100][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
RepID=C9XLM7_CLODI
Length = 187
Score = 93.2 bits (230), Expect = 1e-17
Identities = 61/187 (32%), Positives = 104/187 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D +K +V+ K+ R+ YL E +V+++ + ++ EVT+ ++
Sbjct: 12 LTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVEVTIIPINGQII 62
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ + Y +ID+V + R++ K K K D ++ K ++F + + + E D
Sbjct: 63 RAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENLDF-IDNSSEFD 118
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ + DDEE+ + R K F++ P++ EAI Q+E+V H+FY FRN++ EINIVY
Sbjct: 119 DYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVY 174
Query: 29 KRKEGGY 9
KRK GGY
Sbjct: 175 KRKAGGY 181
[101][TOP]
>UniRef100_C4FCG3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis
DSM 13280 RepID=C4FCG3_9ACTN
Length = 194
Score = 93.2 bits (230), Expect = 1e-17
Identities = 60/187 (32%), Positives = 95/187 (50%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ HV++K+G ++ DV L P EVT+ R V+
Sbjct: 12 VTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVEVTVRA-RGSVI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R EH Y +IDL + + R+LRK K + D+ + L +EV P E D
Sbjct: 68 RVAEHGADMYAAIDLAAEKVTRQLRKFKTRVVDNRQQ-----GLSAAEVA---PVEPVAD 119
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
++ +D++++L VR K ++ P+T EA+ Q +++ HDFY F N TG +N+VY
Sbjct: 120 LADLLLPEDEDDQL----VRVKEVELTPMTDEEALVQTDLIGHDFYVFENSVTGLVNVVY 175
Query: 29 KRKEGGY 9
RK GGY
Sbjct: 176 HRKNGGY 182
[102][TOP]
>UniRef100_A9KS11 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Clostridium phytofermentans ISDg RepID=A9KS11_CLOPH
Length = 178
Score = 92.8 bits (229), Expect = 2e-17
Identities = 62/187 (33%), Positives = 98/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++ +K + +K+G+ ++K+ E+ V LS + + EVT+ K + +V
Sbjct: 12 VTEGLKSAIYEKIGK-LEKYFNPEAEIHVTLSVEKDRQ--------KIEVTIPMKGN-IV 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ + Y SIDLV +I+R+L+K K K D + N F +V L + +E+
Sbjct: 62 RAEQVSNDMYASIDLVEEVIERQLKKYKSKLKDMNQSAANFNPSFFEDV---LNEDSDEE 118
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+I IT R K F M P+ EA Q+E++ H+FY FRN ET E+N+VY
Sbjct: 119 DINIT--------------RVKRFAMKPMDAEEACVQMELLGHNFYVFRNAETDEVNVVY 164
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 165 KRKGNSY 171
[103][TOP]
>UniRef100_A7NNI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Roseiflexus castenholzii DSM 13941
RepID=A7NNI5_ROSCS
Length = 198
Score = 92.8 bits (229), Expect = 2e-17
Identities = 59/187 (31%), Positives = 98/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
LSD +QH+E K+ R+ + YL R V + G R +VT+ +V
Sbjct: 17 LSDRQRQHIEQKLSRLDR---YLDRIDKVTVEHMEEMRRNEG-NVHRVQVTVVGDHGVLV 72
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE A Y +ID V +QR++ + K+K GR R + +++ LP +
Sbjct: 73 RAERRAPELYAAIDEVYDTLQRQIERYKDKHWRRGRL-----RRQGGQIVEALPEMNAA- 126
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
P DEEE +VRTK F + P+ EA++Q+E++ H F+ F++ +TG++N++Y
Sbjct: 127 ----APAPIDEEEQRPRIVRTKEFQVKPMYSDEAVEQMELLGHSFFIFQDADTGKLNVLY 182
Query: 29 KRKEGGY 9
+R++G Y
Sbjct: 183 RRQDGNY 189
[104][TOP]
>UniRef100_C2KX79 Ribosome-associated inhibitor A n=1 Tax=Oribacterium sinus F0268
RepID=C2KX79_9FIRM
Length = 176
Score = 92.4 bits (228), Expect = 2e-17
Identities = 64/187 (34%), Positives = 98/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D +K VE K+G+ + K +V LST+ ++ EVT+ K V+
Sbjct: 12 LTDGLKNGVEKKLGK-LDKFFQAETPCNVTLSTQKD--------MQKIEVTIPVKG-SVI 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE Y SIDLV +++R++RK K K RH S+ +
Sbjct: 62 RAEEATPDMYQSIDLVVDVLERQIRKYKNKLIQ--RHQAA--------------SDFSSE 105
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
IE P +D+EE ++VRTK+ D+ P+T EA Q+E++ H F+ F++ TG++N+VY
Sbjct: 106 FIEEKPAQDEEEI---KIVRTKHIDLKPMTAEEACLQMELLGHSFFVFQDGNTGKVNVVY 162
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 163 KRKANSY 169
[105][TOP]
>UniRef100_B6G8G1 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
13279 RepID=B6G8G1_9ACTN
Length = 194
Score = 92.4 bits (228), Expect = 2e-17
Identities = 60/187 (32%), Positives = 95/187 (50%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ HV++K+G ++ DV L P EVT+ R V+
Sbjct: 12 VTDALRAHVDEKIGEALKVFDIEPMTADVVLRYEKNPS---NPNPAIVEVTVRA-RGSVI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R EH Y +IDL + + R+LRK K + D+ + L +EV P D D
Sbjct: 68 RVAEHGADMYAAIDLAADKVTRQLRKFKTRVVDNRQQ-----GLSAAEVAPVEPVADLAD 122
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ P+++D++ +VR K ++ P+T +A+ Q +++ HDFY F N TG IN+VY
Sbjct: 123 LL--IPEEEDDQ-----LVRVKEIELTPMTEEQALVQTDLLGHDFYVFENSTTGLINVVY 175
Query: 29 KRKEGGY 9
RK GGY
Sbjct: 176 HRKNGGY 182
[106][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F60C6
Length = 185
Score = 91.7 bits (226), Expect = 4e-17
Identities = 62/187 (33%), Positives = 101/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D +K +V+ K+ R+ YL E +V+++ + ++ EVT+ ++
Sbjct: 12 LTDGIKGYVDGKLSRL---EKYLDPESEVKVTVSAKKD------RQKVEVTIIPINGQII 62
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ + Y +ID+V + R++ K K K D ++ K ++F V S + +D
Sbjct: 63 RAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFENVDFIDNSSEFDD 119
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
DDEE + R K F++ P++ EAI Q+E+V H+FY FRN++ EINIVY
Sbjct: 120 Y-------DDEEYENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVY 172
Query: 29 KRKEGGY 9
KRK GGY
Sbjct: 173 KRKAGGY 179
[107][TOP]
>UniRef100_Q7XYJ6 Ribosomal protein rpS22 (Fragment) n=1 Tax=Bigelowiella natans
RepID=Q7XYJ6_BIGNA
Length = 170
Score = 91.7 bits (226), Expect = 4e-17
Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 13/153 (8%)
Frame = -2
Query: 431 RCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKF 252
+ EVT+Y K V+R + + Y SIDLV+ ++ RKLRK KE++ G+ R +
Sbjct: 15 KIEVTVYVKDSKVIRGSVSSVSEYSSIDLVTDLVNRKLRKYKERK--EGKRTASGVRTFY 72
Query: 251 SEVILPLPSEDEEDEIEITPQKDD--EEEL---------IEEV--VRTKYFDMPPLTVFE 111
+ I S+ + E +DD +EE +E+V VR K F MPP+++ +
Sbjct: 73 TNDI----SDSSDVEGAAVQGQDDVQQEEYSGIPEGYAPVEDVSVVRRKKFPMPPISIED 128
Query: 110 AIDQLEMVDHDFYAFRNEETGEINIVYKRKEGG 12
A L+ +DHDFY FRN ET EIN+VY+R EGG
Sbjct: 129 ATLCLDYLDHDFYVFRNSETKEINVVYRRAEGG 161
[108][TOP]
>UniRef100_Q9RVE7 Protein DR_1082 n=1 Tax=Deinococcus radiodurans RepID=UA82_DEIRA
Length = 191
Score = 91.7 bits (226), Expect = 4e-17
Identities = 59/187 (31%), Positives = 104/187 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++ ++++VE+K+ R + +++ + + V L+ R + R R EV L G++
Sbjct: 13 VTEPMREYVEEKLSR-LDRYTDQITDARVTLTVR---DVRNNERRNRVEVQLNVPG-GII 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEEH Y +ID S +++R+LRK K R+MK R + LP P+E E +
Sbjct: 68 RAEEHHADMYAAIDKASDVLERQLRKFKT------RYMK--QRQEGRPEPLPGPAEAEVN 119
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
DD E E+VR K F++ P++ +A+ Q+E + HDFY F++ + G+ +VY
Sbjct: 120 AQGSGAAMDDVSEFHPEIVRQKRFELRPMSAEDAVVQMEALGHDFYVFQDLQ-GQTGVVY 178
Query: 29 KRKEGGY 9
+R++G Y
Sbjct: 179 RRRDGHY 185
[109][TOP]
>UniRef100_Q5KV92 Ribosomal protein S30EA n=1 Tax=Geobacillus kaustophilus
RepID=Q5KV92_GEOKA
Length = 183
Score = 91.3 bits (225), Expect = 5e-17
Identities = 63/187 (33%), Positives = 110/187 (58%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++++VE K+G+ ++++ +V V ++ + + G+G + EVT+ H ++
Sbjct: 12 VTPALREYVEKKIGK-LERYFDGTEDVHVHVNLKVYND-GQG----KIEVTI-PMPHLLL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE E Y +IDLV+ ++R++RK K K + K +R K +++ P+PS
Sbjct: 65 RAEERHEDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKEAKLAAPVPSGASAA 119
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E ++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET NIVY
Sbjct: 120 E-------NNEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 170
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 171 RRKDGKY 177
[110][TOP]
>UniRef100_Q4L4H7 Uncharacterized protein SH2139 n=1 Tax=Staphylococcus haemolyticus
JCSC1435 RepID=Y2139_STAHJ
Length = 192
Score = 91.3 bits (225), Expect = 5e-17
Identities = 61/188 (32%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ ++EDK+G++ + + + V V++ T T + EVT+ K +
Sbjct: 13 ITDAIRNYIEDKIGKLERYFNDVPNAVAHVKVKTYQNS-------TTKIEVTIPLK-NVT 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y IDLV+S ++R++RK K + + +H F + P E+ +
Sbjct: 65 LRAEERHDDLYAGIDLVTSKLERQVRKYKTRV--NRKHKTHGEPEAFVAEVQEAPPENVD 122
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
D + P D E E+I R+K F + P+ EA+ Q+E++ HDFY F + ET +IV
Sbjct: 123 D-VNAEPTNDSEIEII----RSKQFSLKPMDSEEAVLQMELLGHDFYIFTDRETDGTSIV 177
Query: 32 YKRKEGGY 9
YKRK+G Y
Sbjct: 178 YKRKDGKY 185
[111][TOP]
>UniRef100_C7ML59 Ribosomal subunit interface protein n=1 Tax=Cryptobacterium curtum
DSM 15641 RepID=C7ML59_CRYCD
Length = 188
Score = 89.7 bits (221), Expect = 1e-16
Identities = 60/190 (31%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSY--LVREVDVRLSTRGGGEFGRG-PRTRRCEVTLYTKRH 399
++DA+K + E+K+G ++ L+ EV + + E R R CEVT+ K H
Sbjct: 12 VTDALKSYAEEKIGNSMKVMDIDPLIAEVILHV------EQNRAIARPAICEVTMTAKGH 65
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
++R EEH E Y +ID+ ++ + R+LRK K + + + L L +
Sbjct: 66 -IIRVEEHEEDMYAAIDVAAAKVLRQLRKFKTRVVERNTRTDAASIRSAKSAKLDLDALM 124
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
EE DDE VVR K D+ PLT EA+ +++++ HDF+A+ + +T E
Sbjct: 125 EE-------LSDDE------VVREKSIDLQPLTEEEALVEIDLLGHDFFAYTDRDTNEFR 171
Query: 38 IVYKRKEGGY 9
I+Y+R+ GGY
Sbjct: 172 ILYRRRNGGY 181
[112][TOP]
>UniRef100_B0NJJ3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NJJ3_EUBSP
Length = 179
Score = 89.7 bits (221), Expect = 1e-16
Identities = 58/187 (31%), Positives = 102/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ +K+ VE+K+G+ ++++ E+ V LS + ++ EVT+ K G++
Sbjct: 12 VTPGLKEAVENKLGK-LERYFTPDTEIHVTLSVQR--------ERQKIEVTIPVKG-GII 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+LRK K K RH +G K ++
Sbjct: 62 RSEQESSDMYVSIDLVEEVIERQLRKYKNKLI--ARHQEGSGNFK-------------QE 106
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ + +D+ E+ ++VRTK F P+ +A Q+E++ HDF+ F N ET E+N+VY
Sbjct: 107 FFDSGERSEDDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFFVFCNAETDEVNVVY 164
Query: 29 KRKEGGY 9
+RK G +
Sbjct: 165 RRKNGTF 171
[113][TOP]
>UniRef100_B8GDB0 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Chloroflexus aggregans DSM 9485 RepID=B8GDB0_CHLAD
Length = 197
Score = 89.4 bits (220), Expect = 2e-16
Identities = 54/191 (28%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKV---GRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRH 399
+S+ ++H+E+K+ GR + + + EV G + R + TL +
Sbjct: 12 ISERQREHIEEKLAKLGRYLNGITSITVEVQHEQQRNVGEVY-------RVQTTLVAEHG 64
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSE 222
++RAEE A Y +ID V ++QR++++ K+K R ++ N L +E + +E
Sbjct: 65 VILRAEERAADLYAAIDAVQEVLQRQIQRYKDKYWRRSRELRRATNGLTPAEEVAIAEAE 124
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
E + E E + +V+RTK F + P+ V +AI+Q+E++ H F+ F++ ET +I
Sbjct: 125 TEAMTAPV------ETEPVAKVIRTKTFRLRPMFVDDAIEQMELLGHTFFVFQDAETMQI 178
Query: 41 NIVYKRKEGGY 9
+++Y+R++G Y
Sbjct: 179 SVLYRRRDGNY 189
[114][TOP]
>UniRef100_B0G387 Putative uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC
27755 RepID=B0G387_9FIRM
Length = 177
Score = 89.0 bits (219), Expect = 2e-16
Identities = 59/187 (31%), Positives = 102/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ +K VE K+G+ +Q++ E+ V LS + ++ EVT+ K + ++
Sbjct: 12 VTPGLKDAVESKLGK-LQRYFTPDTEIHVTLSVQ--------KEHQKIEVTIPVKGN-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ ++ Y SIDLV +I+R+LRK K K ++ +G N FS+ + E+D
Sbjct: 62 RSEQESDDMYVSIDLVEEVIERQLRKYKNKLV--AKNQEGNN---FSKTLFETEESIEDD 116
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E++I VRTK F + P+ +A Q+E++ H+F+ F N E E+N+VY
Sbjct: 117 EVKI--------------VRTKRFGIKPMYPEDACVQMELLGHNFFVFFNAENEEVNVVY 162
Query: 29 KRKEGGY 9
KRK+G +
Sbjct: 163 KRKDGSF 169
[115][TOP]
>UniRef100_C8NDQ1 Ribosomal subunit interface protein n=1 Tax=Granulicatella adiacens
ATCC 49175 RepID=C8NDQ1_9LACT
Length = 186
Score = 88.6 bits (218), Expect = 3e-16
Identities = 60/187 (32%), Positives = 104/187 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++Q+ E K+ + ++K+ V ++ + E +T + EVT+ + V+
Sbjct: 19 VTEAIRQYAEKKISK-LEKYFTDVANATAYVNLKVYTE-----KTAKVEVTIPLP-YLVL 71
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE + YGSIDLV ++R++RK K K + +R K +++LP
Sbjct: 72 RAEETSIDLYGSIDLVVDKLERQVRKHKTK-------INRKSREKGFDIVLPT------- 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
P+ +EEE E+VRTK D+ P+ EA+ Q+ M+ H+F+ +++ ET E NIVY
Sbjct: 118 ----LPEAPEEEETGLEIVRTKRIDLKPMDSEEAVLQMNMLGHNFFIYQDAETNETNIVY 173
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 174 RRKDGKY 180
[116][TOP]
>UniRef100_C2LVK8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus hominis
SK119 RepID=C2LVK8_STAHO
Length = 191
Score = 88.6 bits (218), Expect = 3e-16
Identities = 56/191 (29%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ ++E+K+G++ + + + V V++ T + EVT+ K +
Sbjct: 13 ITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYQNS-------ATKIEVTIPLK-NVT 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE- 216
+RAEE + Y IDLV+S ++R++RK K + R P P +E +
Sbjct: 65 LRAEERHDDLYAGIDLVTSKLERQVRKYKTRVNRKNRDNGEPE---------PFIAEQQT 115
Query: 215 --EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
+++E T + +E E+ E++R+K F + P+ EA+ Q++++ HDFY F + ET
Sbjct: 116 VVNEDVEATSESSNENEI--EIIRSKQFSLKPMDSEEAVLQMDLLGHDFYIFTDRETDGT 173
Query: 41 NIVYKRKEGGY 9
+IVY+RK+G Y
Sbjct: 174 SIVYRRKDGKY 184
[117][TOP]
>UniRef100_A6BHR0 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHR0_9FIRM
Length = 178
Score = 88.6 bits (218), Expect = 3e-16
Identities = 64/187 (34%), Positives = 102/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ +++ VE K+G+ + ++ E+ V LS + G + + EVT+ K G+V
Sbjct: 12 VTPGLREAVESKLGK-LGRYFTPNTEIHVTLSVQKGHQ--------KIEVTIPVKG-GLV 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+LRK K K R +G N F + D ED
Sbjct: 62 RSEQESSDMYVSIDLVEEVIERQLRKYKNKLV--AREQEGGN---FKQEFF-----DAED 111
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
IE D+ E+ ++VRTK F P+ +A Q+E++ HDFY F N E+ E+N+VY
Sbjct: 112 NIE------DDGEI--KIVRTKKFGFKPMYPEDACVQMELLGHDFYVFCNAESDEVNVVY 163
Query: 29 KRKEGGY 9
+RK G +
Sbjct: 164 RRKNGTF 170
[118][TOP]
>UniRef100_A9W9Y4 Ribosomal subunit interface protein n=2 Tax=Chloroflexus
RepID=A9W9Y4_CHLAA
Length = 197
Score = 88.2 bits (217), Expect = 4e-16
Identities = 54/191 (28%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS---TRGGGEFGRGPRTRRCEVTLYTKRH 399
+SD + H+E+K+ + ++++ + + + V + R GE R + TL +
Sbjct: 12 ISDRQRAHIEEKLSK-LERYLHGITSITVEVQHEQQRNAGE------VYRVQTTLVAEHG 64
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMK-GPNRLKFSEVILPLPSE 222
++RAEE A Y +ID V ++QR++ + K+K R + PN L +E +
Sbjct: 65 VILRAEERAPDLYAAIDEVQEVLQRQIARYKDKYWRRSREQRRAPNGLTPAEEVA---IA 121
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
+ E TP + E V+RTK F + P+ V +AI+Q+E++ H+F+ F++ ET ++
Sbjct: 122 EAEAAALATPTEVGSEA---RVIRTKTFRLRPMFVDDAIEQMELLGHNFFVFQDAETMQV 178
Query: 41 NIVYKRKEGGY 9
+++Y+R++G Y
Sbjct: 179 SVLYRRRDGNY 189
[119][TOP]
>UniRef100_A8S366 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8S366_9CLOT
Length = 187
Score = 88.2 bits (217), Expect = 4e-16
Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++ +K VE K+G++ +H + EV V LS + + + EVT+ K +
Sbjct: 23 VTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KIEVTIPVKGN-T 71
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y SIDLV II+R++R+ ++K D K + FS+ + +EE
Sbjct: 72 IRAEESSTDMYVSIDLVEEIIERQIRRYRKKLID-----KKQAAISFSQAFI-----EEE 121
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
DE++ DDE + +V+TK F + P EA Q+EM+ H+FY F N +T ++N+V
Sbjct: 122 DEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNADTDQVNVV 172
Query: 32 YKRKEGGY 9
YKRK G Y
Sbjct: 173 YKRKNGTY 180
[120][TOP]
>UniRef100_C0CVD1 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
DSM 15981 RepID=C0CVD1_9CLOT
Length = 176
Score = 87.8 bits (216), Expect = 5e-16
Identities = 62/188 (32%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++ +K VE K+G++ +H + EV V LS + + + EVT+ K +
Sbjct: 12 VTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KIEVTIPVKGN-T 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y SIDLV +I+R++R+ ++K D K L FS+ + +++E
Sbjct: 61 IRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAALSFSQAFIDEEEDEQE 115
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
D+I I V+TK F + P EA Q+EM+ H+FY F N +T ++N+V
Sbjct: 116 DDIRI--------------VKTKKFAIKPTIPEEACLQMEMLGHNFYVFLNSDTDQVNVV 161
Query: 32 YKRKEGGY 9
YKRK G Y
Sbjct: 162 YKRKNGTY 169
[121][TOP]
>UniRef100_C0BAM2 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
27758 RepID=C0BAM2_9FIRM
Length = 189
Score = 87.8 bits (216), Expect = 5e-16
Identities = 64/187 (34%), Positives = 97/187 (51%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ ++Q VE K+G++ Y E D+ ++ E ++ EVT+ K + ++
Sbjct: 23 ITPGLRQAVEQKLGKL---EKYFTPETDIIVTLSVEKE------RQKIEVTIPVKGN-II 72
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV II+R+LRK K K +G + + E I S E D
Sbjct: 73 RSEQESSDMYVSIDLVEEIIERQLRKYKTKLI---AKQQGGHDFR-QEFIESDTSAAESD 128
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
EIEI VRTK F + P+ +A Q+E++ H+FY F N ET E+N+VY
Sbjct: 129 EIEI--------------VRTKRFGIKPMFPEDACIQMELLGHNFYVFSNAETDEVNVVY 174
Query: 29 KRKEGGY 9
KRK G Y
Sbjct: 175 KRKNGTY 181
[122][TOP]
>UniRef100_Q04E96 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Oenococcus oeni PSU-1 RepID=Q04E96_OENOB
Length = 190
Score = 87.4 bits (215), Expect = 7e-16
Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
Frame = -2
Query: 566 SDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
+DA+ +++ +K+ I + + + ++VR +T + EVT+ +
Sbjct: 14 TDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEVTIPLP-YL 63
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
+RAEE Y ++DLVS+ + R++RK K + R +G + F+E I P+PS+
Sbjct: 64 TLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAIDPVPSDTN 122
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
ED+ K D V+R K + P+ + EA+ Q+EM+DHDF+ F N +T +++I
Sbjct: 123 EDK------KID-------VIRRKNLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQLDI 169
Query: 35 VYKRKEGGY 9
VYKR +G Y
Sbjct: 170 VYKRDDGKY 178
[123][TOP]
>UniRef100_A7GUW3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUW3_BACCN
Length = 179
Score = 87.4 bits (215), Expect = 7e-16
Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + I+++ EV V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-IERYFDTFPEVKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV I+R++RK K K R KG + F LP + +
Sbjct: 61 LRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSAKTAFI-----LPDQLGQ 114
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+E++ E+EL E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E NIV
Sbjct: 115 EEVQ-------EDEL--ELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNIV 165
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 166 YGRKDGKY 173
[124][TOP]
>UniRef100_A5UVY5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Roseiflexus sp. RS-1 RepID=A5UVY5_ROSS1
Length = 193
Score = 87.4 bits (215), Expect = 7e-16
Identities = 58/188 (30%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+S+ +QH+E K+ R+ + YL R V + G R +VT+ +V
Sbjct: 12 ISERQRQHIEQKLSRLDR---YLDRIAQVTVEHMEEMRRNEG-NVHRVQVTVVGDHGVLV 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE A Y +ID V +QR++ + K+K H R +G R + +++ LP
Sbjct: 68 RAERRAPELYAAIDEVYDTLQRQIERYKDK---HWR--RGKLRRQGGQIVEALP------ 116
Query: 209 EIEITPQKD-DEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E+ D EEE +VRTK F + P+ EA++Q+E++ H+F+ F++ +TG++N++
Sbjct: 117 ELAAPSLADTQEEEERPRIVRTKEFQVKPMYSDEAVEQMELLGHNFFIFQDADTGKLNVL 176
Query: 32 YKRKEGGY 9
Y+R++G Y
Sbjct: 177 YRRQDGNY 184
[125][TOP]
>UniRef100_C5EVT1 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EVT1_9FIRM
Length = 187
Score = 87.4 bits (215), Expect = 7e-16
Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLV-REVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++ +K VE K+G++ +H + EV V LS + + + EVT+ K +
Sbjct: 23 VTPGLKAAVEKKIGKL--EHFFTPDTEVIVALSAQKDRQ--------KIEVTIPVKGN-T 71
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y SIDLV +I+R++R+ ++K D K + FS+ + +EE
Sbjct: 72 IRAEESSTDMYVSIDLVEEVIERQIRRYRKKLID-----KKQAAISFSQAFI-----EEE 121
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
DE++ DDE + +V+TK F + P EA Q+EM+ H FY F N +T ++N+V
Sbjct: 122 DEVQ-----DDEIQ----IVKTKKFAIKPTIPEEACLQMEMLGHSFYVFLNADTDQVNVV 172
Query: 32 YKRKEGGY 9
YKRK G Y
Sbjct: 173 YKRKNGTY 180
[126][TOP]
>UniRef100_A0NI00 Ribosomal subunit interface protein n=1 Tax=Oenococcus oeni ATCC
BAA-1163 RepID=A0NI00_OENOE
Length = 190
Score = 87.4 bits (215), Expect = 7e-16
Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 3/189 (1%)
Frame = -2
Query: 566 SDAVKQHVE---DKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
+DA+ +++ +K+ I + + + ++VR +T + EVT+ +
Sbjct: 14 TDAINNYIKLRLEKLNNYIDQKNNPIAHINVRKYNE---------KTFKIEVTIPLP-YL 63
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
+RAEE Y ++DLVS+ + R++RK K + R +G + F+E I P+PS+
Sbjct: 64 TLRAEETQSDFYNAVDLVSAKLLRQIRKFKTRVNRKSRE-RGFKGIDFNEAIDPVPSDTN 122
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
ED+ K D V+R K + P+ + EA+ Q+EM+DHDF+ F N +T +++I
Sbjct: 123 EDK------KID-------VIRRKTLSLKPMDIEEAVLQMEMLDHDFFLFLNSDTNQLDI 169
Query: 35 VYKRKEGGY 9
VYKR +G Y
Sbjct: 170 VYKRDDGKY 178
[127][TOP]
>UniRef100_B9I248 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I248_POPTR
Length = 115
Score = 87.4 bits (215), Expect = 7e-16
Identities = 52/105 (49%), Positives = 63/105 (60%), Gaps = 14/105 (13%)
Frame = -2
Query: 326 RKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI---- 165
RKLRKIK+KE+DHGRHMKG N+LK E P+ E D ++ +KDD+ +EL
Sbjct: 8 RKLRKIKDKESDHGRHMKGFNKLKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHL 64
Query: 164 --------EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54
V TKYFDMPPLTV EAI +L VDH FY F + E
Sbjct: 65 VTIHSIISSNAVHTKYFDMPPLTVDEAIVRLGNVDHAFYGFGHAE 109
[128][TOP]
>UniRef100_Q1AVJ5 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AVJ5_RUBXD
Length = 189
Score = 87.0 bits (214), Expect = 9e-16
Identities = 53/142 (37%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Frame = -2
Query: 425 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKF 252
E TL+ V++A E +E Y SID +S ++R++++ + ++ D HGR LK
Sbjct: 59 ETTLFING-AVLKAREASEDMYASIDRMSDKLERQVKRYRGRQVDRWHGR-------LK- 109
Query: 251 SEVILPLPSEDEEDEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDF 75
E E P +EEE IE +VRTK F M P++ EA+ Q+E++DHDF
Sbjct: 110 ---------NHEGARAEPQPFVAEEEEDIEPRIVRTKQFQMKPMSAEEAVLQMELLDHDF 160
Query: 74 YAFRNEETGEINIVYKRKEGGY 9
+ F N +TG+IN+VY+R++G Y
Sbjct: 161 FVFTNADTGDINVVYRRRDGNY 182
[129][TOP]
>UniRef100_C2QJQ3 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Bacillus cereus R309803 RepID=C2QJQ3_BACCE
Length = 180
Score = 87.0 bits (214), Expect = 9e-16
Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+G+ ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLGK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV I+R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[130][TOP]
>UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6G1P8_9CLOT
Length = 190
Score = 87.0 bits (214), Expect = 9e-16
Identities = 57/187 (30%), Positives = 99/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D +K + EDK+ ++ YL + +V+++ G ++ EV + +
Sbjct: 20 LTDGIKGYTEDKLKKL---GKYLDEDTEVKVTVSAG------KNRQKVEVMIPNVNGHTI 70
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R EE + Y +IDLV + R++ K K+K + G +++ + EE
Sbjct: 71 RVEEEQDNLYPAIDLVCDKLSRQIIKYKDK---FKTRVPGNFSIRYEGI--------EEL 119
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E+ + ++ E +IE R K F++ P+++ EAI Q+ + DHDFY F++ E+ EI +VY
Sbjct: 120 AQELDYEVEEPEVVIE---RRKKFNLKPMSIEEAILQMNLTDHDFYMFKDRESFEICLVY 176
Query: 29 KRKEGGY 9
KRKEGGY
Sbjct: 177 KRKEGGY 183
[131][TOP]
>UniRef100_A6CQE4 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. SG-1
RepID=A6CQE4_9BACI
Length = 189
Score = 87.0 bits (214), Expect = 9e-16
Identities = 59/187 (31%), Positives = 98/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++ HVE+K+G+ + ++ + DV ++ + + + + EVT+ H V+
Sbjct: 13 VTPAIRDHVENKIGK-LNRYFNETPDADVHVNLKVYPD-----KKTKVEVTI-PMPHLVL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE E Y +IDL+ ++R++RK K K R P ++ L +E
Sbjct: 66 RAEERHEDMYAAIDLIVDKLERQIRKHKTKVNRKMREKGSPKEFFAAQEGLTTSQLNE-- 123
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
K E E +EVVRTK F++ P+ EAI Q+ ++ H F+ F + ET NIVY
Sbjct: 124 -------KARETEENDEVVRTKQFNLKPMDSEEAILQMNLLGHSFFIFTDAETNATNIVY 176
Query: 29 KRKEGGY 9
KR++G Y
Sbjct: 177 KRRDGKY 183
[132][TOP]
>UniRef100_A5KKP2 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC
27756 RepID=A5KKP2_9FIRM
Length = 198
Score = 87.0 bits (214), Expect = 9e-16
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ +K+ +E K+G+ ++++ E+ V LS G + + EVT+ K ++
Sbjct: 25 VTPGLKEAIEQKLGK-LERYFTPETEIIVTLSVEKGRQ--------KIEVTIPVKG-SII 74
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+LRK K K + +PS +
Sbjct: 75 RSEQTSSDMYVSIDLVEEVIERQLRKYKNKLVAKSQ----------GHPTAAVPSGSIKK 124
Query: 209 E-IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E IE + D++E+ +VRTK F + P+ +A Q+E++ H F+ F N ET E+N+V
Sbjct: 125 EFIESDDESSDDDEI--RIVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAETDEVNVV 182
Query: 32 YKRKEGGY 9
YKRK+G +
Sbjct: 183 YKRKDGSF 190
[133][TOP]
>UniRef100_B9MLV8 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Anaerocellum thermophilum DSM 6725
RepID=B9MLV8_ANATD
Length = 181
Score = 86.7 bits (213), Expect = 1e-15
Identities = 60/189 (31%), Positives = 104/189 (55%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA+K+ +E K+ + ++++ L +V V LS EVT+ HG++
Sbjct: 12 VTDALKERIEKKLSK-LERYIKLNTDVHVTLSVEKISHI--------VEVTI--PFHGMI 60
Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
RAEE + Y +IDLV ++R++RK K K R K +E + + E EE
Sbjct: 61 LRAEERSNDMYSAIDLVVDTLERQIRKFKTKIA---------KRAKDAESLRYMTFELEE 111
Query: 212 DEIEITPQKDDEEELIE-EVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
P+K+ +EE E + +TK F + P++V EAI Q+ ++ H+F+ F N++T ++N+
Sbjct: 112 ------PEKEVQEENSEFRIAKTKRFPIKPMSVEEAILQMNLLGHNFFVFLNQDTDKVNV 165
Query: 35 VYKRKEGGY 9
VY+R +G Y
Sbjct: 166 VYRRNDGAY 174
[134][TOP]
>UniRef100_B7GL70 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Anoxybacillus
flavithermus WK1 RepID=B7GL70_ANOFW
Length = 182
Score = 86.7 bits (213), Expect = 1e-15
Identities = 60/187 (32%), Positives = 98/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++++VE K+G+ ++++ V V ++ + + + + EVT+ + V+
Sbjct: 12 VTQAIREYVEKKIGK-LERYFESTEGVTVHVNLKVYND-----KQAKIEVTIPMPQI-VL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE + Y +IDLV ++R++RK K K R K N + + + E EE+
Sbjct: 65 RAEERHDDMYAAIDLVVDKLERQIRKHKTKVNRKMRE-KEANGVTLTATVPVATEEHEEE 123
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E E VVRTK F + P+ EAI Q+ M+ H+FY F N ET N+VY
Sbjct: 124 EFE--------------VVRTKRFSLKPMDSEEAILQMNMLGHNFYVFINAETNRTNVVY 169
Query: 29 KRKEGGY 9
KRK+G Y
Sbjct: 170 KRKDGKY 176
[135][TOP]
>UniRef100_D0BMS6 Ribosomal subunit interface protein n=1 Tax=Granulicatella elegans
ATCC 700633 RepID=D0BMS6_9LACT
Length = 182
Score = 86.7 bits (213), Expect = 1e-15
Identities = 60/187 (32%), Positives = 103/187 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ + E K+ + ++K+ V V ++ + E +T + EVT+ + V+
Sbjct: 13 VTEAIRNYAEKKLSK-LEKYFGDVANATVHVNLKVYTE-----KTAKVEVTIPLP-YLVL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE + YGSIDLV ++R++RK K K R KG F + P
Sbjct: 66 RAEETSGDLYGSIDLVIDKLERQVRKYKTKINRKSRE-KG-----FDIPVAP-------- 111
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ P+ DE+E + E+VRTK D+ P+ EA+ Q+ M+ H+F+ +++ ET E +IVY
Sbjct: 112 ---VVPEPVDEDESVLEIVRTKRVDLKPMDSEEAVLQMNMLGHNFFIYQDAETNETHIVY 168
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 169 RRKDGKY 175
[136][TOP]
>UniRef100_A8U6N5 Ribosomal subunit interface protein n=1 Tax=Carnobacterium sp. AT7
RepID=A8U6N5_9LACT
Length = 180
Score = 86.7 bits (213), Expect = 1e-15
Identities = 61/186 (32%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Frame = -2
Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381
A++ +VE KVG+V +K+ V E ++ + + +T + EVT+ + V+RAE
Sbjct: 16 AIRSYVEKKVGKV-EKYFNDVPEATAHVNLKTYSD-----KTAKVEVTIPLP-YLVLRAE 68
Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILP--LPSEDEEDE 207
E + YGS+DLVS ++R++RK K K R + S V++P LP E++E
Sbjct: 69 ETSPDLYGSVDLVSDKLERQMRKYKTKIN---------RRTRGSNVVVPPVLPGEEQESH 119
Query: 206 IEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYK 27
E+E+ +VRTK + P+ EA+ Q++M+ H+F+ F + +T +IVY+
Sbjct: 120 ---------EDEV--NIVRTKRLSLKPMDSEEAVLQMDMLGHNFFIFEDADTNGTSIVYR 168
Query: 26 RKEGGY 9
RK+G Y
Sbjct: 169 RKDGKY 174
[137][TOP]
>UniRef100_Q5WDF7 Ribosomal protein S30EA n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WDF7_BACSK
Length = 184
Score = 85.9 bits (211), Expect = 2e-15
Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++ A+++++E KVG++ + +V+V+L G GE EVT+ + +
Sbjct: 12 VTPAIREYIEKKVGKLERYFDTTPTADVNVKLQVLGSGESS-------IEVTIPMPKL-L 63
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+R EE Y +ID+V ++R++RK K K R +G + F + PL E E
Sbjct: 64 LRGEEINADMYAAIDIVVEKLERQIRKYKTKVNRKFRQ-EGSLKYMFKNELEPLRDEVAE 122
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
D+ EL EVVRTK F++ P+ EAI Q++++ H+F+ F + E+G N+V
Sbjct: 123 DD-----------EL--EVVRTKRFNLKPMDAEEAILQMDLLGHNFFVFSDAESGSTNVV 169
Query: 32 YKRKEGGY 9
Y+RK+G Y
Sbjct: 170 YRRKDGKY 177
[138][TOP]
>UniRef100_A5Z528 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
ATCC 27560 RepID=A5Z528_9FIRM
Length = 179
Score = 85.9 bits (211), Expect = 2e-15
Identities = 59/187 (31%), Positives = 99/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++ ++ VE+K+G+ + K+ VDV LS ++ EVT+ K ++
Sbjct: 12 VTEGIRSAVEEKIGK-LDKYFAEETRVDVTLSVN--------KNEQKVEVTIPVKGR-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE ++ Y SID+V I+R+L K K K D + +K F+E + EDE
Sbjct: 62 RAEEISDDMYVSIDMVEETIERQLVKYKNKIIDKKKSIKEA----FTETYIEADYEDE-- 115
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
DE+++ ++ +TK F + P+ EA ++E++ H+F+ F N ET E+N+VY
Sbjct: 116 ---------DEDQI--KIKKTKRFGIKPMDPEEACVEMELLGHNFFVFLNAETEEVNVVY 164
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 165 KRKGNTY 171
[139][TOP]
>UniRef100_Q49VV1 Uncharacterized protein SSP1964 n=1 Tax=Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305
RepID=Y1964_STAS1
Length = 190
Score = 85.9 bits (211), Expect = 2e-15
Identities = 56/188 (29%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ ++E+K+G++ + + + V++ T + EVT+ K+
Sbjct: 13 ITDAIRNYIEEKIGKLERYFNDVPNATAHVKVKTYQNS-------ATKIEVTIPLKKV-T 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y IDL+++ ++R++RK K + R+ +G E LP E E
Sbjct: 65 LRAEERNDDLYAGIDLINNKLERQVRKYKTRVNRRNRN-RGEQ-----EAFASLPEEKEA 118
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
EI+ + D E E++R K F + P+ EA+ Q++++ HDF+ F + ET +IV
Sbjct: 119 VEIQNDENEADNEI---EIIRAKNFSLKPMDSEEAVLQMDLLGHDFFIFTDRETDGTSIV 175
Query: 32 YKRKEGGY 9
YKRK+G Y
Sbjct: 176 YKRKDGKY 183
[140][TOP]
>UniRef100_Q8XIE9 30S ribosomal protein S30AE family n=1 Tax=Clostridium perfringens
RepID=Q8XIE9_CLOPE
Length = 179
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/129 (35%), Positives = 76/129 (58%)
Frame = -2
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
++R EE + Y SIDLV I+R++RK K + + R+ + L+F+
Sbjct: 60 LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH---------- 105
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F++ ET ++N+
Sbjct: 106 -----IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV 160
Query: 35 VYKRKEGGY 9
VYKRK+G Y
Sbjct: 161 VYKRKDGNY 169
[141][TOP]
>UniRef100_Q0SR10 Ribosomal subunit interface protein n=1 Tax=Clostridium perfringens
SM101 RepID=Q0SR10_CLOPS
Length = 179
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/129 (35%), Positives = 76/129 (58%)
Frame = -2
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
++R EE + Y SIDLV I+R++RK K + + R+ + L+F+
Sbjct: 60 LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH---------- 105
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F++ ET ++N+
Sbjct: 106 -----IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV 160
Query: 35 VYKRKEGGY 9
VYKRK+G Y
Sbjct: 161 VYKRKDGNY 169
[142][TOP]
>UniRef100_C4ZI34 Ribosome-associated protein Y (PSrp-1) n=1 Tax=Eubacterium rectale
ATCC 33656 RepID=C4ZI34_EUBR3
Length = 175
Score = 85.5 bits (210), Expect = 3e-15
Identities = 63/187 (33%), Positives = 99/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L++ +KQ VE+K+ + ++K +V V LS + + EVT+ K H V+
Sbjct: 12 LTEGLKQAVEEKLSK-LEKFFKPDTDVYVTLSVEKDRQ--------KIEVTIPAKGH-VI 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+LRK + K + K++ I ++D
Sbjct: 62 RSEQVSNDMYVSIDLVEEVIERQLRKYRTKISAK----------KYAPAIF------QDD 105
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+E DD E+ ++VRTK F M P+ +A Q+E+ HDF+ FRN E E+N+VY
Sbjct: 106 FVEA----DDAEDEEIKIVRTKRFGMKPMYPEDACIQMELSGHDFFVFRNAENDEVNVVY 161
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 162 KRKGHTY 168
[143][TOP]
>UniRef100_C4Z2Z4 Putative sigma-54 modulation protein n=1 Tax=Eubacterium eligens
ATCC 27750 RepID=C4Z2Z4_EUBE2
Length = 175
Score = 85.5 bits (210), Expect = 3e-15
Identities = 59/187 (31%), Positives = 97/187 (51%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++ +K VE+K+G+ + + EV+V LS ++ EVT+ K + ++
Sbjct: 12 ITEGLKSAVEEKLGK-LDRFFAPETEVNVTLSVE--------KERQKIEVTIPVKGN-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+L+K K K D K N F++ + +D+E
Sbjct: 62 RSEQVSSDMYVSIDLVEEVIERQLKKYKNKIVD-----KQQNAAAFAQEFVEKDYDDDEV 116
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+I +RTK F + P+ EA Q+E++ H+FY F N ET E+N+VY
Sbjct: 117 KI----------------IRTKRFGIKPMDPEEACVQMELLGHNFYVFFNSETEEVNVVY 160
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 161 KRKGNTY 167
[144][TOP]
>UniRef100_C0Z6T8 Putative uncharacterized protein yvyD n=1 Tax=Brevibacillus brevis
NBRC 100599 RepID=C0Z6T8_BREBN
Length = 185
Score = 85.5 bits (210), Expect = 3e-15
Identities = 55/184 (29%), Positives = 100/184 (54%)
Frame = -2
Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAE 381
A++++VE KVGR ++K+ + +V+++ RG T + L ++RAE
Sbjct: 15 ALREYVEKKVGR-LEKYFETPQPTEVQVTMH----VHRGEGTIEVTIPLSGV---IIRAE 66
Query: 380 EHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIE 201
E E Y +IDLV ++R++RK K K R + R+ ++ E +
Sbjct: 67 ETHEDMYAAIDLVVEKLERQIRKHKTKLMRKLR-VDSTGRI----------AQRESQPVA 115
Query: 200 ITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRK 21
+ DEE++ ++VRTK FD+ P+ EA+ Q++M+ H F+ F+N +T ++++VY+R
Sbjct: 116 VMIPDVDEEDIDIDIVRTKRFDLKPMDAQEAVMQMDMLGHSFFVFQNSDTNDVSVVYRRN 175
Query: 20 EGGY 9
+G Y
Sbjct: 176 DGRY 179
[145][TOP]
>UniRef100_Q2B1U0 Ribosomal subunit interface protein n=1 Tax=Bacillus sp. NRRL
B-14911 RepID=Q2B1U0_9BACI
Length = 184
Score = 85.5 bits (210), Expect = 3e-15
Identities = 60/187 (32%), Positives = 100/187 (53%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++++VE K+ + ++K+ + +V ++ + + EVT+ ++ V+
Sbjct: 12 VTPAIREYVEKKIAK-LEKYFTETPDANVHVNLKTYNN-----NRSKVEVTI-PMQNLVL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE E Y +IDL+ ++R++RK K K R KG L F+ D
Sbjct: 65 RAEEDHEDMYAAIDLIVDKLERQIRKHKTKVNRKFRE-KGSPTLMFASF----------D 113
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E E ++++ +L EVVR K FD+ P+ EAI Q+ ++ H FY F N ET N+VY
Sbjct: 114 EPEAPVLEEEDNDL--EVVRQKSFDLKPMDNEEAILQMNLLGHSFYVFTNAETNRTNVVY 171
Query: 29 KRKEGGY 9
KRK+G Y
Sbjct: 172 KRKDGRY 178
[146][TOP]
>UniRef100_C9RVC1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Geobacillus RepID=C9RVC1_9BACI
Length = 182
Score = 85.5 bits (210), Expect = 3e-15
Identities = 59/187 (31%), Positives = 104/187 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++++VE K+G+ ++++ +V+V ++ + + G+G + EVT+ H ++
Sbjct: 12 VTPALREYVEKKIGK-LERYFDRTDDVNVHVNLKVYND-GQG----KIEVTIPIP-HLLL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE E Y +IDLV+ ++R++RK K K R + +L I +E+EE+
Sbjct: 65 RAEERHEDMYAAIDLVTDKLERQIRKHKTKVNRKLRDREKEAKLAAPVSIGASAAENEEE 124
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET NIVY
Sbjct: 125 F---------------EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 170 RRKDGKY 176
[147][TOP]
>UniRef100_B7IPV2 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
RepID=B7IPV2_BACC2
Length = 180
Score = 85.5 bits (210), Expect = 3e-15
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV I+R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVMDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[148][TOP]
>UniRef100_C0BYR7 Putative uncharacterized protein n=1 Tax=Clostridium hylemonae DSM
15053 RepID=C0BYR7_9CLOT
Length = 178
Score = 85.5 bits (210), Expect = 3e-15
Identities = 59/187 (31%), Positives = 99/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ +++ VE K+G+ ++K+ E+ V LS ++ EVT+ K + ++
Sbjct: 12 VTPGLRETVEHKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIEVTIPVKGN-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+LRK K K RH +G N E
Sbjct: 62 RSEQVSSDMYVSIDLVEEVIERQLRKYKNKLV--ARHQEGGN------------FRQEFF 107
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E E + DDE + +VRTK F + P+ +A Q++++ HDF+ F N +T E+N+VY
Sbjct: 108 ESEYATEDDDEVK----IVRTKRFGIKPMYPEDACIQMDLLGHDFFVFCNADTDEVNVVY 163
Query: 29 KRKEGGY 9
+RK G +
Sbjct: 164 RRKNGTF 170
[149][TOP]
>UniRef100_B7AN97 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus
ATCC 43243 RepID=B7AN97_9BACE
Length = 179
Score = 85.5 bits (210), Expect = 3e-15
Identities = 59/187 (31%), Positives = 97/187 (51%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++D +K+ VE+K+G+ + + EV V LS ++ EVT+ K ++
Sbjct: 15 VTDGLKEAVEEKLGK-LDRFFAPDTEVKVTLSVE--------KERQKIEVTIPVKG-SII 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+L+K K K D K + F++ + D++
Sbjct: 65 RSEQVSNDMYVSIDLVEEVIERQLKKYKNKLID-----KQQDAAAFAQEYIDKEYVDDDA 119
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+++I +RTK FD+ P+ EA Q+E++ H FY F N ET +IN+VY
Sbjct: 120 DVKI--------------IRTKRFDVKPMDPEEACVQMELLGHSFYVFFNSETEQINVVY 165
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 166 KRKGNTY 172
[150][TOP]
>UniRef100_B5CNW3 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC
29176 RepID=B5CNW3_9FIRM
Length = 186
Score = 85.5 bits (210), Expect = 3e-15
Identities = 60/187 (32%), Positives = 99/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ +K +E K+G+ ++++ E++V LS G + + EVT+ K + ++
Sbjct: 12 VTPGLKDAIEQKLGK-LERYFTPETEINVTLSVEKGRQ--------KIEVTIPVKGN-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ ++ Y SIDLV +I+R+LRK K K R P S E
Sbjct: 62 RSEQTSDNMYVSIDLVEEVIERQLRKYKNKLV--ARSQGHPT----SYTSTGNSFRKEFF 115
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E E +DDE + +VRTK F + P+ +A Q+E++ H F+ F N ET E+N+VY
Sbjct: 116 ETEDDAAEDDEIQ----IVRTKKFGIKPMFPEDACIQMELLGHSFFVFSNAETDEVNVVY 171
Query: 29 KRKEGGY 9
KRK+G +
Sbjct: 172 KRKDGSF 178
[151][TOP]
>UniRef100_Q0TND9 Ribosomal subunit interface protein n=6 Tax=Clostridium perfringens
RepID=Q0TND9_CLOP1
Length = 179
Score = 85.5 bits (210), Expect = 3e-15
Identities = 46/129 (35%), Positives = 76/129 (58%)
Frame = -2
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
++R EE + Y SIDLV I+R++RK K + + R+ + L+F+
Sbjct: 60 LLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRY----DSLRFAH---------- 105
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
I P +D +EE ++V+TK FD+ P+ EA+ Q+E++ HDF+ F++ ET ++N+
Sbjct: 106 -----IDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNV 160
Query: 35 VYKRKEGGY 9
VYKRK+G Y
Sbjct: 161 VYKRKDGNY 169
[152][TOP]
>UniRef100_Q3CZ63 Ribosomal subunit interface protein n=6 Tax=Streptococcus
agalactiae RepID=Q3CZ63_STRAG
Length = 184
Score = 85.1 bits (209), Expect = 3e-15
Identities = 58/185 (31%), Positives = 104/185 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++++VE K+ +V +K+ +E+D R++ + E +T + EVT+ +
Sbjct: 13 VTEAIREYVETKLSKV-EKYFNEAQELDTRVNLKVYRE-----KTAKVEVTILIDSI-TL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V
Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQVFTT-------- 112
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ + + E N++Y
Sbjct: 113 EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLY 169
Query: 29 KRKEG 15
KR++G
Sbjct: 170 KREDG 174
[153][TOP]
>UniRef100_B5UPY3 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
RepID=B5UPY3_BACCE
Length = 180
Score = 85.1 bits (209), Expect = 3e-15
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV I+R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[154][TOP]
>UniRef100_B1SBZ3 Putative uncharacterized protein n=1 Tax=Streptococcus infantarius
subsp. infantarius ATCC BAA-102 RepID=B1SBZ3_9STRE
Length = 182
Score = 85.1 bits (209), Expect = 3e-15
Identities = 56/185 (30%), Positives = 104/185 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ +VE K+G+ I+K+ +E+D R++ + E +T + EVT+ +
Sbjct: 13 VTDAIRNYVESKLGK-IEKYFNAEQELDARVNLKVYRE-----KTAKVEVTILVNSI-TL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV+ I+R++RK K K R +++ SE E +
Sbjct: 66 RAEDVSQDMYGSIDLVTDKIERQIRKNKTKIAKKHREKVPASQI--------FTSEFEAE 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
++ P + VVRTK+ + P+ + EA+ Q++++ HDF+ + + E G NI+Y
Sbjct: 118 PVDEGPAVN--------VVRTKHVSLKPMDLDEALLQMDLLGHDFFIYTDAEDGVTNILY 169
Query: 29 KRKEG 15
+R++G
Sbjct: 170 RREDG 174
[155][TOP]
>UniRef100_P28368 Uncharacterized protein yvyD n=1 Tax=Bacillus subtilis
RepID=YVYD_BACSU
Length = 189
Score = 85.1 bits (209), Expect = 3e-15
Identities = 57/187 (30%), Positives = 98/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A+K HVE K+G++ + + V + DV ++ + + + + EVT+ +
Sbjct: 12 VTPALKDHVERKIGKLERYFDHSV-DADVNVNLKFYND-----KESKVEVTI-PMTDLAL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E H E Y +IDL ++ ++R++RK K K R P L + +
Sbjct: 65 RSEVHNEDMYNAIDLATNKLERQIRKHKTKVNRKFREQGSPKYLLANGL---------GS 115
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ +I Q D EEE ++VR K F++ P+ EAI Q+ M+ H+F+ F N ET N+VY
Sbjct: 116 DTDIAVQDDIEEEESLDIVRQKRFNLKPMDSEEAILQMNMLGHNFFVFTNAETNLTNVVY 175
Query: 29 KRKEGGY 9
+R +G Y
Sbjct: 176 RRNDGKY 182
[156][TOP]
>UniRef100_UPI00006DCB57 hypothetical protein CdifQ_04002839 n=1 Tax=Clostridium difficile
QCD-32g58 RepID=UPI00006DCB57
Length = 138
Score = 84.7 bits (208), Expect = 4e-15
Identities = 51/139 (36%), Positives = 81/139 (58%)
Frame = -2
Query: 425 EVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSE 246
EVT+ ++RAE+ + Y +ID+V + R++ K K K D ++ K ++F
Sbjct: 2 EVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKS---IRFEN 58
Query: 245 VILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAF 66
+ + + E D+ + DDEE+ + R K F++ P++ EAI Q+E+V H+FY F
Sbjct: 59 LDF-IDNSSEFDDYDY----DDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMF 113
Query: 65 RNEETGEINIVYKRKEGGY 9
RN++ EINIVYKRK GGY
Sbjct: 114 RNQDNFEINIVYKRKAGGY 132
[157][TOP]
>UniRef100_C2U573 Ribosome-associated factor Y n=3 Tax=Bacillus cereus
RepID=C2U573_BACCE
Length = 180
Score = 84.7 bits (208), Expect = 4e-15
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV I+R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[158][TOP]
>UniRef100_B7HEI9 Ribosomal subunit interface protein n=9 Tax=Bacillus cereus group
RepID=B7HEI9_BACC4
Length = 180
Score = 84.7 bits (208), Expect = 4e-15
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV I+R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[159][TOP]
>UniRef100_C5D7S1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. WCH70 RepID=C5D7S1_GEOSW
Length = 182
Score = 84.3 bits (207), Expect = 6e-15
Identities = 55/187 (29%), Positives = 106/187 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++++VE K+G+ ++++ ++ V ++ + + + + EVT+ + ++
Sbjct: 12 VTPALREYVEKKIGK-LERYFENTEDIHVHVNLKVYND-----KQGKIEVTIPMPQL-LL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE + Y +IDLV+ ++R++RK K K +L+ E L +++
Sbjct: 65 RAEERHDDMYAAIDLVADKLERQIRKHKTKVN---------RKLRNKETKQVLVTQNNNP 115
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+E +++EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET NIVY
Sbjct: 116 PVE----ENEEEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 170 RRKDGKY 176
[160][TOP]
>UniRef100_A9AY42 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Herpetosiphon aurantiacus ATCC 23779
RepID=A9AY42_HERA2
Length = 186
Score = 84.3 bits (207), Expect = 6e-15
Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVRE--VDVRLST-RGGGEFGRGPRTRRCEVTLYTKRH 399
L DA K +++K+G+ ++++ + + V+ R T RG GE T + TL
Sbjct: 12 LHDAQKAFIQEKLGK-LERYLDGINDWKVECRFETLRGSGE------TYTVQATLLADHG 64
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSE 222
++RAEE Y +++ V +QR++R+ KEK + +G R E+I PLP+
Sbjct: 65 IILRAEERDRELYAAVEAVHDNLQRQIRRFKEKH-----YRRGKLRRTAGEIIAAPLPAL 119
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
E D E+ +++R K + P+ EAI+Q+E++ H F+ FR+ ET +I
Sbjct: 120 PE----------DAEQAEERQIIRAKEVTLRPMFSDEAIEQMELLGHSFFVFRDAETEKI 169
Query: 41 NIVYKRKEGGY 9
+VY+R +G Y
Sbjct: 170 QVVYRRNDGNY 180
[161][TOP]
>UniRef100_Q3DA79 Ribosomal subunit interface protein n=2 Tax=Streptococcus
agalactiae RepID=Q3DA79_STRAG
Length = 184
Score = 84.3 bits (207), Expect = 6e-15
Identities = 58/185 (31%), Positives = 104/185 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++++VE K+ +V +K+ +E+D R++ + E +T + EVT+ +
Sbjct: 13 VTEAIREYVETKLSKV-EKYFNEEQELDTRVNLKVYRE-----KTAKVEVTILIDSI-TL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V
Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYRE-----KIPASQVFTT-------- 112
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E E P DEE + + +VRTK ++ P+ V EA+ Q+E++ HDF+ + + E N++Y
Sbjct: 113 EFEAEP---DEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLY 169
Query: 29 KRKEG 15
KR++G
Sbjct: 170 KREDG 174
[162][TOP]
>UniRef100_C3AT15 Ribosome-associated factor Y n=3 Tax=Bacillus RepID=C3AT15_BACMY
Length = 180
Score = 84.3 bits (207), Expect = 6e-15
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ EV V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEVKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV ++R++RK K K R P + IL P+ E
Sbjct: 61 LRAEETHSDMYAAIDLVVDKVERQIRKHKTKVNRKLREKGSPK----TAFILTEPAATLE 116
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+ K+DE EL VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 117 EV------KEDELEL----VRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[163][TOP]
>UniRef100_B7HX18 Ribosomal subunit interface protein n=6 Tax=Bacillus cereus group
RepID=B7HX18_BACC7
Length = 180
Score = 84.3 bits (207), Expect = 6e-15
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV ++R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDQLELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[164][TOP]
>UniRef100_C0FTS3 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans
DSM 16841 RepID=C0FTS3_9FIRM
Length = 176
Score = 84.3 bits (207), Expect = 6e-15
Identities = 60/187 (32%), Positives = 99/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L++ +K VEDK+ + ++K+ EV+V LS ++ EVT+ K +
Sbjct: 12 LTEGLKAAVEDKLNK-LEKYFTPDTEVNVTLSVE--------KERQKVEVTIPMKG-SYI 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+L+K + K ++ + F DE+
Sbjct: 62 RSEQVSSDMYVSIDLVEEVIERQLKKYRTKLVTKQQNAAAVFKQDFL---------DEKS 112
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E D+EE+ +++RTK FDM P+ +A ++E++ HDFY F N ET ++N+VY
Sbjct: 113 E--------DDEEI--KIIRTKKFDMKPMYPEDACVEMELLGHDFYVFINAETEDVNVVY 162
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 163 KRKGNTY 169
[165][TOP]
>UniRef100_Q72XS8 Ribosomal subunit interface protein n=5 Tax=Bacillus cereus group
RepID=Q72XS8_BACC1
Length = 180
Score = 84.3 bits (207), Expect = 6e-15
Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV ++R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D+ EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDEVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[166][TOP]
>UniRef100_B0MGZ9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MGZ9_9FIRM
Length = 176
Score = 84.3 bits (207), Expect = 6e-15
Identities = 54/187 (28%), Positives = 103/187 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++ ++ +E+K+GR+ YL ++D+ ++ E ++ EVT+ K H ++
Sbjct: 12 VTEGIRAAIEEKLGRL---DKYLTDDIDIIVTLSVQKE------RQKIEVTIPMKGH-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ + Y SIDLV I++R++R+ K + K+ L D+++
Sbjct: 62 RAEQDSADMYVSIDLVIDILERQIRRYKTRLMSK----------KYEGAGLKQEFIDKDE 111
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
++ DE+E+ ++R+K F + P+ V EA Q++++ H+F+ FRN +T E+N+VY
Sbjct: 112 DV-------DEDEI--RIIRSKKFAIKPMDVEEACIQMDLLGHNFFVFRNADTFEVNVVY 162
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 163 KRKGNTY 169
[167][TOP]
>UniRef100_C6D4V5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Paenibacillus sp. JDR-2 RepID=C6D4V5_PAESJ
Length = 182
Score = 84.0 bits (206), Expect = 7e-15
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++++ K+ R+ + E V LS G EVT+ GV+
Sbjct: 12 VTEALREYAVKKISRLEKYFEAPASETTVTLSVTKG--------KHAVEVTIPLV--GVM 61
Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI--LPLPSED 219
RAE+ +E Y SID+V ++R++RK K K RH G L F E + + D
Sbjct: 62 LRAEDKSEDMYSSIDVVVDKLERQIRKHKTKMNRKFRHESGVKAL-FKEGLSQTAVSVMD 120
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
EEDE+E+ VRTK F + P+ V EAI Q+ MV H+F+ F N + E+N
Sbjct: 121 EEDELEL--------------VRTKRFMLKPMDVEEAILQMNMVGHNFFVFSNIDNKEVN 166
Query: 38 IVYKRKEGGY 9
+VYKR +G Y
Sbjct: 167 VVYKRSDGKY 176
[168][TOP]
>UniRef100_B5YF17 Ribosomal subunit interface protein n=1 Tax=Dictyoglomus
thermophilum H-6-12 RepID=B5YF17_DICT6
Length = 179
Score = 84.0 bits (206), Expect = 7e-15
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG-V 393
++D ++Q+ E K+ R + + + ++V S ++ G + R EVT+ K +G +
Sbjct: 12 ITDNLQQYAEKKLSR-LSRFFDNIENIEVLFSEE---DWKDGSKRHRVEVTI--KANGRI 65
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
++A E + SIDLV ++ +L+++KEK D GR E
Sbjct: 66 IKASEANQDFRTSIDLVVDKLETQLKRLKEKLVDKGRRA--------------------E 105
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
EI +K+ EE+ +VV+ K F + P+ V EAI Q+E++ HDF+ FR+ ET I +V
Sbjct: 106 SIREILAEKEVEEK--PQVVKVKRFLLKPMDVEEAILQMELLGHDFFIFRDAETDRIGVV 163
Query: 32 YKRKEGGY 9
YKRK+G Y
Sbjct: 164 YKRKDGKY 171
[169][TOP]
>UniRef100_B4BN91 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. G11MC16 RepID=B4BN91_9BACI
Length = 182
Score = 84.0 bits (206), Expect = 7e-15
Identities = 61/187 (32%), Positives = 107/187 (57%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++++VE K+G+ ++++ V V ++ + + G+G + EVT+ H ++
Sbjct: 12 VTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIPIP-HLLL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE + Y +IDLV+ ++R++RK K K + K +R K ++ P+P+
Sbjct: 65 RAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPVPNGAAAA 119
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET NIVY
Sbjct: 120 E-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 170 RRKDGRY 176
[170][TOP]
>UniRef100_Q9CHS8 Putative uncharacterized protein ygdA n=1 Tax=Lactococcus lactis
subsp. lactis RepID=Q9CHS8_LACLA
Length = 185
Score = 83.6 bits (205), Expect = 1e-14
Identities = 55/187 (29%), Positives = 98/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ +VEDK+G+ + K+ EV ++ + E + + EVTL K + +
Sbjct: 13 VTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYSE-----KRAKVEVTLPAK-NVTL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ Y SID V ++R++RK K + R+ P F + PL DE
Sbjct: 66 RAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQAFGDEFAPLEKADEVA 124
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E + ++VRTK+ + P+ EA+ Q++M+ HDFY F + ++ ++VY
Sbjct: 125 EDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVY 172
Query: 29 KRKEGGY 9
+R +G Y
Sbjct: 173 RRTDGRY 179
[171][TOP]
>UniRef100_Q8ENI5 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis
RepID=Q8ENI5_OCEIH
Length = 185
Score = 83.6 bits (205), Expect = 1e-14
Identities = 55/187 (29%), Positives = 102/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A+K++VE K+ + ++++ DV ++ + +R EVT+ + ++
Sbjct: 12 VTGAIKEYVEKKISK-LERYFDSAPNTDVHVNLSVYND------EQRIEVTI-PMTNLLL 63
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R E Y ++DLV ++R++RK K K R P F+E+ E
Sbjct: 64 RGEVQHIDLYAAVDLVVDKLERQIRKHKTKINRKFRQNGSPKHA-FAEM---------EK 113
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E + ++DE +L E+VRTK F++ P+ EAI Q++M+ H+F+ F N+++GE N+VY
Sbjct: 114 EARLAEDEEDENQL--EIVRTKRFNLKPMDSEEAILQMDMLGHEFFVFTNDDSGETNVVY 171
Query: 29 KRKEGGY 9
+R++G Y
Sbjct: 172 RRRDGKY 178
[172][TOP]
>UniRef100_B4U4G1 Ribosomal subunit interface protein n=1 Tax=Streptococcus equi
subsp. zooepidemicus MGCS10565 RepID=B4U4G1_STREM
Length = 182
Score = 83.6 bits (205), Expect = 1e-14
Identities = 59/185 (31%), Positives = 105/185 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ +VE K+ + I+K+ + +E+D R++ + E +T + EVT+ +
Sbjct: 13 VTEAIRDYVESKLTK-IEKYFVVEQEIDARVNLKVYRE-----KTAKVEVTI-PLGSVTL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V SE E +
Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-----KMSTSQVFT---SEFEAE 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ E TP+ +VVRTK + P+ V EA Q+E++ HDF+ + + E G N++Y
Sbjct: 118 QAEETPEI--------KVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDAEDGATNVLY 169
Query: 29 KRKEG 15
+R++G
Sbjct: 170 RREDG 174
[173][TOP]
>UniRef100_A4ISU0 Ribosomal subunit interface protein n=1 Tax=Geobacillus
thermodenitrificans NG80-2 RepID=A4ISU0_GEOTN
Length = 182
Score = 83.6 bits (205), Expect = 1e-14
Identities = 61/187 (32%), Positives = 107/187 (57%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++++VE K+G+ ++++ V V ++ + + G+G + EVT+ H ++
Sbjct: 12 VTPALREYVEKKIGK-LERYFDDTDHVHVNVNLKVYND-GQG----KIEVTIPIP-HLLL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE + Y +IDLV+ ++R++RK K K + K +R K ++ P+P+
Sbjct: 65 RAEERHDDMYAAIDLVTDKLERQIRKHKTKV-----NRKLRDREKGVKLAAPVPNGAAAV 119
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E +DEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET NIVY
Sbjct: 120 E-------NDEEF---EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRTNIVY 169
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 170 RRKDGRY 176
[174][TOP]
>UniRef100_C6JQA9 Ribosome-associated protein Y n=1 Tax=Fusobacterium varium ATCC
27725 RepID=C6JQA9_FUSVA
Length = 183
Score = 83.6 bits (205), Expect = 1e-14
Identities = 64/190 (33%), Positives = 99/190 (52%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLS---TRGGGEFGRGPRTRRCEVTLYTKRH 399
++DA+K++ E K+GRV + H ++ E+DV LS T+ G + EV Y
Sbjct: 12 VTDAIKKYAETKLGRVEKYHDSII-ELDVSLSAVRTKTGS-------SHTAEVLAYLSG- 62
Query: 398 GVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSED 219
++A Y +ID VS II+ +L+K KEK + + G ++K++
Sbjct: 63 STLKASCTDTDLYAAIDQVSDIIEAQLKKHKEKRAINYGQVPGVKKIKYNP--------- 113
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
E + +E +E VV+ Y P+ + EAI QLE+++ FY F N ETGE+N
Sbjct: 114 ETNTVE--------KEAAVNVVKV-YLPPKPMDIEEAILQLELLNRVFYPFTNCETGEMN 164
Query: 38 IVYKRKEGGY 9
IVYKRK+G Y
Sbjct: 165 IVYKRKDGDY 174
[175][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
carteri f. nagariensis RepID=Q5MCR1_VOLCA
Length = 232
Score = 83.6 bits (205), Expect = 1e-14
Identities = 39/96 (40%), Positives = 64/96 (66%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A+K++VE+KV + IQ ++ ++EVDV LS RGG G + ++ +VT++T R+GVV
Sbjct: 85 VTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQKVDVTIFTLRNGVV 144
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGR 282
R E+ Y +IDLV I+ KL ++KEK G+
Sbjct: 145 RVEDRESNLYAAIDLVCDKIRSKLTRVKEKAITKGK 180
[176][TOP]
>UniRef100_Q030Z0 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Lactococcus lactis subsp. cremoris SK11
RepID=Q030Z0_LACLS
Length = 185
Score = 83.2 bits (204), Expect = 1e-14
Identities = 55/187 (29%), Positives = 99/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ +VEDK+G+ + K+ EV ++ + E + + EVTL K + +
Sbjct: 13 VTDAIRDYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVEVTLPAK-NVTL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ Y SID V ++R++RK K + R+ P F + PL + DE
Sbjct: 66 RAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDEFAPLDTTDEVA 124
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E + ++VRTK+ + P+ EA+ Q++M+ HDFY F + ++ ++VY
Sbjct: 125 EDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVY 172
Query: 29 KRKEGGY 9
+R +G Y
Sbjct: 173 RRTDGRY 179
[177][TOP]
>UniRef100_C0MH43 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Steptococcus equi subsp. zooepidemicus H70
RepID=C0MH43_STRS7
Length = 182
Score = 83.2 bits (204), Expect = 1e-14
Identities = 59/185 (31%), Positives = 105/185 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ +VE K+ + I+K+ +E+D R++ + E +T + EVT+ +
Sbjct: 13 VTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVEVTI-PLGSVTL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V SE E +
Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-----KVSTSQVFT---SEFEAE 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
++E TP+ +VVRTK + P+ V EA Q+E++ HDF+ + + E G N++Y
Sbjct: 118 QVEETPEI--------KVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDAEDGATNVLY 169
Query: 29 KRKEG 15
+R++G
Sbjct: 170 RREDG 174
[178][TOP]
>UniRef100_B9EAE7 Ribosomal subunit interface protein homolog n=1 Tax=Macrococcus
caseolyticus JCSC5402 RepID=B9EAE7_MACCJ
Length = 186
Score = 83.2 bits (204), Expect = 1e-14
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVD--VRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
++DA++ ++E+K+ + ++++ V E + V++ T G+ + EVT+ K
Sbjct: 13 VTDAIRNYIEEKLSK-LERYFTNVPEANAHVKIKTYQDGK-------SKVEVTIPLK-DV 63
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
+RAEE Y +++L+ ++R++RK K K R KG F + P E++
Sbjct: 64 TLRAEERHNDLYAAVNLIVEKLERQIRKHKTKVNRKFRE-KGVKNDIFPVLPGTEPEEEK 122
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
DEIEI +R+K F + P+ EA+ Q+ M+ HDF+ F + ET E NI
Sbjct: 123 GDEIEI--------------IRSKQFALKPMDAEEAVLQMNMLGHDFFIFNDRETNETNI 168
Query: 35 VYKRKEGGY 9
VYKRK+G Y
Sbjct: 169 VYKRKDGKY 177
[179][TOP]
>UniRef100_A9BI17 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Petrotoga mobilis SJ95 RepID=A9BI17_PETMO
Length = 199
Score = 83.2 bits (204), Expect = 1e-14
Identities = 53/194 (27%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGR---VIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRH 399
L++A++ ++E ++ + +++KH +V DVR++ G + E+T +
Sbjct: 12 LTEALENYIEKRMSKPDHLLKKHPDIVSPSDVRITKERG--------IYKVEITTHINPL 63
Query: 398 G-VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK-----ETDHGRHMKGPNRLKFSEVIL 237
+++ EE + Y +ID V+ ++RK+RK+K + TD M+ L+ ++
Sbjct: 64 SKIIKVEERSNDLYEAIDEVTDSLERKIRKLKNRLQEQSRTDKKARMEIEQNLQNPDIKN 123
Query: 236 PLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNE 57
+E+ E EIE P ++VRTK FD+ ++V EA+ Q++++ H F+ FRN
Sbjct: 124 LDLAEENESEIEEKPDAP-------KIVRTKNFDLTLMSVEEAMLQMQLLGHSFFVFRNP 176
Query: 56 ETGEINIVYKRKEG 15
+ I+++Y+RK+G
Sbjct: 177 DNDAISVLYERKDG 190
[180][TOP]
>UniRef100_A9VQA3 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Bacillus cereus group RepID=A9VQA3_BACWK
Length = 180
Score = 83.2 bits (204), Expect = 1e-14
Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV I+R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[181][TOP]
>UniRef100_C2EGB2 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
salivarius ATCC 11741 RepID=C2EGB2_9LACO
Length = 184
Score = 83.2 bits (204), Expect = 1e-14
Identities = 52/144 (36%), Positives = 82/144 (56%)
Frame = -2
Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261
+T + EVT+ + V+RAEE + Y SIDLV+ ++R++RK K K R KG
Sbjct: 50 KTAKVEVTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKN 107
Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81
+F+ P DE++E+E + E+VRTK + P+ EA+ Q++M+ H
Sbjct: 108 FEFA------PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGH 152
Query: 80 DFYAFRNEETGEINIVYKRKEGGY 9
DF+ + + E G INIVY+R++G Y
Sbjct: 153 DFFIYEDAENGGINIVYRRRDGRY 176
[182][TOP]
>UniRef100_C0FKQ0 Putative uncharacterized protein n=1 Tax=Clostridium sp. M62/1
RepID=C0FKQ0_9CLOT
Length = 175
Score = 83.2 bits (204), Expect = 1e-14
Identities = 56/142 (39%), Positives = 77/142 (54%)
Frame = -2
Query: 434 RRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK 255
++ EVT+ K H ++RAEE + Y SIDLV II+R+L+K K K D K +
Sbjct: 48 QKIEVTIPVKGH-IIRAEEQSTDMYVSIDLVEEIIERQLKKYKRKLID-----KKQAPVD 101
Query: 254 FSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDF 75
FSE+ + SE + DEI+I + K F M P+ EA Q+E++ H F
Sbjct: 102 FSELFVQEESEPD-DEIKIE--------------KVKKFAMKPMDPEEACVQMELLGHSF 146
Query: 74 YAFRNEETGEINIVYKRKEGGY 9
Y F N ET E+N+VYKRK Y
Sbjct: 147 YVFLNAETEEVNVVYKRKGHTY 168
[183][TOP]
>UniRef100_Q5M196 Ribosomal subunit interface protein, ribosomal protein S30AE family
n=2 Tax=Streptococcus thermophilus RepID=Q5M196_STRT1
Length = 182
Score = 82.8 bits (203), Expect = 2e-14
Identities = 62/187 (33%), Positives = 103/187 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ +VE K+ +V +K+ + +E+ R++ + E +T + EVT+ T +
Sbjct: 13 VTEALRDYVESKLSKV-EKYFHEDQELHARVNLKVYRE-----KTAKVEVTIPTGSV-TL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ + YGSIDLV I R++RK K K R K P FS +E ++
Sbjct: 66 RAEDVSLDMYGSIDLVVDKIARQIRKNKTKIARKYRE-KVPTGEMFS-------TEFNKE 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E+E P EVVRTK ++ P+ V EAI Q+E++ HDF+ + + E N++Y
Sbjct: 118 EVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIYTDSEDHTTNVLY 169
Query: 29 KRKEGGY 9
KR++G Y
Sbjct: 170 KREDGNY 176
[184][TOP]
>UniRef100_C5WIE9 Ribosome-associated factor Y n=1 Tax=Streptococcus dysgalactiae
subsp. equisimilis GGS_124 RepID=C5WIE9_STRDG
Length = 182
Score = 82.8 bits (203), Expect = 2e-14
Identities = 59/185 (31%), Positives = 105/185 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ +VE K+ + I+K+ +E+D R++ + E ++ + EVT+ +
Sbjct: 13 VTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KSSKVEVTI-PLGSVTL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV I+R++RK K K R K P F+ +E E +
Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-------TEFEAE 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+++ TP+ +VVRTK + P+ V EA Q+E++ HDF+ + + E GE NI+Y
Sbjct: 118 QVDETPEV--------KVVRTKNLTLKPMDVEEARLQMELLGHDFFIYTDAEDGETNILY 169
Query: 29 KRKEG 15
+R++G
Sbjct: 170 RREDG 174
[185][TOP]
>UniRef100_A2RIX0 Putative Sigma 54 modulation protein n=2 Tax=Lactococcus lactis
RepID=A2RIX0_LACLM
Length = 185
Score = 82.8 bits (203), Expect = 2e-14
Identities = 55/187 (29%), Positives = 99/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ +VEDK+G+ + K+ EV ++ + E + + EVTL K + +
Sbjct: 13 VTDAIRAYVEDKIGK-LDKYFNDGHEVTAYVNLKVYTE-----KRAKVEVTLPAK-NVTL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ Y SID V ++R++RK K + R+ P F + PL + DE
Sbjct: 66 RAEDTSQDMYSSIDFVEEKLERQIRKYKTRMNRKPRNAV-PTGQVFGDEFAPLDTTDEVA 124
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E + ++VRTK+ + P+ EA+ Q++M+ HDFY F + ++ ++VY
Sbjct: 125 EDHV------------DIVRTKHVALKPMDAEEAVLQMDMLGHDFYVFTDADSNGTHVVY 172
Query: 29 KRKEGGY 9
+R +G Y
Sbjct: 173 RRTDGRY 179
[186][TOP]
>UniRef100_C7G8P2 Ribosomal subunit interface protein n=1 Tax=Roseburia intestinalis
L1-82 RepID=C7G8P2_9FIRM
Length = 176
Score = 82.8 bits (203), Expect = 2e-14
Identities = 56/187 (29%), Positives = 95/187 (50%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D +K VEDK+ ++ Y + DV ++ E ++ EVT+ K + +
Sbjct: 12 LTDGIKDAVEDKLNKL---EKYFTPDTDVYVTLSVEKE------RQKVEVTIPMKGN-YI 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+L+K + K + + F +
Sbjct: 62 RSEQVSNDMYVSIDLVEEVIERQLKKYRTKLVTKQQSAASVFKQDFLDAA---------- 111
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
DD+EE+ +++R+K FDM P+ +A Q+E++ HDF+ F N ET ++N+VY
Sbjct: 112 -------SDDDEEI--KIIRSKKFDMKPMYPEDACVQMELLGHDFFVFINAETEDVNVVY 162
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 163 KRKGNTY 169
[187][TOP]
>UniRef100_C5QVF5 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
epidermidis W23144 RepID=C5QVF5_STAEP
Length = 189
Score = 82.8 bits (203), Expect = 2e-14
Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ ++E+KVG++ + + + V VR+ T T + EVT+ K
Sbjct: 13 ITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKIEVTIPLK-DVT 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y IDL+++ ++R++RK K + R +G + +EV
Sbjct: 65 LRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQDIFVAEV---------- 113
Query: 212 DEIEITPQKDD-EEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
E Q DD E E E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +I
Sbjct: 114 QESTANNQADDIESENDIEIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSI 173
Query: 35 VYKRKEGGY 9
VY+RK+G Y
Sbjct: 174 VYRRKDGKY 182
[188][TOP]
>UniRef100_C5QQC2 Ribosome-associated inhibitor protein Y n=1 Tax=Staphylococcus
epidermidis M23864:W1 RepID=C5QQC2_STAEP
Length = 191
Score = 82.8 bits (203), Expect = 2e-14
Identities = 52/188 (27%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ ++E+K+G++ + + + V V++ T + EVT+ K
Sbjct: 13 ITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-DVT 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y IDL+++ ++R++RK K + R +G + +EV E
Sbjct: 65 LRAEERHDDLYAGIDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAEV-----QEATP 118
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+E+ + D++ ++ E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV
Sbjct: 119 EEVSGAEEPDNDSDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 176
Query: 32 YKRKEGGY 9
Y+RK+G Y
Sbjct: 177 YRRKDGKY 184
[189][TOP]
>UniRef100_C2SSP0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus BDRD-ST196
RepID=C2SSP0_BACCE
Length = 180
Score = 82.8 bits (203), Expect = 2e-14
Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV I+R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[190][TOP]
>UniRef100_C2Q3D0 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
RepID=C2Q3D0_BACCE
Length = 180
Score = 82.8 bits (203), Expect = 2e-14
Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV I+R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKIERQIRKHKTKVNRKLRE-KGSIKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D EE E+VRTK FD+ P+ V EAI Q++M+ H F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHSFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[191][TOP]
>UniRef100_C2HJY8 Ribosome-associated inhibitor A n=1 Tax=Finegoldia magna ATCC 53516
RepID=C2HJY8_PEPMA
Length = 179
Score = 82.8 bits (203), Expect = 2e-14
Identities = 58/187 (31%), Positives = 91/187 (48%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D +KQ E K+ ++ Y E R+ F + R EVT+ + V+
Sbjct: 12 LTDDLKQMAESKLHKL---DKYFHDEQQARVV------FKKEKDKARVEVTMILDKGVVL 62
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE E +ID V + R++RK K K + N ++F
Sbjct: 63 RAEESNEDIKTAIDKVEDALARQIRKHKTKLQ---KRFTESNSIRF-------------- 105
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E + +D+E I +V+TK F + P+ EAI Q+E++DHDF+ F + +T +N+VY
Sbjct: 106 --EAVEENNDKEIPIGAIVKTKEFGIKPMDKEEAIMQMELIDHDFFVFLDSKTNNVNVVY 163
Query: 29 KRKEGGY 9
KRK+G Y
Sbjct: 164 KRKDGNY 170
[192][TOP]
>UniRef100_C0CJV5 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica
DSM 10507 RepID=C0CJV5_9FIRM
Length = 175
Score = 82.8 bits (203), Expect = 2e-14
Identities = 60/187 (32%), Positives = 100/187 (53%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++D ++ VEDK+G+ ++++ E+ V LS + + EVT+ K + ++
Sbjct: 12 VTDGLRTAVEDKLGK-LERYFTPDTEIIVTLSVEKSRQ--------KIEVTIPVKGN-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+LRK K K D + G + F + + E EED
Sbjct: 62 RSEQVSNDMYVSIDLVEEVIERQLRKYKTKIVD--KEKAGDH---FQKAFIEKEYE-EED 115
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E++I RTK FD+ P+ +A Q+E++ H+F+ F N ET ++N+VY
Sbjct: 116 EVKIQ--------------RTKKFDIKPMYPEDACVQMELLGHNFFVFCNAETDQVNVVY 161
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 162 KRKGNTY 168
[193][TOP]
>UniRef100_B6FRG1 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM
1787 RepID=B6FRG1_9CLOT
Length = 178
Score = 82.8 bits (203), Expect = 2e-14
Identities = 59/187 (31%), Positives = 97/187 (51%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ +K +E K+G+ ++++ E+ V LS ++ EVT+ K H ++
Sbjct: 12 VTPGLKSTIEQKLGK-LERYFTPDTEIIVTLSVE--------KERQKIEVTIPVKGH-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ ++ Y SIDLV +I+R+LRK K K R +G N + E
Sbjct: 62 RSEQVSDDMYVSIDLVEEVIERQLRKYKNKLI--ARQQEGGN------------FQSEFF 107
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E E +DE ++I RTK F + P+ +A Q+E++ H+F+ F N ET E+N+VY
Sbjct: 108 EAEQDTSNNDEIKII----RTKRFGIKPMFPEDACVQMELLGHNFFVFSNAETDEVNVVY 163
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 164 KRKNNTY 170
[194][TOP]
>UniRef100_A0RKX8 Sigma 54 modulation protein / SSU ribosomal protein S30P n=26
Tax=Bacillus cereus group RepID=A0RKX8_BACAH
Length = 180
Score = 82.8 bits (203), Expect = 2e-14
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV ++R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[195][TOP]
>UniRef100_P47995 Uncharacterized protein Sca_0400 n=1 Tax=Staphylococcus carnosus
subsp. carnosus TM300 RepID=Y400_STACT
Length = 188
Score = 82.8 bits (203), Expect = 2e-14
Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ ++EDKVG+ ++++ V V+ + + + + EVT+ +
Sbjct: 13 ITDAIRNYIEDKVGK-LERYFTNVPNVNAHVKVKTYAN-----SSTKIEVTI-PLNDVTL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVIL-PLPSEDEE 213
RAEE + Y IDL+++ ++R++RK K + NR K E P P+ E
Sbjct: 66 RAEERNDDLYAGIDLITNKLERQVRKYKTRV----------NRKKRKESEHEPFPATPET 115
Query: 212 D-EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
E + KDDE E+I R+K F + P+ EA+ Q++++ HDF+ F + ET +I
Sbjct: 116 PPETAVDHDKDDEIEII----RSKQFSLKPMDSEEAVLQMDLLGHDFFIFNDRETDGTSI 171
Query: 35 VYKRKEGGY 9
VY+RK+G Y
Sbjct: 172 VYRRKDGKY 180
[196][TOP]
>UniRef100_C5CEL9 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEL9_KOSOT
Length = 178
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQK-HSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++D +K+H++ K+ +V + +DVR+ G + E+T + V
Sbjct: 12 VTDTMKEHIDKKLAKVFRAIDEDHFTSMDVRVMKERG--------LYKVEITGHLPGF-V 62
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
VR EE + YG ++ +++ ++R++++ KE+ RH +
Sbjct: 63 VRVEERGDDFYGVVEAIANTLERRIKRYKERA--RMRHRASAKEI--------------- 105
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+E P+ DEEE ++ RTK F + P+ + EA+ Q+EM+ H F+ FRN +T E+N++
Sbjct: 106 --LEAIPEVPDEEERGLQITRTKRFSIKPMKIDEALLQMEMLGHTFFVFRNVDTDEVNVL 163
Query: 32 YKRKEG 15
Y RK G
Sbjct: 164 YLRKNG 169
[197][TOP]
>UniRef100_B9DV32 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Streptococcus uberis 0140J RepID=B9DV32_STRU0
Length = 182
Score = 82.4 bits (202), Expect = 2e-14
Identities = 61/185 (32%), Positives = 102/185 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ +VE K+ + I+K+ E+D R++ + E +T + EVT+ ++
Sbjct: 13 VTEAIRDYVEAKLAK-IEKYFVEDSEIDTRVNLKVYRE-----KTAKVEVTIILGSM-IL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV I+R++RK K K R K P F SE E +
Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFR-------SEFETE 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E+E E +VVRTK + P+ V EA Q+E++ HDF+ + + E GE N++Y
Sbjct: 118 EVE--------EGSEVKVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGETNVLY 169
Query: 29 KRKEG 15
+R++G
Sbjct: 170 RREDG 174
[198][TOP]
>UniRef100_B1YLH2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLH2_EXIS2
Length = 187
Score = 82.4 bits (202), Expect = 2e-14
Identities = 59/187 (31%), Positives = 97/187 (51%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA+K +VE K+ ++ + + ++ + E ++ EVT+ + ++
Sbjct: 12 VTDALKDYVEKKLEKLTRYFTTPTEAQTAYVNLKVNNE------KQKVEVTI-PMPNLLL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ Y +IDLV ++R++RK K K GR G F + E
Sbjct: 65 RAEDVNGDMYAAIDLVVDKLERQIRKHKTKINRRGRAKDGGIGEYFKTL--------EGP 116
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E E ++DE EL E+VRTK F + P+ EAI Q++M+ H F+ F + ETG N+VY
Sbjct: 117 EAEAPVYEEDEAEL--ELVRTKRFTLKPMDTEEAILQMDMLGHTFFVFSDAETGNTNVVY 174
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 175 RRKDGRY 181
[199][TOP]
>UniRef100_C6QNN3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNN3_9BACI
Length = 183
Score = 82.4 bits (202), Expect = 2e-14
Identities = 58/191 (30%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++++VE K+G+ ++++ + V ++ + + + + EVT+ + ++
Sbjct: 12 VTPALREYVEKKIGK-LERYFENTENIHVHVNLKVYND-----KQGKIEVTIPMPQL-LL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKET----DHGRHMKGPNRLKFSEVILPLPSE 222
RAEE + Y +IDLV+ ++R++RK K K D + +K + + V P+E
Sbjct: 65 RAEERHDDMYAAIDLVADKLERQIRKHKTKVNRKLRDRDKEVK-----QVATVQTNAPAE 119
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
D E EEE E+VRTK+F + P+ EAI Q+ ++ H+F+ F N ET
Sbjct: 120 DNE-----------EEEF--EIVRTKHFSLKPMDSEEAILQMNLLGHNFFIFTNAETNRT 166
Query: 41 NIVYKRKEGGY 9
NIVY+RK+G Y
Sbjct: 167 NIVYRRKDGKY 177
[200][TOP]
>UniRef100_C2ZFA1 Ribosome-associated factor Y n=2 Tax=Bacillus cereus
RepID=C2ZFA1_BACCE
Length = 180
Score = 82.4 bits (202), Expect = 2e-14
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RIEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV ++R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[201][TOP]
>UniRef100_C2YZ14 Ribosome-associated factor Y n=1 Tax=Bacillus cereus AH1271
RepID=C2YZ14_BACCE
Length = 180
Score = 82.4 bits (202), Expect = 2e-14
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV ++R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSVKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[202][TOP]
>UniRef100_C2WEE0 Ribosome-associated factor Y n=1 Tax=Bacillus cereus Rock3-44
RepID=C2WEE0_BACCE
Length = 180
Score = 82.4 bits (202), Expect = 2e-14
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++VE K+ + ++++ E+ V L +R EVT+ +T +
Sbjct: 12 VTPALKEYVEKKLSK-LERYFDTFPEIKVNLKVYS--------EKQRVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV I+R++RK K K R P E +E
Sbjct: 61 LRAEETHSDMYAAIDLVVDKIERQIRKHKTKVNRKLREKGSPKTTFILTESAATLEEVKE 120
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
D++E+ VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 121 DDLEL--------------VRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[203][TOP]
>UniRef100_C2LQ50 Ribosomal subunit interface protein, ribosomal protein S30AE family
n=1 Tax=Streptococcus salivarius SK126
RepID=C2LQ50_STRSL
Length = 182
Score = 82.4 bits (202), Expect = 2e-14
Identities = 60/187 (32%), Positives = 104/187 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ +VE K+ +V +K+ +E++ R++ + E +T + EVT+ T +
Sbjct: 13 VTEALRDYVESKLSKV-EKYFNEDQELNARVNLKVYRE-----KTAKVEVTIPTGSV-TL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV I+R++RK K K R K P FS ++ +
Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIARKHRE-KVPTGEVFS-------ADFNNE 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
++E P EVVRTK ++ P+ V EAI Q+E++ HDF+ + + E N++Y
Sbjct: 118 QVEEAPAV--------EVVRTKNIELKPMDVEEAILQMELLGHDFFIYTDSEDHTTNVLY 169
Query: 29 KRKEGGY 9
KR++G Y
Sbjct: 170 KREDGNY 176
[204][TOP]
>UniRef100_A5ZRI8 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC
29174 RepID=A5ZRI8_9FIRM
Length = 175
Score = 82.4 bits (202), Expect = 2e-14
Identities = 60/187 (32%), Positives = 96/187 (51%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+S +K VEDK+G+ ++++ EV V LS ++ EVT+ K + ++
Sbjct: 12 VSQGLKTAVEDKLGK-LERYFTPDTEVVVTLSVE--------KERQKIEVTIPMKGN-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV +I+R+LRK K K D K F + L
Sbjct: 62 RSEQVSNDMYVSIDLVEEVIERQLRKYKNKIVD-----KQQAAANFQKEYL--------- 107
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
KD EE+ +++RTK F + P+ +A Q+E++ H+F+ F N ET ++N+VY
Sbjct: 108 ------DKDYEEDEEVKIIRTKKFGIKPMYPEDACVQMELLGHNFFVFFNAETEQVNVVY 161
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 162 KRKGNTY 168
[205][TOP]
>UniRef100_UPI0001789185 sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789185
Length = 188
Score = 82.0 bits (201), Expect = 3e-14
Identities = 67/190 (35%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA+K +V+ K+ R L + D ++ G EVT+ GVV
Sbjct: 12 VTDALKDYVDKKLSR-------LDKYFDAPPTSEGYVTLSVIRGLHTVEVTIPLT--GVV 62
Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLK--FSEVILPLPSED 219
RAE+ ++ Y SID V ++R++RK K K R +K LK +E S+
Sbjct: 63 LRAEDRSDDMYASIDAVVDKLERQIRKHKTKLN---RKIKQEGGLKTLIAENGAAATSQV 119
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+ +++E DE+E EVVRTK F M P+ V EAI Q+ MV H+F+ F N +T E+N
Sbjct: 120 DAEQVEY-----DEDEY--EVVRTKRFTMKPMDVEEAILQMNMVGHNFFVFSNIDTQEVN 172
Query: 38 IVYKRKEGGY 9
+VYKR +G Y
Sbjct: 173 VVYKRDDGKY 182
[206][TOP]
>UniRef100_Q9K6W6 Ribosomal protein S30AE family n=1 Tax=Bacillus halodurans
RepID=Q9K6W6_BACHD
Length = 187
Score = 82.0 bits (201), Expect = 3e-14
Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYL-VREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++ A++++VE KVG++ + V +V+VR+ EVT+ R +
Sbjct: 12 VTPALREYVEKKVGKLERYFDTTPVADVNVRMQVLNNLHI--------IEVTIPMSRL-L 62
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV ++R++RK K K R +G + F + P+ EE
Sbjct: 63 LRAEEKHSDMYAAIDLVIEKLERQIRKHKTKVNRKFRQ-EGSLKYMFKNDLEPMDGMREE 121
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+E +E++L +VVR K F++ P+ EAI Q++M+ H+F+ F N +G+ N+V
Sbjct: 122 ILLE------EEDDL--QVVRKKRFNLKPMDTEEAILQMDMLGHNFFVFSNAISGDTNVV 173
Query: 32 YKRKEGGY 9
Y+RK+G Y
Sbjct: 174 YRRKDGKY 181
[207][TOP]
>UniRef100_C4W9L5 Ribosomal subunit interface protein n=1 Tax=Staphylococcus warneri
L37603 RepID=C4W9L5_STAWA
Length = 191
Score = 82.0 bits (201), Expect = 3e-14
Identities = 53/188 (28%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ ++E+K+G++ + + + V V++ T T + EVT+ K
Sbjct: 13 ITDAIRNYIEEKIGKLERYFNNVPNAVAHVKVKTYSNS-------TTKVEVTIPLK-DVT 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y +DL+++ ++R++RK K + R +G + +EV E
Sbjct: 65 LRAEERHDDLYAGVDLITNKLERQVRKYKTRVNRKHRD-RGDQEVFVAEV-----QEAPP 118
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+EI + +D + E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV
Sbjct: 119 EEISGAEENNDNDI---EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 175
Query: 32 YKRKEGGY 9
Y+RK+G Y
Sbjct: 176 YRRKDGKY 183
[208][TOP]
>UniRef100_C4L5L1 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Exiguobacterium sp. AT1b RepID=C4L5L1_EXISA
Length = 187
Score = 81.6 bits (200), Expect = 4e-14
Identities = 59/187 (31%), Positives = 96/187 (51%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A+K +VE K+ ++ + Y D + + + ++ EVT+ + ++
Sbjct: 12 VTPAIKDYVEKKLEKLTR---YFTTPTDAQTAYVNLKVYNE---KQKVEVTI-PMPNLLL 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ Y +IDLV ++R++RK K K GR +G E L D+
Sbjct: 65 RAEDINLDMYAAIDLVVDKLERQIRKHKTKLNRKGRGKEGG----VGEYFKSLEGPDD-- 118
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
TP DE+E E+VRTK F + P+ EAI Q++M+ H F+ F + ETG N+VY
Sbjct: 119 ----TPAVYDEDEAELELVRTKRFTLKPMDTEEAILQMDMLGHSFFVFSDAETGNTNVVY 174
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 175 RRKDGKY 181
[209][TOP]
>UniRef100_C0M6F8 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Streptococcus equi subsp. equi 4047
RepID=C0M6F8_STRE4
Length = 182
Score = 81.6 bits (200), Expect = 4e-14
Identities = 59/185 (31%), Positives = 104/185 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ +VE K+ + I+K+ +E+D R++ + E +T + EVT+ +
Sbjct: 13 VTEAIRDYVESKLTK-IEKYFVEEQEIDARVNLKVYRE-----KTAKVEVTI-PLGSVTL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV I+R++RK K K R ++ S+V SE E +
Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-----KMSTSQVFT---SEFEAE 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ E TP+ +VVRTK + P+ V EA Q+E++ HDF+ + + E G N++Y
Sbjct: 118 KAEETPEI--------KVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDAEDGATNVLY 169
Query: 29 KRKEG 15
+R++G
Sbjct: 170 RREDG 174
[210][TOP]
>UniRef100_B7A6F1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Thermus
aquaticus Y51MC23 RepID=B7A6F1_THEAQ
Length = 186
Score = 81.6 bits (200), Expect = 4e-14
Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQ-KHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ +VE K+ R+ + ++ L+ +V + L+ E + + EV L G+
Sbjct: 13 ITDAIRDYVEKKLSRLDRYQNGELMAKVVLSLAGSPHVE-----KRAKAEVQLDLPG-GL 66
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHM-KGPNRLKFSEVILPLPSEDE 216
+R EE + Y +ID + ++ +L++ KE+ RH +GP P P +
Sbjct: 67 LRVEEEDQDLYAAIDRMVDRLEIQLKRYKERRFVGRRHTYQGP----------PPPEVRD 116
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
+ + + EEE +VR K F+M P+ EA+ Q+E + HDF+ FRN +T EIN+
Sbjct: 117 MEAL-----RKPEEEEGPRIVRVKRFEMKPMDPEEAVFQMEALGHDFFVFRNAKTDEINV 171
Query: 35 VYKRKEGGY 9
VY+RK+G Y
Sbjct: 172 VYRRKDGNY 180
[211][TOP]
>UniRef100_B7GE66 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7GE66_PHATR
Length = 209
Score = 81.6 bits (200), Expect = 4e-14
Identities = 67/194 (34%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQK--HSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHG 396
L+ A+ +HV ++G I K + ++E DV LS + G R EV K
Sbjct: 22 LTPALVEHVNKRIGGQINKLASNGAIQECDVILSVSKNPKVKNG---HRVEVVTNLKGTS 78
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETD--HGRHMKGPNRLKFSEVILPLPSE 222
++ E + Y SID S + RKL K K+ HG G + + EV+ E
Sbjct: 79 IICHNESPDM-YASIDAASHALYRKLCKYKDNRVAGWHGGEKMGNDIM---EVL-----E 129
Query: 221 DEEDEIEITPQKDDEEELIEE---VVRTKYFDMP-PLTVFEAIDQLEMVDHDFYAFRNEE 54
+ ED E T EE + E + + K FD+ P++V EA+ L+ +DHDFY FRN E
Sbjct: 130 NLEDVSEYTATPVAEEYVDPEAPTITKVKNFDLTKPMSVQEAVFALDYIDHDFYVFRNAE 189
Query: 53 TGEINIVYKRKEGG 12
T EI++VYKR GG
Sbjct: 190 TNEISVVYKRHVGG 203
[212][TOP]
>UniRef100_Q2YSH7 Uncharacterized protein SAB0704 n=35 Tax=Staphylococcus aureus
RepID=Y704_STAAB
Length = 190
Score = 81.6 bits (200), Expect = 4e-14
Identities = 52/188 (27%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ ++E+K+G++ + + + V V++ T + EVT+ K +
Sbjct: 13 ITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-NVT 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y IDL+++ ++R++RK K + R +G + +E+ E
Sbjct: 65 LRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAEL-------QEM 116
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E ++ D+ E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV
Sbjct: 117 QETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETDGTSIV 174
Query: 32 YKRKEGGY 9
Y+RK+G Y
Sbjct: 175 YRRKDGKY 182
[213][TOP]
>UniRef100_Q5HQX7 Uncharacterized protein SERP0419 n=3 Tax=Staphylococcus epidermidis
RepID=Y419_STAEQ
Length = 189
Score = 81.6 bits (200), Expect = 4e-14
Identities = 54/188 (28%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ ++E+KVG++ + + + V VR+ T T + EVT+ K
Sbjct: 13 ITDAIRNYIEEKVGKLERYFNNVPNAVAHVRVKTYSNS-------TTKIEVTIPLK-DVT 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y IDL+++ ++R++RK K + + +H ++ F + + +
Sbjct: 65 LRAEERHDDLYAGIDLITNKLERQVRKYKTRV--NRKHRDRGDQDIFVAEVQESTTNNHA 122
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
D+IE E ++ E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV
Sbjct: 123 DDIE------SENDI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 174
Query: 32 YKRKEGGY 9
Y+RK+G Y
Sbjct: 175 YRRKDGKY 182
[214][TOP]
>UniRef100_C9L411 Ribosomal subunit interface protein n=1 Tax=Blautia hansenii DSM
20583 RepID=C9L411_RUMHA
Length = 176
Score = 81.3 bits (199), Expect = 5e-14
Identities = 60/187 (32%), Positives = 97/187 (51%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ ++ VEDK+G+ ++K+ E+ V LS ++ EVT+ K + ++
Sbjct: 12 VTQGLRSAVEDKLGK-LEKYFTSDTEIIVTLSVE--------KERQKIEVTIPVKGN-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R+E+ + Y SIDLV II+R+LRK K K D + + +F E + EED
Sbjct: 62 RSEQVSSDMYVSIDLVEEIIERQLRKYKNKIID--KKQSAGFQPEFVE------KDYEED 113
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
EI +++RTK F P+ +A Q+E++ H+F+ F N ET E+N+VY
Sbjct: 114 TNEI------------KIIRTKKFGFKPMYPEDACVQMELLGHNFFVFLNAETEEVNVVY 161
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 162 KRKGNTY 168
[215][TOP]
>UniRef100_C5R7Z6 Ribosome-associated inhibitor protein Y n=1 Tax=Weissella
paramesenteroides ATCC 33313 RepID=C5R7Z6_WEIPA
Length = 238
Score = 81.3 bits (199), Expect = 5e-14
Identities = 58/191 (30%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQ----KHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKR 402
++DA+ +++E ++ R+ + + SY+ R V+VR G T + EVT+
Sbjct: 61 ITDAMSEYIEKRISRLERYLNTEASYIAR-VNVRSYKEG---------TFKTEVTIQLP- 109
Query: 401 HGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE 222
+ ++RAE+ Y ++D VS ++R++RK K K R KG L+ ++ + P+
Sbjct: 110 YLLLRAEDTQTDMYQTVDFVSDKLERQIRKYKTKVNRKSRE-KGYKGLENTDFMAVDPAA 168
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
E+ P+ +D+ E+VRTK+ D+ P+ V EA+ Q+E++ H+F+ F++ ET
Sbjct: 169 AVEE-----PEPEDDGL---EIVRTKHVDLKPMDVEEAVLQMELLGHEFFIFQDAETDLP 220
Query: 41 NIVYKRKEGGY 9
+VYKR++G Y
Sbjct: 221 AVVYKRRDGKY 231
[216][TOP]
>UniRef100_B7DUH5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alicyclobacillus acidocaldarius LAA1
RepID=B7DUH5_9BACL
Length = 180
Score = 81.3 bits (199), Expect = 5e-14
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 1/185 (0%)
Frame = -2
Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV-RA 384
A++++V+ K+ R+ + Y RE D ++ E R E+T++ +GV+ RA
Sbjct: 15 ALQEYVDKKIARLTR---YFDREADKQIYVTMAVE----GLDHRVEMTVFV--NGVIFRA 65
Query: 383 EEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEI 204
EE + Y SIDL + ++ ++ + KEK R +GP P + D +
Sbjct: 66 EEKSPDMYASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAV 115
Query: 203 EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24
T DDE + VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R
Sbjct: 116 AET---DDEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRR 168
Query: 23 KEGGY 9
+ G Y
Sbjct: 169 RSGDY 173
[217][TOP]
>UniRef100_A3DJE4 Sigma 54 modulation protein / SSU ribosomal protein S30P n=3
Tax=Clostridium thermocellum RepID=A3DJE4_CLOTH
Length = 177
Score = 81.3 bits (199), Expect = 5e-14
Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 3/190 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A+K+ KVG+ + K+ E + +S + EVT+ + G++
Sbjct: 12 VTEALKEAAVKKVGK-LDKYFRRDAEATITMSVQKNRHI--------VEVTIPFEG-GLL 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIK---EKETDHGRHMKGPNRLKFSEVILPLPSED 219
RAEE + Y SID V ++R++R+ K EK+ G L+F + +
Sbjct: 62 RAEEDSPDMYASIDKVIDSLERQIRRNKTKLEKKVHDGS-------LRFENI------KF 108
Query: 218 EEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
++DE+E P+ EVVRTK F + P+TV EAI Q+ ++ H F+ F N ET E N
Sbjct: 109 DDDEVEEEPKF--------EVVRTKKFAIKPMTVEEAILQMNLLGHQFFMFSNAETNEAN 160
Query: 38 IVYKRKEGGY 9
+VY+RK+G Y
Sbjct: 161 VVYRRKDGNY 170
[218][TOP]
>UniRef100_A8SVF0 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC
27759 RepID=A8SVF0_9FIRM
Length = 175
Score = 81.3 bits (199), Expect = 5e-14
Identities = 56/187 (29%), Positives = 99/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++ ++ V+DK+ ++ Y + +++ F ++ EVT+ K H ++
Sbjct: 12 VTEGLRNAVQDKLSKL---EKYFAADTGAQVT------FSVEKDRQKIEVTIPMKGH-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ Y SIDLV +I+R++ K ++K D K N +E + ED ED
Sbjct: 62 RAEQVSDDMYVSIDLVVEVIERQVTKHRKKLID-----KEQNVAYLNEAFV---DEDIED 113
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+ +I ++VRTK F + P+ +A Q++++ H+FY FRN ET E+N+VY
Sbjct: 114 DDDI------------KIVRTKKFAVKPMYPEDACIQMDLLGHNFYVFRNAETDEVNVVY 161
Query: 29 KRKEGGY 9
KRK Y
Sbjct: 162 KRKGNTY 168
[219][TOP]
>UniRef100_UPI00004C2450 COG1544: Ribosome-associated protein Y (PSrp-1) n=1
Tax=Streptococcus pyogenes M49 591 RepID=UPI00004C2450
Length = 182
Score = 80.9 bits (198), Expect = 6e-14
Identities = 59/185 (31%), Positives = 103/185 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ +VE K+ + I+K+ +E+D R++ + E R+ + EVT+ +
Sbjct: 13 VTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVEVTIPLDSV-TL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV I+R++RK K K R K P F+ +E E +
Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-------TEFEAE 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E++ P+ +VVRTK + P+ V EA Q+E++ HDF+ + + E G NI+Y
Sbjct: 118 EVDEIPEV--------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSENGATNILY 169
Query: 29 KRKEG 15
+R++G
Sbjct: 170 RREDG 174
[220][TOP]
>UniRef100_B8FYZ1 Sigma 54 modulation protein/ribosomal protein S30EA n=2
Tax=Desulfitobacterium hafniense RepID=B8FYZ1_DESHD
Length = 175
Score = 80.9 bits (198), Expect = 6e-14
Identities = 62/187 (33%), Positives = 94/187 (50%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA+K++V +VG+ ++K+S +V V L G R EVT + ++
Sbjct: 12 VTDALKEYVLKRVGK-LEKYSDEFMDVKVTLLVEEG--------RHRVEVTAPLQGM-IL 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R EE + Y SIDLV ++R++ K + + R LK E+ P ED+
Sbjct: 62 RGEEESGDMYASIDLVVEKLERQIDKYRTRINKRMR----TKVLKDHEIEHPALYEDDS- 116
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
EEVVR K F P++V EAI Q+ +V H+FYAF N +T IN+VY
Sbjct: 117 ---------------EEVVRHKKFGTKPMSVEEAIMQMNLVGHNFYAFTNMDTNVINVVY 161
Query: 29 KRKEGGY 9
+R+ G Y
Sbjct: 162 RRRSGDY 168
[221][TOP]
>UniRef100_B2A816 Sigma 54 modulation protein, SSU ribosomal protein S30P n=1
Tax=Natranaerobius thermophilus JW/NM-WN-LF
RepID=B2A816_NATTJ
Length = 178
Score = 80.9 bits (198), Expect = 6e-14
Identities = 56/187 (29%), Positives = 89/187 (47%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A+K+H++ + + + KH E V LS E T++ +V
Sbjct: 14 VTNALKEHIQRRFAK-LDKHFDDTVEAQVTLSVIKDNH--------NVEATMFLNGGMLV 64
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R E+ Y S+D V ++R+++K K K R G L E E
Sbjct: 65 RGEQSTGDMYASVDQVIDKVERQIKKHKTKINRKLRQSGGS-----------LLKEGAES 113
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
EE E+V+TK F + P+T EA+ Q+E++ HDF+ FRN ET E+N+VY
Sbjct: 114 T---------EEGKDPEIVKTKRFAIKPMTPEEAVLQMELIGHDFFVFRNAETEEVNVVY 164
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 165 RRKDGNY 171
[222][TOP]
>UniRef100_A3CPW1 30S ribosomal interface protein S30EA, putative n=1
Tax=Streptococcus sanguinis SK36 RepID=A3CPW1_STRSV
Length = 180
Score = 80.9 bits (198), Expect = 6e-14
Identities = 57/185 (30%), Positives = 104/185 (56%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ +V K+ + I+K+ +E+D R++ + E +T + EVT+ +
Sbjct: 13 VTDALRDYVVSKLEK-IEKYFQAEQELDARVNLKVYRE-----KTAKVEVTIPLGSI-TL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV+ I+R++RK K K ++ NR K + L S EE
Sbjct: 66 RAEDISQDMYGSIDLVTDKIERQIRKNKTK-------IERKNRNKVATSQLFTDSFAEE- 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
EE+ +VVR+K+ D+ P+ + EAI Q++++ HDF+ + + E N++Y
Sbjct: 118 ----------AEEVPSKVVRSKHIDLKPMDLEEAILQMDLLGHDFFIYSDAEDSSTNVIY 167
Query: 29 KRKEG 15
+R++G
Sbjct: 168 RREDG 172
[223][TOP]
>UniRef100_C4GCR0 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles
DSM 14600 RepID=C4GCR0_9FIRM
Length = 176
Score = 80.9 bits (198), Expect = 6e-14
Identities = 63/187 (33%), Positives = 93/187 (49%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L+D +K VED + K RE + T + G+ R E+T+ K G+V
Sbjct: 12 LTDGLKSAVED----ALSKLDRYFREDTLAHVTMSVDKAGQ-----RVELTIPVKG-GIV 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R E+ + Y SID S I+ +L K + K D R KG +L E+ D
Sbjct: 62 RCEKTTDDMYVSIDAASEGIEDQLTKYRHKLVD--RAHKG--------AVLNAAFEEGFD 111
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E D+EEE+ ++VRTK FD+ P+ +A Q+E++ H F+ F N ET +N+VY
Sbjct: 112 E-------DEEEEI--KIVRTKKFDLKPMYAEDACAQMELLGHSFFVFTNAETDAVNVVY 162
Query: 29 KRKEGGY 9
+RK G Y
Sbjct: 163 RRKNGSY 169
[224][TOP]
>UniRef100_C6VLR5 Ribosomal protein S30EA n=3 Tax=Lactobacillus plantarum
RepID=C6VLR5_LACPJ
Length = 188
Score = 80.9 bits (198), Expect = 6e-14
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 4/191 (2%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVD----VRLSTRGGGEFGRGPRTRRCEVTLYTKR 402
++ A++ +V+ +VG++ Y VD V L +T + EVT+
Sbjct: 13 VTQAIRDYVQKRVGKL---QKYFDNNVDSIAHVNLKVHPD-------KTAKVEVTIPLP- 61
Query: 401 HGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSE 222
+ V+RAEE + Y S+DLV+ ++R++RK K K R KG + F+
Sbjct: 62 YLVLRAEETSPDMYASVDLVTDKLERQIRKYKTKVNRKSRE-KGYKAIDFAAT------- 113
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
DE D +++L +VVRTK + P+ EAI Q++M+ HDF+ + + ET I
Sbjct: 114 ---DETVAAADNDQDDKL--DVVRTKRVALKPMDNEEAILQMDMLGHDFFIYEDAETDAI 168
Query: 41 NIVYKRKEGGY 9
NIVY+R +G Y
Sbjct: 169 NIVYRRNDGRY 179
[225][TOP]
>UniRef100_C2C307 Ribosome-associated inhibitor protein Y n=1 Tax=Listeria grayi DSM
20601 RepID=C2C307_LISGR
Length = 189
Score = 80.9 bits (198), Expect = 6e-14
Identities = 55/189 (29%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++ ++ +VE K+ + ++++ + +V ++ + + ++ + EVT+ V+
Sbjct: 13 VTEPIRDYVEKKIDK-LERYFNETPDANVHVNLKVYSD-----KSAKVEVTIPLPNL-VL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR--LKFSEVILPLPSEDE 216
RAEE Y S+DL++ ++R++RK K K R KG + FSE+ PSE+
Sbjct: 66 RAEETNGDLYASVDLIADKLERQIRKHKTKVNRKFRD-KGSEKDYFAFSEINDSTPSEET 124
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
+ + +I E+VRTK F + P+ EA+ Q+ ++ H+F+ F + ET NI
Sbjct: 125 DSDYDI------------EIVRTKSFSLKPMDSEEAVLQMNLLGHNFFVFNDAETNGTNI 172
Query: 35 VYKRKEGGY 9
VYKRK+G Y
Sbjct: 173 VYKRKDGKY 181
[226][TOP]
>UniRef100_Q5HHR8 Uncharacterized protein SACOL0815 n=1 Tax=Staphylococcus aureus
subsp. aureus COL RepID=Y815_STAAC
Length = 190
Score = 80.9 bits (198), Expect = 6e-14
Identities = 52/188 (27%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ ++E+K+G++ + + + V V++ T + EVT+ K +
Sbjct: 13 ITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-NVT 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y IDL+++ ++R++RK K + R +G + +E+ E
Sbjct: 65 LRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRD-RGDQEVFVAEL-------QEM 116
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E ++ D+ E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV
Sbjct: 117 QETQVDNDAYDDNEI--EIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFIDRETDGTSIV 174
Query: 32 YKRKEGGY 9
Y+RK+G Y
Sbjct: 175 YRRKDGKY 182
[227][TOP]
>UniRef100_UPI000196CE6C hypothetical protein CATMIT_02221 n=1 Tax=Catenibacterium mitsuokai
DSM 15897 RepID=UPI000196CE6C
Length = 193
Score = 80.5 bits (197), Expect = 8e-14
Identities = 53/187 (28%), Positives = 104/187 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA++ + K+ ++ K+ + ++V+ ++ R P ++ EVT+ T+ + ++
Sbjct: 27 ITDAIEDKITKKLA-LLDKYFIMGQDVEAKVLIR------TYPFGQKIEVTIPTE-YVLL 78
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE ++ Y +IDLV ++R++RK K K + ++ N+L F+ L E EE+
Sbjct: 79 RAEETSDDLYEAIDLVIDKLERQIRKYKTKLSRKSKN----NKLAFNINTLEALEEPEEE 134
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
++ VV+TK + P+ + EAI Q+E++ H F+ +++ ET +VY
Sbjct: 135 DV---------------VVKTKTINPKPMDMEEAIMQMELIGHSFFVYKDIETNTACVVY 179
Query: 29 KRKEGGY 9
KR++GGY
Sbjct: 180 KRRDGGY 186
[228][TOP]
>UniRef100_C8WT44 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446 RepID=C8WT44_ALIAC
Length = 180
Score = 80.5 bits (197), Expect = 8e-14
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 1/185 (0%)
Frame = -2
Query: 560 AVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV-RA 384
A++ +V+ K+ R+ + Y RE D ++ E R E+T++ +GV+ RA
Sbjct: 15 ALQDYVDKKIARLTR---YFDREADKQIYVTMAVE----GLDHRVEMTVFV--NGVIFRA 65
Query: 383 EEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEI 204
EE + Y SIDL + ++ ++ + KEK R +GP P + D +
Sbjct: 66 EEKSPDMYASIDLATDKLEEQIHRYKEKLNRRFR-ARGPR---------PQLKAADRDAV 115
Query: 203 EITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKR 24
T DDE + VVR K F + P+ V EA+ Q+E++ HDF+ F N ET E+N+VY+R
Sbjct: 116 AET---DDEIK----VVRVKRFPIKPMDVEEAVLQMELLGHDFFVFMNAETEEVNVVYRR 168
Query: 23 KEGGY 9
+ G Y
Sbjct: 169 RSGDY 173
[229][TOP]
>UniRef100_C8P6S3 Ribosomal subunit interface protein n=1 Tax=Lactobacillus antri DSM
16041 RepID=C8P6S3_9LACO
Length = 179
Score = 80.5 bits (197), Expect = 8e-14
Identities = 50/144 (34%), Positives = 81/144 (56%)
Frame = -2
Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261
RT + EVT+ + +RAEE + YGS+DLV+ ++R++RK K K R KG
Sbjct: 50 RTYKVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGLKN 107
Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81
L+F +PS+D+ E+ ++VRTK + P+ EA+ Q++M+ H
Sbjct: 108 LEF------VPSDDDAASDEL------------KIVRTKQVSLKPMDPEEAVLQMDMLGH 149
Query: 80 DFYAFRNEETGEINIVYKRKEGGY 9
DF+ F++ ET +IVY+R++G Y
Sbjct: 150 DFFVFQDAETNGTSIVYRRRDGRY 173
[230][TOP]
>UniRef100_C6PFL3 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Thermoanaerobacter italicus Ab9 RepID=C6PFL3_9THEO
Length = 181
Score = 80.5 bits (197), Expect = 8e-14
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 5/189 (2%)
Frame = -2
Query: 560 AVKQHVEDKVGRVIQKHS-YLVREVDVR--LSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
AV + D V + + K S Y + +VR LS + E+T+ K G++
Sbjct: 12 AVTDGLRDAVVKKVSKLSKYFTEDTEVRTVLSVQKNHHIA--------EITIPFK--GII 61
Query: 389 -RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVI-LPLPSEDE 216
RAEE ++ YGSID V I+R++ K K K NR +E I +PS +
Sbjct: 62 FRAEEVSDDMYGSIDRVVDKIERQILKHKTKLK---------NRFGANESIRFEIPSVYQ 112
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
E K++EEE E+V+TK F + P++ EAI Q+ ++ H+F+ F N +T IN+
Sbjct: 113 E-------AKEEEEETSFEIVKTKRFPIKPMSAEEAILQMNLLGHNFFVFTNADTDTINV 165
Query: 35 VYKRKEGGY 9
VYKRK+G Y
Sbjct: 166 VYKRKDGKY 174
[231][TOP]
>UniRef100_C6LIX7 Ribosomal subunit interface protein n=1 Tax=Bryantella
formatexigens DSM 14469 RepID=C6LIX7_9FIRM
Length = 176
Score = 80.5 bits (197), Expect = 8e-14
Identities = 58/188 (30%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++ ++ V DK+G+ ++++ E+ V +S ++ EVT+ K + ++
Sbjct: 12 ITEGLRTTVMDKLGK-LERYFTPDTEIIVTMSVE--------KERQKIEVTIPVKGN-II 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPN-RLKFSEVILPLPSEDEE 213
R+E+ + Y SIDLV +I+R+LRK K K +H +G N R +F E +E
Sbjct: 62 RSEQVSNDMYVSIDLVEEVIERQLRKYKNKLI--AKHQEGSNFRREFIE---------KE 110
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+ +E EE+ ++RTK+F + P+ +A Q+E++ H+F+ F N ET E+N+V
Sbjct: 111 ETVE-------PEEV--NIIRTKHFGIKPMYPEDACIQMELLGHNFFVFCNAETEEVNVV 161
Query: 32 YKRKEGGY 9
YKRK Y
Sbjct: 162 YKRKGNTY 169
[232][TOP]
>UniRef100_B2TK14 Ribosome-associated protein Y n=3 Tax=Clostridium botulinum
RepID=B2TK14_CLOBB
Length = 177
Score = 80.5 bits (197), Expect = 8e-14
Identities = 56/187 (29%), Positives = 100/187 (53%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
L++A+++ VE K+ + + K+ E LS + R R+ + V+
Sbjct: 12 LTNALREMVEKKISK-LGKYFNSDIEAKATLSVQ---------RNRQIVEVMIPFNGVVL 61
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R EE E Y +IDLV+ ++R++RK K K + K LKF E++
Sbjct: 62 RGEEANEDMYRAIDLVAEKLERQIRKQKTKLS-----RKKSGSLKFGEIV---------- 106
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
+++P DEEE ++V+ K F + P+ + EAI Q+E+V H+F+ +++ ++ +IN++Y
Sbjct: 107 --DLSPVAVDEEEA--KLVKRKRFGVKPMDIDEAILQMELVGHNFFVYQDVDSNKINVIY 162
Query: 29 KRKEGGY 9
KRK+G Y
Sbjct: 163 KRKDGDY 169
[233][TOP]
>UniRef100_Q5XAQ7 Ribosome-associated factor Y n=10 Tax=Streptococcus pyogenes
RepID=RAFY_STRP6
Length = 182
Score = 80.5 bits (197), Expect = 8e-14
Identities = 59/185 (31%), Positives = 103/185 (55%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ +VE K+ + I+K+ +E+D R++ + E R+ + EVT+ +
Sbjct: 13 VTEAIRDYVESKLTK-IEKYFAKDQEIDARVNLKVYRE-----RSSKVEVTIPLDSV-TL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAE+ ++ YGSIDLV I+R++RK K K R K P F+ +E E +
Sbjct: 66 RAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKHRE-KVPTGQVFT-------TEFEAE 117
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E++ P+ +VVRTK + P+ V EA Q+E++ HDF+ + + E G NI+Y
Sbjct: 118 EVDEIPEV--------QVVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGATNILY 169
Query: 29 KRKEG 15
+R++G
Sbjct: 170 RREDG 174
[234][TOP]
>UniRef100_Q1WSW6 Ribosome-associated factor Y n=1 Tax=Lactobacillus salivarius
UCC118 RepID=Q1WSW6_LACS1
Length = 184
Score = 80.1 bits (196), Expect = 1e-13
Identities = 51/144 (35%), Positives = 81/144 (56%)
Frame = -2
Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261
+T + EVT+ + V+RAEE + Y SIDLV+ ++R++RK K K R KG
Sbjct: 50 KTAKVEVTIPLP-YLVLRAEETSPDMYASIDLVTDKLERQIRKYKTKVNRKSRE-KGFKN 107
Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81
+F+ P DE++E+E + E+VRTK + P+ EA+ Q++M+ H
Sbjct: 108 FEFA------PVADEKEEVE---------DKKFEIVRTKRLSLKPMDSEEAVLQMDMLGH 152
Query: 80 DFYAFRNEETGEINIVYKRKEGGY 9
DF+ + + E G I IVY+R++G Y
Sbjct: 153 DFFIYEDAENGGIYIVYRRRDGRY 176
[235][TOP]
>UniRef100_B8CYM6 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Halothermothrix orenii H 168 RepID=B8CYM6_HALOH
Length = 184
Score = 80.1 bits (196), Expect = 1e-13
Identities = 53/187 (28%), Positives = 93/187 (49%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A+K++ +KV ++ + +E + + G EVT Y ++
Sbjct: 12 VTPALKEYAIEKVSKLGKYFDGEPQEAHISMEVEKGRHI--------VEVTAYLNGL-IL 62
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
R EE ++ Y SID V ++R++ K K K R K + ++ E + +
Sbjct: 63 RGEEESQDMYASIDGVLEKLERQVHKYKTKINRKIRERKQEFKKEYKE--------ERRE 114
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
EI +E+E +VRTK F + P++V EA Q++++ HDF+ F N T ++N+VY
Sbjct: 115 EI----LNSEEDEFKPRIVRTKKFAIKPMSVEEAAMQMDLLGHDFFVFTNANTEQVNVVY 170
Query: 29 KRKEGGY 9
KRK+G Y
Sbjct: 171 KRKDGNY 177
[236][TOP]
>UniRef100_C5VNV1 Ribosomal subunit interface protein n=1 Tax=Clostridium botulinum D
str. 1873 RepID=C5VNV1_CLOBO
Length = 178
Score = 80.1 bits (196), Expect = 1e-13
Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Frame = -2
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEK--ETDHGRHMKGPNRLKFSEVILPLPSE 222
++RAEE Y +IDLV ++R++RK K K + HG + LKF + +P
Sbjct: 60 ILRAEEANNDMYAAIDLVLEKLERQIRKQKTKLEKRKHG------DALKFQFIPEYIP-- 111
Query: 221 DEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEI 42
KD E+ + ++V+TK F + P++ EA+ Q+E++ H+F+ FRN +T E+
Sbjct: 112 -----------KDAEDNVESKIVKTKKFAVKPMSNEEAVLQMELLGHNFFVFRNSDTDEV 160
Query: 41 NIVYKRKEGGY 9
N++YKRK+G Y
Sbjct: 161 NVLYKRKDGQY 171
[237][TOP]
>UniRef100_C5NVZ2 Ribosome-associated factor Y n=1 Tax=Gemella haemolysans ATCC 10379
RepID=C5NVZ2_9BACL
Length = 181
Score = 80.1 bits (196), Expect = 1e-13
Identities = 57/187 (30%), Positives = 102/187 (54%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++ A++++VE+KV + ++K+ E +V + + ++ E+T+ R +
Sbjct: 13 ITQAIREYVENKVSK-LEKYFADSLEANVYANAKVYKN-----NKKKIEITV-PLRGVTL 65
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE E Y ++DLV ++R++RK K K GR KG F+E
Sbjct: 66 RAEETNEDLYAAVDLVVDKLERQMRKHKTKINRKGRE-KG-----FAE------------ 107
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
EI +T + ++ EE ++ + K + P+T EA+ Q+E++ HDF+AF + T EI++VY
Sbjct: 108 EIILTSELEEAEETTLDLGKVKQLKVEPMTREEAVFQMELLGHDFFAFLDNTTNEISVVY 167
Query: 29 KRKEGGY 9
KR++ GY
Sbjct: 168 KRRDTGY 174
[238][TOP]
>UniRef100_C3GRH2 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1 RepID=C3GRH2_BACTU
Length = 180
Score = 80.1 bits (196), Expect = 1e-13
Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTL-YTKRHGV 393
++ A+K++V K+ + ++++ E+ V L + R EVT+ +T +
Sbjct: 12 VTPALKEYVGKKLSK-LERYFDTFPEIKVNLKVYSDKQ--------RVEVTIPFTDL--L 60
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE Y +IDLV ++R++RK K K R KG + F ILP
Sbjct: 61 LRAEETNSDMYAAIDLVVDKLERQIRKHKTKVNRKLRE-KGSMKTNF---ILP------- 109
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E D EE E+VRTK FD+ P+ V EAI Q++M+ H+F+ F N +T E N+V
Sbjct: 110 ---EAVAVLDAVEEDELELVRTKRFDLKPMDVEEAILQMDMLGHNFFVFTNADTNETNVV 166
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 167 YGRKDGKY 174
[239][TOP]
>UniRef100_C1P990 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Bacillus coagulans 36D1 RepID=C1P990_BACCO
Length = 187
Score = 80.1 bits (196), Expect = 1e-13
Identities = 56/188 (29%), Positives = 103/188 (54%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGP-RTRRCEVTLYTKRHGV 393
++ A++ ++E KV ++ + Y V D ++ + P +T + E+T+ + V
Sbjct: 13 VTPAIRDYIEKKVNKLDR---YFVETPDTSVNVK----LKVNPDKTSKVEITIPMPQV-V 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE E Y +IDL++ ++R++RK K K R KG R F+ L +
Sbjct: 65 LRAEETNEDMYAAIDLIADKLERQIRKHKTKVNRKLRE-KGSTRELFTTPDTGLKEKQA- 122
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
+K+++ EL ++VRTK+F++ P+ EA+ Q+ ++ H+F+ + + ET NIV
Sbjct: 123 -------RKEEDSEL--QIVRTKHFNLKPMDSEEAVLQMNLLGHNFFIYTDAETNHTNIV 173
Query: 32 YKRKEGGY 9
Y+RK+G Y
Sbjct: 174 YRRKDGKY 181
[240][TOP]
>UniRef100_C0VBX3 SSU ribosomal protein S30P n=1 Tax=Xylanimonas cellulosilytica DSM
15894 RepID=C0VBX3_9MICO
Length = 216
Score = 80.1 bits (196), Expect = 1e-13
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 4/186 (2%)
Frame = -2
Query: 554 KQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVRAEEH 375
++HVEDK+ +V Q S LV+ VDV ++ + R E+T+ K V+RAE
Sbjct: 17 RRHVEDKLTKVTQL-SPLVQRVDVEVTHENNPKLS--DVRERVELTVRAKGP-VIRAEAA 72
Query: 374 AETTYGSIDLVSSIIQRKLRKIKEKETDHGR-HMKGPNRLK-FSEVILPLPSEDEEDEIE 201
A+ YG++DL + +LR+ +++ DH R ++ P ++ + EV P P E EE
Sbjct: 73 ADDRYGALDLAIDKLIERLRRSRDRRKDHRRTYVTAPVDVRPYDEVRSPEP-EPEESVPL 131
Query: 200 ITPQKDDEEELIEE--VVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYK 27
+ + E +L + V+R K +TV +A+ ++E+V HDF+ F ++ET + VYK
Sbjct: 132 VVDGEAVEHQLGDSPVVIRQKLHSADAMTVDDAVYEMELVGHDFFLFIDKETARPSAVYK 191
Query: 26 RKEGGY 9
RK Y
Sbjct: 192 RKGWTY 197
[241][TOP]
>UniRef100_B9ND14 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ND14_POPTR
Length = 102
Score = 80.1 bits (196), Expect = 1e-13
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 14/101 (13%)
Frame = -2
Query: 314 KIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDEIEITPQKDDE--EELI-------- 165
KIK+KE+DHGRHMKG N+ K E P+ E D ++ +KDD+ +EL
Sbjct: 2 KIKDKESDHGRHMKGFNKFKVRE---PMSQVVENDADTVSQRKDDDNLDELFYMHLVTIH 58
Query: 164 ----EEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEE 54
V TKYFDMPP+TV EAI +L VDH FY FR+ E
Sbjct: 59 SIISSNAVHTKYFDMPPVTVDEAIVRLGNVDHAFYGFRHAE 99
[242][TOP]
>UniRef100_A0Q2Y0 Ribosomal subunit interface protein n=1 Tax=Clostridium novyi NT
RepID=A0Q2Y0_CLONN
Length = 178
Score = 79.7 bits (195), Expect = 1e-13
Identities = 44/129 (34%), Positives = 75/129 (58%)
Frame = -2
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
++RAE+ Y +ID+V ++R++RK K K + K + LKF + +P
Sbjct: 60 ILRAEDSNSDMYAAIDIVLEKLERQIRKQKTKL----QRRKHGDALKFQFIPEYVP---- 111
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
KDDE+ + ++V+TK F + P++ EA+ Q+E++ H+F+ F N ET E+N+
Sbjct: 112 ---------KDDEDNIESKIVKTKRFAIKPMSREEAVLQMELLGHNFFVFTNAETEEVNV 162
Query: 35 VYKRKEGGY 9
+YKRK+G Y
Sbjct: 163 LYKRKDGQY 171
[243][TOP]
>UniRef100_C6J2M0 Ribosomal subunit interface protein n=1 Tax=Paenibacillus sp. oral
taxon 786 str. D14 RepID=C6J2M0_9BACL
Length = 183
Score = 79.7 bits (195), Expect = 1e-13
Identities = 51/129 (39%), Positives = 70/129 (54%)
Frame = -2
Query: 395 VVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDE 216
V+RAE+ ++ Y SID V ++R++RK K K R N L + + DE
Sbjct: 62 VLRAEDRSDDMYASIDAVVDKLERQIRKHKTKINRKLRQKGVKNSLFVEDATTGSVALDE 121
Query: 215 EDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINI 36
EEEL EVVRTK F + P+ V EAI Q+ MV H+F+ F N +T E+N+
Sbjct: 122 -----------GEEEL--EVVRTKRFTLKPMDVEEAILQMNMVGHNFFVFSNIDTKEVNV 168
Query: 35 VYKRKEGGY 9
VYKR +G Y
Sbjct: 169 VYKRNDGKY 177
[244][TOP]
>UniRef100_C2ETD9 Ribosome-associated inhibitor protein Y n=1 Tax=Lactobacillus
vaginalis ATCC 49540 RepID=C2ETD9_9LACO
Length = 189
Score = 79.7 bits (195), Expect = 1e-13
Identities = 50/144 (34%), Positives = 84/144 (58%)
Frame = -2
Query: 440 RTRRCEVTLYTKRHGVVRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNR 261
RT + EVT+ + +RAEE + YGS+DLV+ ++R++RK K K R KG
Sbjct: 59 RTYKVEVTIPLP-YLTLRAEETSNDMYGSVDLVTDKLERQIRKYKTKVNRKSRE-KGFKS 116
Query: 260 LKFSEVILPLPSEDEEDEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDH 81
L+F +P++D+ + +++L ++VRTK + P+ EA+ Q++M+ H
Sbjct: 117 LEF------VPTDDDAES---------QDDL--KIVRTKQISLKPMDPEEAVLQMDMLGH 159
Query: 80 DFYAFRNEETGEINIVYKRKEGGY 9
DF+ F++ ET +IVY+RK+G Y
Sbjct: 160 DFFVFQDAETDGTSIVYRRKDGRY 183
[245][TOP]
>UniRef100_C2AF84 SSU ribosomal protein S30P; sigma 54 modulation protein n=1
Tax=Thermomonospora curvata DSM 43183 RepID=C2AF84_THECU
Length = 221
Score = 79.7 bits (195), Expect = 1e-13
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 19/206 (9%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++D ++HV++K+ + I++ + + VDV +S R R E+T+ + R V+
Sbjct: 12 VNDRFREHVDNKLAK-IERFARKIIRVDVEVSEEHNPRLA--DRRERVELTIRS-RGPVI 67
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDH-GRHMKGPNRLKFSEVILPLPSE-DE 216
RAE AE YG++DL ++ +LR+ ++ H + P +L E + P+
Sbjct: 68 RAEAAAEDRYGALDLALDKLEARLRRSADRRKIHYNSGTRAPAKLAHLEPLTEPPAAAPP 127
Query: 215 EDEIEITPQKDDEE--ELIEE---------------VVRTKYFDMPPLTVFEAIDQLEMV 87
ED E P + E EE VVR K+ P+T+ +A+ ++E+V
Sbjct: 128 EDSAEGAPAAEPAAATEPAEEGGNVVPIAMDGDGPLVVREKFHRSAPMTIDQALYEMELV 187
Query: 86 DHDFYAFRNEETGEINIVYKRKEGGY 9
HDF+ FR++E G ++VY+RK Y
Sbjct: 188 GHDFFLFRDKENGHPSVVYRRKGWNY 213
[246][TOP]
>UniRef100_C1V2G6 SSU ribosomal protein S30P n=1 Tax=Haliangium ochraceum DSM 14365
RepID=C1V2G6_9DELT
Length = 207
Score = 79.7 bits (195), Expect = 1e-13
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Frame = -2
Query: 566 SDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVVR 387
++A+K++ D++ R I+K+ V V +ST G + R +VT+ V
Sbjct: 13 TEALKEYARDRMER-IKKYFPDPISVHVVMSTERGYK-------HRVDVTMQLHNGLTVA 64
Query: 386 AEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEEDE 207
E +E+ + SIDLV++ I+R++R+ K+K H P+ + +S +L + E +
Sbjct: 65 GRETSESMHSSIDLVTAKIERQVRRYKDKLRTHKVKNHIPS-VPWSHTVLSDSESENESQ 123
Query: 206 IEITPQKDDEEELIEE----VVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEIN 39
+ + D E + VVRT+ F P++V EAI QL + F FR++E+G +N
Sbjct: 124 VAEGAELDVAAEAVAGAEHIVVRTEKFHADPMSVSEAIMQLNLGGQQFLVFRHDESGRVN 183
Query: 38 IVYKRKEGGY 9
+VY R +G Y
Sbjct: 184 VVYHRGDGSY 193
[247][TOP]
>UniRef100_B9CQX8 Ribosomal subunit interface protein n=1 Tax=Staphylococcus capitis
SK14 RepID=B9CQX8_STACP
Length = 191
Score = 79.7 bits (195), Expect = 1e-13
Identities = 53/188 (28%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREV-DVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGV 393
++DA++ ++EDK+G++ + + + V V++ T + EVT+ K
Sbjct: 13 ITDAIRNYIEDKIGKLERYFNNVPNAVAHVKVKTYSNS-------ATKIEVTIPLK-DVT 64
Query: 392 VRAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEE 213
+RAEE + Y IDL++ ++R++RK K + R +G + +EV E
Sbjct: 65 LRAEERHDDLYAGIDLITGKLERQVRKYKTRVNRKHRD-RGDQEVFVAEV-----QEASP 118
Query: 212 DEIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIV 33
E+ + + E+ E++R+K F + P+ EA+ Q+ ++ HDF+ F + ET +IV
Sbjct: 119 GEVSGAEESVSDSEI--EIIRSKQFSLKPMDSEEAVLQMNLLGHDFFIFTDRETDGTSIV 176
Query: 32 YKRKEGGY 9
Y RK+G Y
Sbjct: 177 YTRKDGKY 184
[248][TOP]
>UniRef100_B9NGT0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NGT0_POPTR
Length = 71
Score = 79.7 bits (195), Expect = 1e-13
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = -2
Query: 134 MPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVYKRKEGGY 9
MPPLTV EAI+QLE VDHDFY FRNEETGEINIVYKRK GGY
Sbjct: 1 MPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGY 42
[249][TOP]
>UniRef100_A4XJ41 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Caldicellulosiruptor saccharolyticus DSM 8903
RepID=A4XJ41_CALS8
Length = 182
Score = 79.3 bits (194), Expect = 2e-13
Identities = 50/187 (26%), Positives = 92/187 (49%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
++DA+K +E K+ + ++++ + +V V LS + R ++
Sbjct: 13 VTDALKDRIEKKLSK-LERYVKMNCDVHVTLSVE---------KIRHIVEVTIPFYGMIL 62
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE + Y +IDLV ++R++RK K K + + + F E +++E
Sbjct: 63 RAEEASNDMYSAIDLVVDSLERQIRKFKTKIAKRAKDAESLRYMTFEEEAQQETNQEENG 122
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E +I +TK F + P++V EAI Q+ ++ H F+ F N++T ++N+VY
Sbjct: 123 EFKIA--------------KTKRFPIKPMSVDEAILQMNLLGHSFFVFLNQDTDKVNVVY 168
Query: 29 KRKEGGY 9
KR +G Y
Sbjct: 169 KRNDGAY 175
[250][TOP]
>UniRef100_C0X601 Ribosome-associated inhibitor protein Y n=22 Tax=Enterococcus
faecalis RepID=C0X601_ENTFA
Length = 189
Score = 79.3 bits (194), Expect = 2e-13
Identities = 57/187 (30%), Positives = 99/187 (52%)
Frame = -2
Query: 569 LSDAVKQHVEDKVGRVIQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLYTKRHGVV 390
+++A++ +VE KVG+ ++++ E V ++ + E +T + EVT+ + V+
Sbjct: 19 VTEAIRDYVEKKVGK-LERYFSDSPEATVHVNLKVYTE-----KTAKVEVTIPLP-YLVL 71
Query: 389 RAEEHAETTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGPNRLKFSEVILPLPSEDEED 210
RAEE + Y SIDLV ++R++RK K K R G N K + ++ +E+
Sbjct: 72 RAEETSPDLYASIDLVVDKLERQIRKFKTKINRKSRET-GRNNTKAAVFLVGEETEETPS 130
Query: 209 EIEITPQKDDEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVDHDFYAFRNEETGEINIVY 30
E++I VRTK + P+ EA+ Q+ M+ H+F+ F + ET +IVY
Sbjct: 131 ELDI--------------VRTKRLSLKPMDSEEAVLQMNMLGHNFFIFEDAETNGTSIVY 176
Query: 29 KRKEGGY 9
+RK+G Y
Sbjct: 177 RRKDGKY 183